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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3175894..3176724- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_21530-T1 ID=ATCC64974_21530-T1|Name=ATCC64974_21530-T1|organism=Aspergillus niger N402|type=mRNA|length=831bp|location=Sequence derived from alignment at OGUI01000003.1:3175894..3176724- (Aspergillus niger N402)
ATGGACAGCCTCAACTTCCCCACCCAAGACCGCGCCTTCTTGGAACCCCA
TCTCCCACCCAAAGATGGCAACCCATCATCATTATCATCATCTCTCCCCT
TCACCACCCTCACCTTCGCCACATCCCTCGACTCACAATTAGCTCTTTCC
CCGGGCACCCGGACCGTGCTGTCCGGCCCGCAATCCAAAGCCATGACGCA
CTATCTACGCTCACGCCATGACGCCATTCTCATCGGCGTAGGCACTGCCG
TGGCTGACAACCCGGGCCTGAACTGTCGATTGGCAGGGGTAGGCGGATAC
GGCTCCGAAGGTTTGGCGGGCCAGCCCCGACCAATTATCATCGACCCCTC
AGCCAGATGGGAGTTTACGGCGCAGTCGAAAATCTTCGAGCTGGCGAGGA
ATGGGCGGGGCAGGGCCCCGTTTATCATTACGGCTGCGGAGACGGTGCCT
TCTGCATCTCAGAGGGAGGTTTTGGAGAGTCATGGGGGGAAGTTTATTGC
GCTGCCAGTGGGGGTCGGTTCGGATGGTGCGCATCGGATCGATTGGACTG
CGTTGTTGGAGTGTCTTGTGCGTGAGGGGTTACGGAGCGTGATGATTGAG
GGGGGGGGGTCTATTATTAACTCTTTGCTTGAGCCGGGGTGTCAGACGTT
GGTGGATTCAGTGATTGTTACGATTGCTCCAACTTGGCTGGGGCAGGGAG
GTGTGGTGGTTTCGCCAAGGAGGAGGGTTGAGGGGGGTGTGGTTGTTCCG
GCTTCGAGATTGACCGGGGTCAAATGGTATCCGTTTGGGGAGGATGTGGT
GCTTTGTGGGAGGATTAAGGGGTCTGATTAG back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3175894..3176724- >ATCC64974_21530-T1 ID=ATCC64974_21530-T1|Name=ATCC64974_21530-T1|organism=Aspergillus niger N402|type=CDS|length=831bp|location=Sequence derived from alignment at OGUI01000003.1:3175894..3176724- (Aspergillus niger N402)
ATGGACAGCCTCAACTTCCCCACCCAAGACCGCGCCTTCTTGGAACCCCA
TCTCCCACCCAAAGATGGCAACCCATCATCATTATCATCATCTCTCCCCT
TCACCACCCTCACCTTCGCCACATCCCTCGACTCACAATTAGCTCTTTCC
CCGGGCACCCGGACCGTGCTGTCCGGCCCGCAATCCAAAGCCATGACGCA
CTATCTACGCTCACGCCATGACGCCATTCTCATCGGCGTAGGCACTGCCG
TGGCTGACAACCCGGGCCTGAACTGTCGATTGGCAGGGGTAGGCGGATAC
GGCTCCGAAGGTTTGGCGGGCCAGCCCCGACCAATTATCATCGACCCCTC
AGCCAGATGGGAGTTTACGGCGCAGTCGAAAATCTTCGAGCTGGCGAGGA
ATGGGCGGGGCAGGGCCCCGTTTATCATTACGGCTGCGGAGACGGTGCCT
TCTGCATCTCAGAGGGAGGTTTTGGAGAGTCATGGGGGGAAGTTTATTGC
GCTGCCAGTGGGGGTCGGTTCGGATGGTGCGCATCGGATCGATTGGACTG
CGTTGTTGGAGTGTCTTGTGCGTGAGGGGTTACGGAGCGTGATGATTGAG
GGGGGGGGGTCTATTATTAACTCTTTGCTTGAGCCGGGGTGTCAGACGTT
GGTGGATTCAGTGATTGTTACGATTGCTCCAACTTGGCTGGGGCAGGGAG
GTGTGGTGGTTTCGCCAAGGAGGAGGGTTGAGGGGGGTGTGGTTGTTCCG
GCTTCGAGATTGACCGGGGTCAAATGGTATCCGTTTGGGGAGGATGTGGT
GCTTTGTGGGAGGATTAAGGGGTCTGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009231 | riboflavin biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_21530-T1 | ATCC64974_21530-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000031.7 |
| Note | SMCOG1240:riboflavin biosynthesis protein RibD |
| DBxref | InterPro:IPR002734 |
| DBxref | InterPro:IPR024072 |
| DBxref | PFAM:PF01872 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3175894..3176724 - |
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