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ATCC64974_19740-T1, ATCC64974_19740-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19740-T1
Unique NameATCC64974_19740-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2607618..2609398+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19740-T1 ID=ATCC64974_19740-T1|Name=ATCC64974_19740-T1|organism=Aspergillus niger N402|type=mRNA|length=1781bp|location=Sequence derived from alignment at OGUI01000003.1:2607618..2609398+ (Aspergillus niger N402)
ATGGCTCAGAAGCGAAAAGCCTCGGGGGACCTCCCCAACCCGAAGCGGGT
ACAAAGCCGGACAACGCTGGACGATGTCGGTAAGATATGCCTAGAGACCG
AGTCTAGATTCCGGCTGATACTAAATGTCTTTCATATACTCCAGACCCAA
TATATGAAGAAAAGCACTCCGACCCCGAGTATGACTTTTCGGATGACTCC
AGTGTCGCTAGCGGTAGTCTTCATGAGACTCCAGCTACTCCGATGTCGAC
TATCTCCGCTAGATATCCTTCAGAGCTGAAAACTCACCGCTGCCCTTTCG
ACGGTTGCACGAAGGCCTTCAACCGTCCAGCACGCTTACAGGAACACTTG
CGCTCACACAACAATGAACGACTATTCCGTTGTACCCACGACGATTGCGA
TAAGACGTTTCTCCGAGCATCGCATCTGAGCCATCACATCAAGAGCGCCC
ATACCGGAATCAGAGATTACGTATGCGACCGTCCGGGATGTGGGAAGAGC
TTTGTAACTGGCTCACGGCTTCGTCGACATATAGCTGCTCATGATGGAAG
AGACAAGTACCGCTGCACAGAGTTTCCGCCTTGTGATGAGACCTTCCGAA
AACACTCAACGCTCCAAAAACACATCATGAGCGTGCATCTGAAACAGAAA
CCCTTCTCTTGCCCGCACATCGACGCAACTACCGGCCAGAAATGTCCAAT
GGCATTTGATACCGCAGGACACCTTCGAGCTCATGAGAGTCGCATCCACA
CCGAGAAACGATTCACCTGCACGGAGTGTACTCAGCAGGCCGAGCAGGCC
AACCCATCATCATCCGAGACTCCCGCTCTCACTACAGTAACATTCCCGAC
TTACGCCCTCCTCCAAGCTCACATCCGAACTGTCCACCCCCCACAATGTC
CCAATTGCAACCTGACCTGTTCCACGGCCCGAGAGCTCCGCCGTCATCTG
GAGGTCAGCCACGGTAACGTGAGTCTGGAAGAGCGAAAAGTCTTCCCCTG
CACCATACCAGGTTGCGATAGCAGCTTCACCAAAAAGGGAAACCTAACTG
TGCACATCCGCACCGTCCACCAAGGCGAGAAGCGCTTCGTCTGCGGCGAG
ACCGACCTTTCCATGTCCAAGCGAGTCGTCGGCTGGACGGGAGCCGACGG
CTGCGGAAAACGCTACGGGAGTAAACTCGCCCTGGAGGAGCACATTCGCA
CCGCGCACCTCGGCTTTCCCAACGCCAAGGCTGAGCGTCGACAGCGTCTT
GGTCTGAACAAGACACCGAACCCTCAGCAAACCGCTCCTTCCGCATTGGC
CGCTCTCACAGGTGAGGGTTATGCCGAAGAAACCGGCCGACAGATCACCT
GCTTCATCGAAGGCTGTCCGCACCGGTTCCACCGGAATTACGATCTGTGG
GTCCATATGGGGAGTAAGCACGGATGCACCGAGGACGAGATTCGCGATAT
GTTCATGCAGCGCGCGCTATTGGCGGACAGCAATGAGCCCGTTACCGGCG
ATATGTTTGGTATCTATGGACTCGAGTTCGATAACGATGACTCCTCCGCC
CCATATGAACCGTATATCATACATGCAGATTCAAAAGCTGGTCTATATAC
GATGGGCAGTGGTGGTGACCCCACAAATAATGAAAACAACCCCGGCGACT
