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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:2314008..2315133- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_18900-T1 ID=ATCC64974_18900-T1|Name=ATCC64974_18900-T1|organism=Aspergillus niger N402|type=mRNA|length=1126bp|location=Sequence derived from alignment at OGUI01000003.1:2314008..2315133- (Aspergillus niger N402)
ATGAGGGCCAAGCGATCCAAGAAGTACCGCAAGCTCATGCACCAGTATGA
GCTTACGTTTGGGTTCCGTGAGCCGTATCAGGTTCTGGGTATGCAGACAT
CCATTCAACCAATCACTCATACTATCATGTCCAGGATAAGGGTATACTAA
CTAATATATGTGACAGTTGACTCTAATTTCCTCCGCGCCGTCCACTCCTT
CAAAATGGACTTGATCCCCGCTCTGGAGCGCACTCTTCAAGGCAAACCCA
AGCCTCGTATGTTGCCCCGGATATCAACTTTCGACTGCAATCAGTACAGT
ATACTAACAAATTGGATCAGTCCTCACAAAATGCTCCCTCGCCGCAATCA
TGGCCTCCCAACCCATCAACCCCAGGACCAACAACCCCTACCGACCCGAC
CACCTCCCCCCACCCACCACCCTTCCTCTCCGCCACTGCTCCCACAACGC
TGACTCGACCCCCATCGACGAAGTCGAGTGCCTCCTCTCTCTCCTCTCGC
CCTCCGCGGAGAGCAAAAAGAACAAGGAACATTACATCCTCGCGACGGCG
GACCCGCACAACGCCAAGGACAAGTCCGCGACGGATAACACAGCCGCCGG
TCGGAAACGGAAGCGCGACGCAGAGGACAAGGCTGAGGCGGCGTTACGGA
AGTCGAGGTTGCTACGGCGCCAGGCTCGGTCGATTCCAGGTGTGCCGATT
GTCTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCGATGAGTGATCCTTC
GGATGCGATCAGAGAGGGTGTGGAGAAGGGCAAGTTTAGGGTTGGGTTGA
ATGATGAAGCGAGAAAGCCGACGACGGCTGGGGACGGGGAGAAGACGAAG
AAGAAGAGGGATTTGAAGAAGCCCAAGGGACCGAATCCGCTGAGTGTGAA
GAAGCCGAAGAAGAGGGCGCCGGAAGATACTCCCGGGAAGGCGGAGAAGC
CGAAGAGAGAGGCTGAGGAGAGACCTGCTGCGGAGGAGCGGGATGGAGAG
GATGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGTCGTCATCATAATCG
CGGTGCTGGGAAGACGGATGGTGATGAGGGTGGTGCGCAGGAGGCTGCCG
CGCCGGCCGATGCCATGGATGATTGA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:2314008..2315133- >ATCC64974_18900-T1 ID=ATCC64974_18900-T1|Name=ATCC64974_18900-T1|organism=Aspergillus niger N402|type=CDS|length=2952bp|location=Sequence derived from alignment at OGUI01000003.1:2314008..2315133- (Aspergillus niger N402)
TCCTCACAAAATGCTCCCTCGCCGCAATCATGGCCTCCCAACCCATCAAC
CCCAGGACCAACAACCCCTACCGACCCGACCACCTCCCCCCACCCACCAC
CCTTCCTCTCCGCCACTGCTCCCACAACGCTGACTCGACCCCCATCGACG
AAGTCGAGTGCCTCCTCTCTCTCCTCTCGCCCTCCGCGGAGAGCAAAAAG
AACAAGGAACATTACATCCTCGCGACGGCGGACCCGCACAACGCCAAGGA
CAAGTCCGCGACGGATAACACAGCCGCCGGTCGGAAACGGAAGCGCGACG
CAGAGGACAAGGCTGAGGCGGCGTTACGGAAGTCGAGGTTGCTACGGCGC
CAGGCTCGGTCGATTCCAGGTGTGCCGATTGTCTATGTGAAGAGGTCGGT
GATGGTGTTGGAGCCGATGAGTGATCCTTCGGATGCGATCAGAGAGGGTG
TGGAGAAGGGCAAGTTTAGGGTTGGGTTGAATGATGAAGCGAGAAAGCCG
ACGACGGCTGGGGACGGGGAGAAGACGAAGAAGAAGAGGGATTTGAAGAA
GCCCAAGGGACCGAATCCGCTGAGTGTGAAGAAGCCGAAGAAGAGGGCGC
CGGAAGATACTCCCGGGAAGGCGGAGAAGCCGAAGAGAGAGGCTGAGGAG
AGACCTGCTGCGGAGGAGCGGGATGGAGAGGATGGAGATGCTGCGCCGAA
GGCGAAGCGCAGACGTCGTCATCATAATCGCGGTGCTGGGAAGACGGATG
GTGATGAGGGTGGTGCGCAGGAGGCTGCCGCGCCGGCCGATGCCATGGAT
