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ATCC64974_2160-T1, ATCC64974_2160-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_2160-T1
Unique NameATCC64974_2160-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:676283..677416-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_2160-T1 ID=ATCC64974_2160-T1|Name=ATCC64974_2160-T1|organism=Aspergillus niger N402|type=mRNA|length=1134bp|location=Sequence derived from alignment at OGUI01000001.1:676283..677416- (Aspergillus niger N402)
ATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGC
TCCCATGTATAGGTCGTCGAATAACCAGCTCCCTATGTTGCACCTCGCCG
ACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACC
TTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACCCC
CAAGCCAGCGCCCGGGTCTCCTCCAAACACCTCAAACCTGCTATACTCGT
CGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGA
GTGACTGGAGGTTTATTTAACCCCGCGGTATGCCCTGCCATTCCAATGTC
GGAATTTGCAATTGATCGTGATGCTAGGTCACTCTGGCCCTGTGTCTGGT
TGGCGGATTATCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCA
TCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGAC
TTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAGGGATT
GTTCATCGAAGTTTTCTTGACGGCTCAGTTAGTGTTTATTATCATCATGC
TGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGC
CTGGTATTCTTCGTGACTGAGATGGTTGGTAAGTAGATGTCTTCCACCCG
ACTGCTGCGAGATATTGTGCGACTAACCTCATCCTCTTCCAGGGGACTAC
TATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCTGACGTCAT
CAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGC
TGGGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAG
TACACCACCGTCAACCCCGGTCAGGACTACAATGAATGGGAAGCCAAGAT
GGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTCCCTCAT
ATAACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGC
AGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAACCCTAATAT
TCCTAATATCCCTCACGGGGCAGAGCAGGTGTAG
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Coding sequence (CDS) from alignment at OGUI01000001.1:676283..677416-

>ATCC64974_2160-T1 ID=ATCC64974_2160-T1|Name=ATCC64974_2160-T1|organism=Aspergillus niger N402|type=CDS|length=3060bp|location=Sequence derived from alignment at OGUI01000001.1:676283..677416- (Aspergillus niger N402)
GGGACTACTATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCT
GACGTCATCAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGG
TCCGTTGCTGGGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGA
TGTTCCAGTACACCACCGTCAACCCCGGTCAGGACTACAATGAATGGGAA
GCCAAGATGGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCG
TCCCTCATATAACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCAT
CAGCCGGCAGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAAC
CCTAATATTCCTAATATCCCTCACGGGGCAGAGCAGGTGTAGGTCACTCT
GGCCCTGTGTCTGGTTGGCGGATTATCTCCCATCCGTGGGGTTATTCTTT
TCGGAGTTCAGCTCATCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCT
TTGTTCCCAGGCGACTTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTC
AATATCACAGGGATTGTTCATCGAAGTTTTCTTGACGGCTCAGTTAGTGT
TTATTATCATCATGCTGGCTGTTGTGAAACATAAATCCACCTTCCTGGCG
CCTGTAGGCATTGGCCTGGTATTCTTCGTGACTGAGATGGTTGATGGGGC
CGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATG
TATAGGTCGTCGAATAACCAGCTCCCTATGTTGCACCTCGCCGACACGAC
GCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACCTTTCTGT
TCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACCCCCAAGCCA
GCGCCCGGGTCTCCTCCAAACACCTCAAACCTGCTATACTCGTCGCTATG
CTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGAGTGACTG
GAGGTTTATTTAACCCCGCGGGGACTACTATACTGGCGGCTCACTCAACC
CGGCGCGATCACTCGGTCCTGACGTCATCAACCGCAGTTTCCCCGGGTAC
CACTGGATCTACTGGGTCGGTCCGTTGCTGGGAAGTCTCCTCGCATGTGG
CTTCTTCACCTTCCTCAAGATGTTCCAGTACACCACCGTCAACCCCGGTC
AGGACTACAATGAATGGGAAGCCAAGATGGGCTCGGGAGGTCCCGGATCG
TGGGACATGTCGATGCACCGTCCCTCATATAACTCCGAAGCCACTACGGT
CGAGCAGCCGCAATCCCCATCAGCCGGCAGGAGGAACCACACCCCGACCA
ACTCTCAGCCGCAGAATAACCCTAATATTCCTAATATCCCTCACGGGGCA
GAGCAGGTGTAGGTCACTCTGGCCCTGTGTCTGGTTGGCGGATTATCTCC
CATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCATCGCAGGCATTGCCT
CTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGACTTGAATGTCGGCACT
CGCTTGGGCGGTGGTGCCTCAATATCACAGGGATTGTTCATCGAAGTTTT
CTTGACGGCTCAGTTAGTGTTTATTATCATCATGCTGGCTGTTGTGAAAC
ATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGCCTGGTATTCTTCGTG
ACTGAGATGGTTGATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCG
ACAGCCAGACGGCTCCCATGTATAGGTCGTCGAATAACCAGCTCCCTATG
TTGCACCTCGCCGACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGA
ATTTGTGGGAACCTTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGG
TGTCTAATACCCCCAAGCCAGCGCCCGGGTCTCCTCCAAACACCTCAAAC
CTGCTATACTCGTCGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTG
GGCATTCTATCGAGTGACTGGAGGTTTATTTAACCCCGCGGGGACTACTA
TACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCTGACGTCATCA
ACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGCTG
GGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAGTA
CACCACCGTCAACCCCGGTCAGGACTACAATGAATGGGAAGCCAAGATGG
GCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTCCCTCATAT
AACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGCAG
GAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAACCCTAATATTC
CTAATATCCCTCACGGGGCAGAGCAGGTGTAGGTCACTCTGGCCCTGTGT
CTGGTTGGCGGATTATCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCA
GCTCATCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAG
GCGACTTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAG
GGATTGTTCATCGAAGTTTTCTTGACGGCTCAGTTAGTGTTTATTATCAT
CATGCTGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCA
TTGGCCTGGTATTCTTCGTGACTGAGATGGTTGATGGGGCCGCAACAATG
GTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATGTATAGGTCGT
CGAATAACCAGCTCCCTATGTTGCACCTCGCCGACACGACGCGGAACAAT
TTCATCGCTGCCGTAGGGGAATTTGTGGGAACCTTTCTGTTCCTCTTCTT
CTCCTTCGCCGGGACGCAGGTGTCTAATACCCCCAAGCCAGCGCCCGGGT
CTCCTCCAAACACCTCAAACCTGCTATACTCGTCGCTATGCTTTGGGTTC
TCGTTGATGGTCAATGTGTGGGCATTCTATCGAGTGACTGGAGGTTTATT
TAACCCCGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_2160ATCC64974_2160Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2160-T1ATCC64974_2160-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2160-T1.cdsATCC64974_2160-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2160-T1.exon3ATCC64974_2160-T1.exon3Aspergillus niger N402exon
ATCC64974_2160-T1.exon2ATCC64974_2160-T1.exon2Aspergillus niger N402exon
ATCC64974_2160-T1.exon1ATCC64974_2160-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:676283..677416 -
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