TCCCCAGCAACTTTGCTGATGCCATGATTCAAGATGTCGATGTCGATGTT
TCTTCTTCTTCTAAGATACCCAGTGCTGATGATATGGCGATGATTGATCC
TTTGTTGGCGTATAATATGGCGGATTCATAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:2607618..2609398+

>ATCC64974_19740-T1 ID=ATCC64974_19740-T1|Name=ATCC64974_19740-T1|organism=Aspergillus niger N402|type=CDS|length=3432bp|location=Sequence derived from alignment at OGUI01000003.1:2607618..2609398+ (Aspergillus niger N402)
ATGGCTCAGAAGCGAAAAGCCTCGGGGGACCTCCCCAACCCGAAGCGGGT
ACAAAGCCGGACAACGCTGGACGATGTCGACCCAATATATGAAGAAAAGC
ACTCCGACCCCGAGTATGACTTTTCGGATGACTCCAGTGTCGCTAGCGGT
AGTCTTCATGAGACTCCAGCTACTCCGATGTCGACTATCTCCGCTAGATA
TCCTTCAGAGCTGAAAACTCACCGCTGCCCTTTCGACGGTTGCACGAAGG
CCTTCAACCGTCCAGCACGCTTACAGGAACACTTGCGCTCACACAACAAT
GAACGACTATTCCGTTGTACCCACGACGATTGCGATAAGACGTTTCTCCG
AGCATCGCATCTGAGCCATCACATCAAGAGCGCCCATACCGGAATCAGAG
ATTACGTATGCGACCGTCCGGGATGTGGGAAGAGCTTTGTAACTGGCTCA
CGGCTTCGTCGACATATAGCTGCTCATGATGGAAGAGACAAGTACCGCTG
CACAGAGTTTCCGCCTTGTGATGAGACCTTCCGAAAACACTCAACGCTCC
AAAAACACATCATGAGCGTGCATCTGAAACAGAAACCCTTCTCTTGCCCG
CACATCGACGCAACTACCGGCCAGAAATGTCCAATGGCATTTGATACCGC
AGGACACCTTCGAGCTCATGAGAGTCGCATCCACACCGAGAAACGATTCA
CCTGCACGGAGTGTACTCAGCAGGCCGAGCAGGCCAACCCATCATCATCC
GAGACTCCCGCTCTCACTACAGTAACATTCCCGACTTACGCCCTCCTCCA
AGCTCACATCCGAACTGTCCACCCCCCACAATGTCCCAATTGCAACCTGA
CCTGTTCCACGGCCCGAGAGCTCCGCCGTCATCTGGAGGTCAGCCACGGT
AACGTGAGTCTGGAAGAGCGAAAAGTCTTCCCCTGCACCATACCAGGTTG
CGATAGCAGCTTCACCAAAAAGGGAAACCTAACTGTGCACATCCGCACCG
TCCACCAAGGCGAGAAGCGCTTCGTCTGCGGCGAGACCGACCTTTCCATG
TCCAAGCGAGTCGTCGGCTGGACGGGAGCCGACGGCTGCGGAAAACGCTA
CGGGAGTAAACTCGCCCTGGAGGAGCACATTCGCACCGCGCACCTCGGCT
TTCCCAACGCCAAGGCTGAGCGTCGACAGCGTCTTGGTCTGAACAAGACA
CCGAACCCTCAGCAAACCGCTCCTTCCGCATTGGCCGCTCTCACAGGTGA
GGGTTATGCCGAAGAAACCGGCCGACAGATCACCTGCTTCATCGAAGGCT
GTCCGCACCGGTTCCACCGGAATTACGATCTGTGGGTCCATATGGGGAGT
AAGCACGGATGCACCGAGGACGAGATTCGCGATATGTTCATGCAGCGCGC
GCTATTGGCGGACAGCAATGAGCCCGTTACCGGCGATATGTTTGGTATCT
ATGGACTCGAGTTCGATAACGATGACTCCTCCGCCCCATATGAACCGTAT
ATCATACATGCAGATTCAAAAGCTGGTCTATATACGATGGGCAGTGGTGG
TGACCCCACAAATAATGAAAACAACCCCGGCGACTTCCCCAGCAACTTTG
CTGATGCCATGATTCAAGATGTCGATGTCGATGTTTCTTCTTCTTCTAAG
ATACCCAGTGCTGATGATATGGCGATGATTGATCCTTTGTTGGCGTATAA
TATGGCGGATTCATAGATGGCTCAGAAGCGAAAAGCCTCGGGGGACCTCC
