|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1924090..1925546- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_17580-T1 ID=ATCC64974_17580-T1|Name=ATCC64974_17580-T1|organism=Aspergillus niger N402|type=mRNA|length=1457bp|location=Sequence derived from alignment at OGUI01000003.1:1924090..1925546- (Aspergillus niger N402)
ATGGCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCCCAGTCCGC
AGCGTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAGAATGCTTG
GTATAGATCCCCAATGCCCTCAGCCAGTATCCTTATACCTAATAGCCTTC
AAGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATC
TTCTTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAG
AGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATCT
CCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTC
CTGTCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACTTCAA
AGAATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATCA
TCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATT
CGCAAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCC
CACGGTCGAAGACGTCGTTTTCGCCGCAAGGACGCAGATGGGCGTTATAG
AGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGAAG
GAGTACATTCGCGGTCTGCACGAAGGTTGGCTGGGTCCTCTTGATCCTCC
CCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACAC
CCGCCGCAGAGGCCGCCTCTGAGACCAAGGAGGGCGATGCCAATGCCCCC
GAGCAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACC
AGCTTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACTA
TCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCTG
GGTTTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCA
CATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCAT
ACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATC
TCCGACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCCTCGA
GGAGGAAGAAAAGGAATGGCACAAGTCCGTCCACCGCAAGGACGAAGCAA
ACCCTGACAAGGAACGCGAATGGCTCGACGACATCGTCATCGACCCGCGC
CTCGCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCG
CGCTCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGCC
CTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGGA
GAGGATGAGGAGACGTTGAGGAGGAAGCCTATCTTGGGCAACCTTGATGA
GGATTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1924090..1925546- >ATCC64974_17580-T1 ID=ATCC64974_17580-T1|Name=ATCC64974_17580-T1|organism=Aspergillus niger N402|type=CDS|length=2808bp|location=Sequence derived from alignment at OGUI01000003.1:1924090..1925546- (Aspergillus niger N402)
GAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATCTTC
TTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAGAGA
GAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATCTCCA
AGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTCCTG
TCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACTTCAAAGA
ATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATCATCG
AAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATTCGC
AAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCCCAC
GGTCGAAGACGTCGTTTTCGCCGCAAGGACGCAGATGGGCGTTATAGAGG
AGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGAAGGAG
TACATTCGCGGTCTGCACGAAGGTTGGCTGGGTCCTCTTGATCCTCCCCC
TCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACACCCG
CCGCAGAGGCCGCCTCTGAGACCAAGGAGGGCGATGCCAATGCCCCCGAG
CAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACCAGC
TTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACTATCC
CCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCTGGGT
TTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCACAT
GGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCATACA
GCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATCTCC
GACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCCTCGAGGA
GGAAGAAAAGGAATGGCACAAGTCCGTCCACCGCAAGGACGAAGCAAACC
CTGACAAGGAACGCGAATGGCTCGACGACATCGTCATCGACCCGCGCCTC
GCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCGCGC
TCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGCCCTG
TTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGGAGAG
GATGAGGAGACGTTGAGGAGGAAGCCTATCTTGGGCAACCTTGATGAGGA
TTAAATGGCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCCCAGT
CCGCAGCGTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAGAATG
CTTGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGAT
CTTCTTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGA
GAGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATC
TCCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTT
CCTGTCCGCGCCACCGGGTGACGGTATCCGCGTGGCTCGCGACCACTTCA
AAGAATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATC
ATCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCAT
TCGCAAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACC
CCACGGTCGAAGACGTCGTTTTCGCCGCAAGGACGCAGATGGGCGTTATA
GAGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGTCACACATGGAA
GGAGTACATTCGCGGTCTGCACGAAGGTTGGCTGGGTCCTCTTGATCCTC
CCCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACA
CCCGCCGCAGAGGCCGCCTCTGAGACCAAGGAGGGCGATGCCAATGCCCC
CGAGCAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACAC
CAGCTTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACT
ATCCCCCAGACTCTTTCAGGCTCCGTCCCCATCGCCTTCCCCCACATCCT
GGGTTTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCC
ACATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCA
TACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCAT
CTCCGACGATACCCTTGGCAGCACCACCTATGAACAACAGACCGTCCTCG
AGGAGGAAGAAAAGGAATGGCACAAGTCCGTCCACCGCAAGGACGAAGCA
AACCCTGACAAGGAACGCGAATGGCTCGACGACATCGTCATCGACCCGCG
CCTCGCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCC
GCGCTCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGC
CCTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGG
AGAGGATGAGGAGACGTTGAGGAGGAAGCCTATCTTGGGCAACCTTGATG
AGGATTAAATGGCGGAGTCCTCCAATTCCGCCGCGGCCTCAGGCCCGGCC
CAGTCCGCAGCGTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAG
AATGCTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_17580-T1 | ATCC64974_17580-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263XVS |
| DBxref | InterPro:IPR021056 |
| DBxref | PFAM:PF11711 |
| Product | mitochondrial import inner membrane translocase subunit tim54 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1924090..1925546 - |
|
