You are here

Home

ATCC64974_18830-T1, ATCC64974_18830-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18830-T1
Unique NameATCC64974_18830-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2296668..2297574+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18830-T1 ID=ATCC64974_18830-T1|Name=ATCC64974_18830-T1|organism=Aspergillus niger N402|type=mRNA|length=907bp|location=Sequence derived from alignment at OGUI01000003.1:2296668..2297574+ (Aspergillus niger N402)
ATGCCTCTCACCCTCCCCTCCCTCCCCCGCCATGTCCCCTCCTTCCTCCC
TTACATCCTCCTCGCGCTCCTCCTCCTTACAACTCTCGCAGCCGCCAATG
TCGAAAAGACCATCTTCCTCGCCCCTCCCCCTACCACAATCCCAACCCCA
CATCCCCCAATCGACGACCTAGGTCTTGCGCGCCTCTCCCCCTCCCACCC
CATCCTCCGCACACACCTCAACGCATCCTTTCCAACCCAATCCTCACCAG
GGACCGAATCCTGGTTCTTTCTCCAAAACCTCACTCCTGGCCGACGCTAT
GAAGTACGCATCTGTTGGCTAGCAACTGTACGTGTTCCATGCCGTCTACC
CTCATTCTTATATACTGACTATACAATCAACAAAAAAGCAACCAACATCC
TTCACCCTAACAACATACACCCTCCCGCACGCCCTCTCAGATACCTTCCT
CCTCTCATCGATAACAAACTACTCCTCCTCGCGCCTCGCCAGCACTCCAG
ACTCCGAGTTTGACCTCAATCTCGACGACTCAACCACCACCAACTTCAAT
CCCGAAACTCCCCTCGACAGCAACGAACCCATTACAGACTCGGTCCTGTT
TCTACGTATCCGCGCCGCGGCAGACTATTACACCACGGATAAGGAGCTGA
TGACGCATGTGCCGCCCGTGGCGGTGGATGTGATTCTGGATCCGTTCCTG
GGGAATGTGTTTCCAAGGTCGTTGGTGCCGACGGCGTGTTACGGGGTGAT
CGTGGCTGGGGTGGCGTTTTTGGTGGGGAAATGGGTGGTTGGGGAGTTGG
GGAGAGTGGTGGATGATATGGCTGAGGAGAGGGAGAAGGAAGAGGGAGAT
GAGGATGTGGATGGGGCGATAGTAGATGGGATGAGAGAGGGGAAGAAGGT
GCGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:2296668..2297574+

>ATCC64974_18830-T1 ID=ATCC64974_18830-T1|Name=ATCC64974_18830-T1|organism=Aspergillus niger N402|type=CDS|length=1692bp|location=Sequence derived from alignment at OGUI01000003.1:2296668..2297574+ (Aspergillus niger N402)
ATGCCTCTCACCCTCCCCTCCCTCCCCCGCCATGTCCCCTCCTTCCTCCC
TTACATCCTCCTCGCGCTCCTCCTCCTTACAACTCTCGCAGCCGCCAATG
TCGAAAAGACCATCTTCCTCGCCCCTCCCCCTACCACAATCCCAACCCCA
CATCCCCCAATCGACGACCTAGGTCTTGCGCGCCTCTCCCCCTCCCACCC
CATCCTCCGCACACACCTCAACGCATCCTTTCCAACCCAATCCTCACCAG
GGACCGAATCCTGGTTCTTTCTCCAAAACCTCACTCCTGGCCGACGCTAT
GAAGTACGCATCTGTTGGCTAGCAACTCAACCAACATCCTTCACCCTAAC
AACATACACCCTCCCGCACGCCCTCTCAGATACCTTCCTCCTCTCATCGA
TAACAAACTACTCCTCCTCGCGCCTCGCCAGCACTCCAGACTCCGAGTTT
GACCTCAATCTCGACGACTCAACCACCACCAACTTCAATCCCGAAACTCC
CCTCGACAGCAACGAACCCATTACAGACTCGGTCCTGTTTCTACGTATCC
GCGCCGCGGCAGACTATTACACCACGGATAAGGAGCTGATGACGCATGTG
CCGCCCGTGGCGGTGGATGTGATTCTGGATCCGTTCCTGGGGAATGTGTT
TCCAAGGTCGTTGGTGCCGACGGCGTGTTACGGGGTGATCGTGGCTGGGG
TGGCGTTTTTGGTGGGGAAATGGGTGGTTGGGGAGTTGGGGAGAGTGGTG
GATGATATGGCTGAGGAGAGGGAGAAGGAAGAGGGAGATGAGGATGTGGA
TGGGGCGATAGTAGATGGGATGAGAGAGGGGAAGAAGGTGCGGTGAATGC
CTCTCACCCTCCCCTCCCTCCCCCGCCATGTCCCCTCCTTCCTCCCTTAC
ATCCTCCTCGCGCTCCTCCTCCTTACAACTCTCGCAGCCGCCAATGTCGA
AAAGACCATCTTCCTCGCCCCTCCCCCTACCACAATCCCAACCCCACATC
CCCCAATCGACGACCTAGGTCTTGCGCGCCTCTCCCCCTCCCACCCCATC
CTCCGCACACACCTCAACGCATCCTTTCCAACCCAATCCTCACCAGGGAC
CGAATCCTGGTTCTTTCTCCAAAACCTCACTCCTGGCCGACGCTATGAAG
TACGCATCTGTTGGCTAGCAACTCAACCAACATCCTTCACCCTAACAACA
TACACCCTCCCGCACGCCCTCTCAGATACCTTCCTCCTCTCATCGATAAC
AAACTACTCCTCCTCGCGCCTCGCCAGCACTCCAGACTCCGAGTTTGACC
TCAATCTCGACGACTCAACCACCACCAACTTCAATCCCGAAACTCCCCTC
GACAGCAACGAACCCATTACAGACTCGGTCCTGTTTCTACGTATCCGCGC
CGCGGCAGACTATTACACCACGGATAAGGAGCTGATGACGCATGTGCCGC
CCGTGGCGGTGGATGTGATTCTGGATCCGTTCCTGGGGAATGTGTTTCCA
AGGTCGTTGGTGCCGACGGCGTGTTACGGGGTGATCGTGGCTGGGGTGGC
GTTTTTGGTGGGGAAATGGGTGGTTGGGGAGTTGGGGAGAGTGGTGGATG
ATATGGCTGAGGAGAGGGAGAAGGAAGAGGGAGATGAGGATGTGGATGGG
GCGATAGTAGATGGGATGAGAGAGGGGAAGAAGGTGCGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_18830ATCC64974_18830Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18830-T1.exon1ATCC64974_18830-T1.exon1Aspergillus niger N402exon
ATCC64974_18830-T1.exon2ATCC64974_18830-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18830-T1.cdsATCC64974_18830-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18830-T1ATCC64974_18830-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-32)
DBxrefInterPro:IPR019433
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2296668..2297574 +
Powered by Drupal