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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1965359..1966304- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_17740-T1 ID=ATCC64974_17740-T1|Name=ATCC64974_17740-T1|organism=Aspergillus niger N402|type=mRNA|length=946bp|location=Sequence derived from alignment at OGUI01000003.1:1965359..1966304- (Aspergillus niger N402)
ATGGCGGAGTATTGGAAATCAGCGGTAGGCAGAAACGTTCTCTCTCATCT
CCCGTGTCTCAGCACTGACTCCGACACAGCCCAAGTTTTGGTGCAAGCAA
TGCAAGATCTTCATTCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGC
TACAGCCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATC
GGAACAATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTT
GAGCGACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGA
TGCTGCGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGC
GACCTGTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAG
ATGGGTATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGG
AGAATGGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAA
AAGCCAGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGAT
GAGGAGGAAGAAGAGGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGG
CTGGGGCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACC
TCGACGCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCCGCA
GCTCCTGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTC
CGTCAAGAGTCAGTTCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTC
CTGAGACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCC
TCCGAGGCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTAC
AGGGGTTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1965359..1966304- >ATCC64974_17740-T1 ID=ATCC64974_17740-T1|Name=ATCC64974_17740-T1|organism=Aspergillus niger N402|type=CDS|length=1782bp|location=Sequence derived from alignment at OGUI01000003.1:1965359..1966304- (Aspergillus niger N402)
CCCAAGTTTTGGTGCAAGCAATGCAAGATCTTCATTCGCGATACCGCCTT
CGAAAAGTCCCAACATGAGGCTACAGCCAAGCATCAGGGTAATCTAAAGC
GCTTCCTTCGTGACATCCATCGGAACAATGAGCAGCAACAGCGCGAAGCA
CAGAGAGCGAAAAATGAGGTTGAGCGACTTCGCCAGACCGTAGCCGGGTC
TGCGGGTGGAAAAGACGGGGATGCTGCGCCCTGGAAACGTGCGCCCGCCC
CGGCGCCCAAACCTCAGGAGCGACCTGTTTCTCTGGAAGAGAGAAAGCGA
CAAATGGCACAATTAGCGGAGATGGGTATCGCTATTCCGGAAGAATACCG
CAGTGAGATGGCCCTGGCCGGAGAATGGCAGACACTGTCGGAGAAAGTCG
TACAACCTTCGGAGGAATCAAAAGCCAGTCAATCACTAGGGGTACGCAAA
CGAAAGCATGAAGAGCGGGATGAGGAGGAAGAAGAGGCGAAACAGGAAGC
CGAACGTTTTGTTAGTAAGGGCTGGGGCTCCCGGACACGAGTGTATCCGG
GTGCCCAAGAGGACACTGACCTCGACGCTCTTTTGGAGTCGACGAAAGAT
ATTAAAAAGGGTAAATCCGCAGCTCCTGCGGAATCGGCGCCGGAGCCAGA
GCCTGAGAAGGCGTCGGATTCCGTCAAGAGTCAGTTCCTGCCGGTCAAGT
CGGAAGGGGATGCAGCAGCTCCTGAGACCGGTGAGCCGTCTCAAGTCAAA
CAGGAGAGCGAGACTGCCCCCTCCGAGGCGGCTCCTGTGACAAAGGAGGA
ACCGGAAGATGCCCCAGCTACAGGGGTTGTTTTCAAAAAGCGCAAGGCTA
AGGTTATGAGAAAGTAAATGGCGGAGTATTGGAAATCAGCGCCCAAGTTT
TGGTGCAAGCAATGCAAGATCTTCATTCGCGATACCGCCTTCGAAAAGTC
CCAACATGAGGCTACAGCCAAGCATCAGGGTAATCTAAAGCGCTTCCTTC
GTGACATCCATCGGAACAATGAGCAGCAACAGCGCGAAGCACAGAGAGCG
AAAAATGAGGTTGAGCGACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGG
AAAAGACGGGGATGCTGCGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCA
AACCTCAGGAGCGACCTGTTTCTCTGGAAGAGAGAAAGCGACAAATGGCA
CAATTAGCGGAGATGGGTATCGCTATTCCGGAAGAATACCGCAGTGAGAT
GGCCCTGGCCGGAGAATGGCAGACACTGTCGGAGAAAGTCGTACAACCTT
CGGAGGAATCAAAAGCCAGTCAATCACTAGGGGTACGCAAACGAAAGCAT
GAAGAGCGGGATGAGGAGGAAGAAGAGGCGAAACAGGAAGCCGAACGTTT
TGTTAGTAAGGGCTGGGGCTCCCGGACACGAGTGTATCCGGGTGCCCAAG
AGGACACTGACCTCGACGCTCTTTTGGAGTCGACGAAAGATATTAAAAAG
GGTAAATCCGCAGCTCCTGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAA
GGCGTCGGATTCCGTCAAGAGTCAGTTCCTGCCGGTCAAGTCGGAAGGGG
ATGCAGCAGCTCCTGAGACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGC
GAGACTGCCCCCTCCGAGGCGGCTCCTGTGACAAAGGAGGAACCGGAAGA
TGCCCCAGCTACAGGGGTTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGA
GAAAGTAAATGGCGGAGTATTGGAAATCAGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_17740-T1 | ATCC64974_17740-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000031.5 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013085 |
| DBxref | InterPro:IPR003604 |
| DBxref | PFAM:PF06220 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1965359..1966304 - |
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