GATTGATTGACTCTAATTTCCTCCGCGCCGTCCACTCCTTCAAAATGGAC
TTGATCCCCGCTCTGGAGCGCACTCTTCAAGGCAAACCCAAGCCTCATGA
GGGCCAAGCGATCCAAGAAGTACCGCAAGCTCATGCACCAGTATGAGCTT
ACGTTTGGGTTCCGTGAGCCGTATCAGGTTCTGGTCCTCACAAAATGCTC
CCTCGCCGCAATCATGGCCTCCCAACCCATCAACCCCAGGACCAACAACC
CCTACCGACCCGACCACCTCCCCCCACCCACCACCCTTCCTCTCCGCCAC
TGCTCCCACAACGCTGACTCGACCCCCATCGACGAAGTCGAGTGCCTCCT
CTCTCTCCTCTCGCCCTCCGCGGAGAGCAAAAAGAACAAGGAACATTACA
TCCTCGCGACGGCGGACCCGCACAACGCCAAGGACAAGTCCGCGACGGAT
AACACAGCCGCCGGTCGGAAACGGAAGCGCGACGCAGAGGACAAGGCTGA
GGCGGCGTTACGGAAGTCGAGGTTGCTACGGCGCCAGGCTCGGTCGATTC
CAGGTGTGCCGATTGTCTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCG
ATGAGTGATCCTTCGGATGCGATCAGAGAGGGTGTGGAGAAGGGCAAGTT
TAGGGTTGGGTTGAATGATGAAGCGAGAAAGCCGACGACGGCTGGGGACG
GGGAGAAGACGAAGAAGAAGAGGGATTTGAAGAAGCCCAAGGGACCGAAT
CCGCTGAGTGTGAAGAAGCCGAAGAAGAGGGCGCCGGAAGATACTCCCGG
GAAGGCGGAGAAGCCGAAGAGAGAGGCTGAGGAGAGACCTGCTGCGGAGG
AGCGGGATGGAGAGGATGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGT
CGTCATCATAATCGCGGTGCTGGGAAGACGGATGGTGATGAGGGTGGTGC
GCAGGAGGCTGCCGCGCCGGCCGATGCCATGGATGATTGATTGACTCTAA
TTTCCTCCGCGCCGTCCACTCCTTCAAAATGGACTTGATCCCCGCTCTGG
AGCGCACTCTTCAAGGCAAACCCAAGCCTCATGAGGGCCAAGCGATCCAA
GAAGTACCGCAAGCTCATGCACCAGTATGAGCTTACGTTTGGGTTCCGTG
AGCCGTATCAGGTTCTGGTCCTCACAAAATGCTCCCTCGCCGCAATCATG
GCCTCCCAACCCATCAACCCCAGGACCAACAACCCCTACCGACCCGACCA
CCTCCCCCCACCCACCACCCTTCCTCTCCGCCACTGCTCCCACAACGCTG
ACTCGACCCCCATCGACGAAGTCGAGTGCCTCCTCTCTCTCCTCTCGCCC
TCCGCGGAGAGCAAAAAGAACAAGGAACATTACATCCTCGCGACGGCGGA
CCCGCACAACGCCAAGGACAAGTCCGCGACGGATAACACAGCCGCCGGTC
GGAAACGGAAGCGCGACGCAGAGGACAAGGCTGAGGCGGCGTTACGGAAG
TCGAGGTTGCTACGGCGCCAGGCTCGGTCGATTCCAGGTGTGCCGATTGT
CTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCGATGAGTGATCCTTCGG
ATGCGATCAGAGAGGGTGTGGAGAAGGGCAAGTTTAGGGTTGGGTTGAAT
GATGAAGCGAGAAAGCCGACGACGGCTGGGGACGGGGAGAAGACGAAGAA
GAAGAGGGATTTGAAGAAGCCCAAGGGACCGAATCCGCTGAGTGTGAAGA
AGCCGAAGAAGAGGGCGCCGGAAGATACTCCCGGGAAGGCGGAGAAGCCG
AAGAGAGAGGCTGAGGAGAGACCTGCTGCGGAGGAGCGGGATGGAGAGGA
TGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGTCGTCATCATAATCGCG
GTGCTGGGAAGACGGATGGTGATGAGGGTGGTGCGCAGGAGGCTGCCGCG
CCGGCCGATGCCATGGATGATTGATTGACTCTAATTTCCTCCGCGCCGTC
CACTCCTTCAAAATGGACTTGATCCCCGCTCTGGAGCGCACTCTTCAAGG
CAAACCCAAGCCTCATGAGGGCCAAGCGATCCAAGAAGTACCGCAAGCTC
ATGCACCAGTATGAGCTTACGTTTGGGTTCCGTGAGCCGTATCAGGTTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0032040 | small-subunit processome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_18900-T1 | ATCC64974_18900-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006984 |
| DBxref | PFAM:PF04900 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:2314008..2315133 - |
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