CCAACCCGAAGCGGGTACAAAGCCGGACAACGCTGGACGATGTCGACCCA
ATATATGAAGAAAAGCACTCCGACCCCGAGTATGACTTTTCGGATGACTC
CAGTGTCGCTAGCGGTAGTCTTCATGAGACTCCAGCTACTCCGATGTCGA
CTATCTCCGCTAGATATCCTTCAGAGCTGAAAACTCACCGCTGCCCTTTC
GACGGTTGCACGAAGGCCTTCAACCGTCCAGCACGCTTACAGGAACACTT
GCGCTCACACAACAATGAACGACTATTCCGTTGTACCCACGACGATTGCG
ATAAGACGTTTCTCCGAGCATCGCATCTGAGCCATCACATCAAGAGCGCC
CATACCGGAATCAGAGATTACGTATGCGACCGTCCGGGATGTGGGAAGAG
CTTTGTAACTGGCTCACGGCTTCGTCGACATATAGCTGCTCATGATGGAA
GAGACAAGTACCGCTGCACAGAGTTTCCGCCTTGTGATGAGACCTTCCGA
AAACACTCAACGCTCCAAAAACACATCATGAGCGTGCATCTGAAACAGAA
ACCCTTCTCTTGCCCGCACATCGACGCAACTACCGGCCAGAAATGTCCAA
TGGCATTTGATACCGCAGGACACCTTCGAGCTCATGAGAGTCGCATCCAC
ACCGAGAAACGATTCACCTGCACGGAGTGTACTCAGCAGGCCGAGCAGGC
CAACCCATCATCATCCGAGACTCCCGCTCTCACTACAGTAACATTCCCGA
CTTACGCCCTCCTCCAAGCTCACATCCGAACTGTCCACCCCCCACAATGT
CCCAATTGCAACCTGACCTGTTCCACGGCCCGAGAGCTCCGCCGTCATCT
GGAGGTCAGCCACGGTAACGTGAGTCTGGAAGAGCGAAAAGTCTTCCCCT
GCACCATACCAGGTTGCGATAGCAGCTTCACCAAAAAGGGAAACCTAACT
GTGCACATCCGCACCGTCCACCAAGGCGAGAAGCGCTTCGTCTGCGGCGA
GACCGACCTTTCCATGTCCAAGCGAGTCGTCGGCTGGACGGGAGCCGACG
GCTGCGGAAAACGCTACGGGAGTAAACTCGCCCTGGAGGAGCACATTCGC
ACCGCGCACCTCGGCTTTCCCAACGCCAAGGCTGAGCGTCGACAGCGTCT
TGGTCTGAACAAGACACCGAACCCTCAGCAAACCGCTCCTTCCGCATTGG
CCGCTCTCACAGGTGAGGGTTATGCCGAAGAAACCGGCCGACAGATCACC
TGCTTCATCGAAGGCTGTCCGCACCGGTTCCACCGGAATTACGATCTGTG
GGTCCATATGGGGAGTAAGCACGGATGCACCGAGGACGAGATTCGCGATA
TGTTCATGCAGCGCGCGCTATTGGCGGACAGCAATGAGCCCGTTACCGGC
GATATGTTTGGTATCTATGGACTCGAGTTCGATAACGATGACTCCTCCGC
CCCATATGAACCGTATATCATACATGCAGATTCAAAAGCTGGTCTATATA
CGATGGGCAGTGGTGGTGACCCCACAAATAATGAAAACAACCCCGGCGAC
TTCCCCAGCAACTTTGCTGATGCCATGATTCAAGATGTCGATGTCGATGT
TTCTTCTTCTTCTAAGATACCCAGTGCTGATGATATGGCGATGATTGATC
CTTTGTTGGCGTATAATATGGCGGATTCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_19740ATCC64974_19740Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19740-T1.exon1ATCC64974_19740-T1.exon1Aspergillus niger N402exon
ATCC64974_19740-T1.exon2ATCC64974_19740-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19740-T1.cdsATCC64974_19740-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19740-T1ATCC64974_19740-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2607618..2609398 +
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