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ATCC64974_19120-T1, ATCC64974_19120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19120-T1
Unique NameATCC64974_19120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2372120..2373236-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19120-T1 ID=ATCC64974_19120-T1|Name=ATCC64974_19120-T1|organism=Aspergillus niger N402|type=mRNA|length=1117bp|location=Sequence derived from alignment at OGUI01000003.1:2372120..2373236- (Aspergillus niger N402)
ATGGCGGACGCTCAATTCGATAGTGCGCTGTAAGTGCTATGGTTCTGTTT
TTGTTTCAAGACTATGAAGCCTGCATAGCCTCTGGGTGCAATCATTCCAC
GCGGTCAACCCCGCTTGTTGCCTCCCGCTGACTATCATACCTGCTTCCAG
GGACCTGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGG
CAATTACCTCCATCGTCCCTGACCTGACCGAAGACCTGCTCTCCTCTGTC
GACCAGCCTCTAGAAATCCGCAAATGCCCCAAGACAGACCGCGACTACCT
CCTCTGTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCA
ATGAATTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAGAGAGTG
AGAAAGCTTGAGGTCGCCGCTAACGAGGCTTTCGATGTCTACCGGGAGCT
GTACTACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATG
GATTCGCTGGCGTTATCCTGTTGAAGAAGGGTGAGCGAGTGATGTCTTGA
TACTTTCAGGCTGGAAATACGTGCTGATATCTCGCCATTATAGGAGTTAC
GCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGTATCCACGTCTTCGAGG
CTACCGACAGAGCGCGCATGTCCCACTACAAGCTGACTAGCACCGTCATC
CTGCACTTGGCTAATGAAACTGAGGCTTTGGGTGAGATGGACCTGAGTGG
TAACATGACCCGCCAGGTGGAGGTGGATCTTCCCGTCGAGTCGGATGCGA
GCCACGTCGCCAATGTTGGTCGACTTGTTGAGGACATGGAGTTGAAGATG
AGGAACTTGCTGCGTATGTCTTTTTTCTTAGCTATTGTGGCGCGAGAGTT
GTTACATTTCTGGGCTGCTTGCTAATTGAAATGTCCTTACAGAGGAGGTA
TACTTCGGCAAGGCTAAGGATGTCGTGGGTGAACTTCGGAGTAAGTGCAG
TCTAACCAGCTGGTGGGCAATGCCAGACTAACAAGCGAAACAGGTCTCCC
CTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGGAGATGATCC
GGTCTATGCACAGCTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:2372120..2373236-

>ATCC64974_19120-T1 ID=ATCC64974_19120-T1|Name=ATCC64974_19120-T1|organism=Aspergillus niger N402|type=CDS|length=4005bp|location=Sequence derived from alignment at OGUI01000003.1:2372120..2373236- (Aspergillus niger N402)
GTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGGAG
ATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCTAAG
GATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTCTGG
GGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGT
CCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAACT
GAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGGA
GGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTC
GACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACCTGC
TCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATTACC
TCCATCGTCCCTGACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAGCC
TCTAGAAATCCGCAAATGCCCCAAGACAGACCGCGACTACCTCCTCTGTG
ACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTC
GATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAGCT
TGAGGTCGCCGCTAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACG
AGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCT
GGCGTTATCCTGTTGAAGAAGGATGGCGGACGCTCAATTCGATAGTGCGC
TGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGGA
GATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCTAA
GGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTCTG
GGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATG
TCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAAC
TGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTGG
AGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGT
CGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACCTG
CTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATTAC
CTCCATCGTCCCTGACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAGC
CTCTAGAAATCCGCAAATGCCCCAAGACAGACCGCGACTACCTCCTCTGT
GACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATT
CGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAGC
TTGAGGTCGCCGCTAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTAC
GAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCGC
TGGCGTTATCCTGTTGAAGAAGGATGGCGGACGCTCAATTCGATAGTGCG
CTGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTGG
AGATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCTA
AGGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTCT
GGGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCAT
GTCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAAA
CTGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGTG
GAGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGG
TCGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACCT
GCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATTA
CCTCCATCGTCCCTGACCTGACCGAAGACCTGCTCTCCTCTGTCGACCAG
CCTCTAGAAATCCGCAAATGCCCCAAGACAGACCGCGACTACCTCCTCTG
TGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAAT
TCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAAG
CTTGAGGTCGCCGCTAACGAGGCTTTCGATGTCTACCGGGAGCTGTACTA
CGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTCG
CTGGCGTTATCCTGTTGAAGAAGGATGGCGGACGCTCAATTCGATAGTGC
GCTGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCTG
GAGATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGCT
AAGGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCTC
TGGGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGCA
TGTCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGAA
ACTGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGGT
GGAGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTG
GTCGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGACC
TGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAATT
ACCTCCATCGTCCCTGACCTGACCGAAGACCTGCTCTCCTCTGTCGACCA
GCCTCTAGAAATCCGCAAATGCCCCAAGACAGACCGCGACTACCTCCTCT
GTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGAA
TTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAAA
GCTTGAGGTCGCCGCTAACGAGGCTTTCGATGTCTACCGGGAGCTGTACT
ACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATTC
GCTGGCGTTATCCTGTTGAAGAAGGATGGCGGACGCTCAATTCGATAGTG
CGCTGTCTCCCCTCCTTGTCCGAGTCGAACAGAGATCGGGCTACCCACCT
GGAGATGATCCGGTCTATGCACAGCTAGAGGAGGTATACTTCGGCAAGGC
TAAGGATGTCGTGGGTGAACTTCGGAGAGTTACGCCAGGTGCTAAGAGCT
CTGGGGAGTGGGACAGTATCCACGTCTTCGAGGCTACCGACAGAGCGCGC
ATGTCCCACTACAAGCTGACTAGCACCGTCATCCTGCACTTGGCTAATGA
AACTGAGGCTTTGGGTGAGATGGACCTGAGTGGTAACATGACCCGCCAGG
TGGAGGTGGATCTTCCCGTCGAGTCGGATGCGAGCCACGTCGCCAATGTT
GGTCGACTTGTTGAGGACATGGAGTTGAAGATGAGGAACTTGCTGCGGAC
CTGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGGCAAT
TACCTCCATCGTCCCTGACCTGACCGAAGACCTGCTCTCCTCTGTCGACC
AGCCTCTAGAAATCCGCAAATGCCCCAAGACAGACCGCGACTACCTCCTC
TGTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCAATGA
ATTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAGAGAGTGAGAA
AGCTTGAGGTCGCCGCTAACGAGGCTTTCGATGTCTACCGGGAGCTGTAC
TACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATGGATT
CGCTGGCGTTATCCTGTTGAAGAAGGATGGCGGACGCTCAATTCGATAGT
GCGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0008290F-actin capping protein complex
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: Biological Process
TermDefinition
GO:0030036actin cytoskeleton organization
GO:0051016barbed-end actin filament capping
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAP2ATCC64974_19120Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19120-T1ATCC64974_19120-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19120-T1.cdsATCC64974_19120-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19120-T1.exon5ATCC64974_19120-T1.exon5Aspergillus niger N402exon
ATCC64974_19120-T1.exon4ATCC64974_19120-T1.exon4Aspergillus niger N402exon
ATCC64974_19120-T1.exon3ATCC64974_19120-T1.exon3Aspergillus niger N402exon
ATCC64974_19120-T1.exon2ATCC64974_19120-T1.exon2Aspergillus niger N402exon
ATCC64974_19120-T1.exon1ATCC64974_19120-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR037282
DBxrefInterPro:IPR019771
DBxrefInterPro:IPR042276
DBxrefInterPro:IPR001698
DBxrefPFAM:PF01115
ProductF-actin-capping protein subunit beta
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2372120..2373236 -
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