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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:2816624..2817738- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_20350-T1 ID=ATCC64974_20350-T1|Name=ATCC64974_20350-T1|organism=Aspergillus niger N402|type=mRNA|length=1115bp|location=Sequence derived from alignment at OGUI01000003.1:2816624..2817738- (Aspergillus niger N402)
ATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAACGCAGCAACTGAA
TGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGTTCGGATCAT
ACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTATCACCGCCTCAGAG
GCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACTCGCTCGTGCAGGC
TCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACGATATTCATTCAGA
CGGAAAACACACCGAACCCTGATGTAAGACTCCCCGTGGCACACCAGCAC
GAAGATCCCAACGAACGAACAAGCATCTGACCCTTGTATGCGGAACCCAA
CAGGCATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCC
GACCACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGC
ACCCCTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCT
GTATTTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAA
CTGGGCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGA
CATCGGGCGAGGCGATCGTGAACACCGTCGCCAAGACTGGTGAGAGTGGC
CAGGAAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGA
GGTGATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCA
TCCAGGAAGACGGTGGCGACATTGAGTTCCGTGGCTTTGAGAACGGCATT
GTCTTGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGT
GACGCTGCGTAACGGTATTGAGTCTATGCTTATGCATTATGTGAGTATCA
CACTACCTGCATGCATCTTGACAATAAAGTTTGACTAATTGTGTGTTTTT
AACCTACAGATCGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGA
AGAGGAGATTTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCC
AGCAAAAGGGCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGGAACATTG
GATTCGGCACCTTGA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:2816624..2817738- >ATCC64974_20350-T1 ID=ATCC64974_20350-T1|Name=ATCC64974_20350-T1|organism=Aspergillus niger N402|type=CDS|length=2898bp|location=Sequence derived from alignment at OGUI01000003.1:2816624..2817738- (Aspergillus niger N402)
ATCGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGAT
TTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGG
GCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCA
CCTTGAGCATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTT
CCCGACCACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTC
CGCACCCCTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACC
TCTGTATTTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTC
CAACTGGGCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCG
TGACATCGGGCGAGGCGATCGTGAACACCGTCGCCAAGACTGGTGAGAGT
GGCCAGGAAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGA
TGAGGTGATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCG
CCATCCAGGAAGACGGTGGCGACATTGAGTTCCGTGGCTTTGAGAACGGC
ATTGTCTTGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCAC
CGTGACGCTGCGTAACGGTATTGAGTCTATGCTTATGCATTATATGCTTA
GGCGCACTCTCTTCAGCGTCAGATTGACAACGCAGCAACTGAATGCTGCG
GAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGTTCGGATCATACAGGAA
TGTCCACCGTTCGGCACGTTTGCCTGCTATCACCGCCTCAGAGGCTCGTC
GCCGGCCGACCTTGAAGCCTCACCAGCACTCGCTCGTGCAGGCTCGCGTG
AACGGACCATCGCCGTCCAGCAAGCGCACGATATTCATTCAGACGGAAAA
CACACCGAACCCTGATATCGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAG
ACCAAGAAGAGGAGATTTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAG
CTGCGCCAGCAAAAGGGCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGG
AACATTGGATTCGGCACCTTGAGCATTGAAGTTCATCCCTAACCACCGTG
TCCTCCCCGAAAATTTCCCGACCACCTTCCTCGAATACCTGTCTCCCCGC
TCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGGCAGCAAGCCTGCTCAA
CGTCGACGGTGTTACCTCTGTATTTTACGGGCCTGACTTCATCACCGTAA
CTAAGGCGACCGACTCCAACTGGGCGCACATCAAGCCCGAAATCTTCAGT
CTCATCACTCAAGCCGTGACATCGGGCGAGGCGATCGTGAACACCGTCGC
CAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAGTCGGAGTCCCTGGCCT
ACGAGGAAGAAGAAGATGAGGTGATCGGCATGATCAAGGAGCTTTTGGAC
ACAAGGATTCGGCCCGCCATCCAGGAAGACGGTGGCGACATTGAGTTCCG
TGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTGCGCGGTGCTTGCCGGA
CCTGCGATTCGAGCACCGTGACGCTGCGTAACGGTATTGAGTCTATGCTT
ATGCATTATATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAACGCA
GCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGT
TCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTATCACC
GCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACTCGCT
CGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACGATAT
TCATTCAGACGGAAAACACACCGAACCCTGATATCGAAGAAGTCCAAGGA
GTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGTTCGC
CAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACTGCCT
CGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAGCATTGAAGTTC
ATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTCCTCGA
ATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGG
CAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACGGGCCT
GACTTCATCACCGTAACTAAGGCGACCGACTCCAACTGGGCGCACATCAA
GCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGAGGCGA
TCGTGAACACCGTCGCCAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAG
TCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGCATGAT
CAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGACGGTG
GCGACATTGAGTTCCGTGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTG
CGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGTAACGG
TATTGAGTCTATGCTTATGCATTATATGCTTAGGCGCACTCTCTTCAGCG
TCAGATTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATC
GCCAAACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACG
TTTGCCTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGC
CTCACCAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCC
AGCAAGCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016226 | iron-sulfur cluster assembly |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0051536 | iron-sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_20350-T1 | ATCC64974_20350-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036498 |
| DBxref | InterPro:IPR001075 |
| DBxref | InterPro:IPR034904 |
| DBxref | InterPro:IPR035433 |
| DBxref | InterPro:IPR014824 |
| DBxref | PFAM:PF01106 |
| DBxref | PFAM:PF08712 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:2816624..2817738 - |
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