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ATCC64974_20200-T1, ATCC64974_20200-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_20200-T1
Unique NameATCC64974_20200-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2768305..2769874-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_20200-T1 ID=ATCC64974_20200-T1|Name=ATCC64974_20200-T1|organism=Aspergillus niger N402|type=mRNA|length=1570bp|location=Sequence derived from alignment at OGUI01000003.1:2768305..2769874- (Aspergillus niger N402)
ATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGG
TGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCG
ACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCC
GACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCA
AGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGG
GGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAG
GTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTC
GACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGA
GATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAA
GACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAA
GAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTT
TGTGTCTAAGTGACCGGTAAGCTATGTCCGGAAGCGTCGTGGATATACCA
TGCTAATGTTGTCTAGGGCACCGATCGAGGAATCGCGGAAATGGGGCATT
TACGACACTACGAACCTGTTGTTCAAGACATACTTCAAGCTTAACACCGT
TGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACC
TTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTAC
TATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAGTATGTGC
TTCAATCATCAATGTTAGTTGCCGGTGCTAATAGCTGGTTTCAATAGGCT
GAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAA
GAATAGAGAGTCAGTACTCCACATGCCGCCCCATGCTACATTGCTGACTA
CTTCAAGATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACA
CATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAA
GCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGT
TCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATA
TACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCG
CAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTC
CTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGG
ATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGA
ATGTCTGTTGTCGAACCTTATCTACAAGGTGCGTGTTGAGGTGCCCGAAC
TCTATCAAAGCATTTGACTGACCAAAATTGTAGGGGTTGATGAAAGGATA
CATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCAT
TCCCTGGAACGGGGGTTTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2768305..2769874-

>ATCC64974_20200-T1 ID=ATCC64974_20200-T1|Name=ATCC64974_20200-T1|organism=Aspergillus niger N402|type=CDS|length=6585bp|location=Sequence derived from alignment at OGUI01000003.1:2768305..2769874- (Aspergillus niger N402)
GGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAG
CAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAATTGATTCTCACC
TACCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAAA
GCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCG
ACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCC
GGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGG
ACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTG
GATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTT
CCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACGA
CCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTA
TCTACAAGGCTGAAGAGCATTTGTCGGCACCGATCGAGGAATCGCGGAAA
TGGGGCATTTACGACACTACGAACCTGTTGTTCAAGACATACTTCAAGCT
TAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGT
CTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACC
TTTGAGTACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGA
AATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTG
GTGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCC
GACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGC
CGACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGC
AAGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTG
GGGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAA
GGTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACT
CGACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGG
AGATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCA
AGACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCA
AGAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACT
TTGTGTCTAAGTGACCGGGGTTGATGAAAGGATACATTGCCCGTGAGCGC
GGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAACGGGGGT
TTAAATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACACAT
ACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCT
CTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCG
ATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATAC
TTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCAA
GGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTA
TCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATC
GGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGAATG
TCTGTTGTCGAACCTTATCTACAAGGCTGAAGAGCATTTGTCGGCACCGA
TCGAGGAATCGCGGAAATGGGGCATTTACGACACTACGAACCTGTTGTTC
AAGACATACTTCAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTGCG
GGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCA
AGTCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTCTG
GATGAGAATTATGCCGAAATGTCCAATATCTTTGATGATTTCAAGGAAGG
CCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGTCG
CGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTAAC
GCCGCACATGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAATGG
CTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTACCG
CTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAAGA
CATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAATCA
ATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCCAT
GCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAGAT
GCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAAGA
TGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGTGC
TCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGGGTTGATGAAAGGAT
ACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCA
TTCCCTGGAACGGGGGTTTAAATTGATTCTCACCTACCTCGTCCCCTGCC
ACCTCGTCACCACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTT
CCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGG
AGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTG
TTAAGAGACGCATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTA
CGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAA
GGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTG
CAGCGGCATTAAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAGAC
ATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATCTACAAGGCTGAAGA
GCATTTGTCGGCACCGATCGAGGAATCGCGGAAATGGGGCATTTACGACA
CTACGAACCTGTTGTTCAAGACATACTTCAAGCTTAACACCGTTGGCCTC
TCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGG
CTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTACTATGTCG
GTGTTATACACTTTCTGGATGAGAATTATGCCGAAATGTCCAATATCTTT
GATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGC
ATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGATTGAAGTCGT
TCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGACCTCCGATACTCG
CTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTG
GGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGAT
TTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGG
AAGGATACGGCAAATCAATTAATCAGGGGATACTCGACAGGCAGTTTGCA
AGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATATTTGCGGGCAT
TCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTC
GACGATCGCTTCCAAGATGATGCGACGGATGCCAAGAATCCAAAGTTGGA
GGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTGTGTCTAAGTGACC
GGGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGA
GCAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAATTGATTCTCAC
CTACCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAA
AGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGC
GACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGC
CGGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGG
GACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGT
GGATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGT
TCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACG
ACCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTT
ATCTACAAGGCTGAAGAGCATTTGTCGGCACCGATCGAGGAATCGCGGAA
ATGGGGCATTTACGACACTACGAACCTGTTGTTCAAGACATACTTCAAGC
TTAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCG
TCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCAC
CTTTGAGTACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCG
AAATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCT
GGTGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCC
CGACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCG
CCGACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAG
CAAGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGT
GGGGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGA
AGGTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATAC
TCGACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGG
GAGATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCC
AAGACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCC
AAGAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCAC
TTTGTGTCTAAGTGACCGGGGTTGATGAAAGGATACATTGCCCGTGAGCG
CGGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAACGGGGG
TTTAAATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACACA
TACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGC
TCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTC
GATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATA
CTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCA
AGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCT
ATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGAT
CGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGAAT
GTCTGTTGTCGAACCTTATCTACAAGGCTGAAGAGCATTTGTCGGCACCG
ATCGAGGAATCGCGGAAATGGGGCATTTACGACACTACGAACCTGTTGTT
CAAGACATACTTCAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTGC
GGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCCC
AAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTCT
GGATGAGAATTATGCCGAAATGTCCAATATCTTTGATGATTTCAAGGAAG
GCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGTC
GCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTAA
CGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAATG
GCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTACC
GCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAAG
ACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAATC
AATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCCA
TGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAGA
TGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAAG
ATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGTG
CTCAACAGAATGTTCACTTTGTGTCTAAGTGACCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSN12ATCC64974_20200Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20200-T1ATCC64974_20200-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20200-T1.cdsATCC64974_20200-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20200-T1.exon5ATCC64974_20200-T1.exon5Aspergillus niger N402exon
ATCC64974_20200-T1.exon4ATCC64974_20200-T1.exon4Aspergillus niger N402exon
ATCC64974_20200-T1.exon3ATCC64974_20200-T1.exon3Aspergillus niger N402exon
ATCC64974_20200-T1.exon2ATCC64974_20200-T1.exon2Aspergillus niger N402exon
ATCC64974_20200-T1.exon1ATCC64974_20200-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
ProductCOP9 signalosome (CSN) subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2768305..2769874 -
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