You are here

Home

ATCC64974_22300-T1, ATCC64974_22300-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_22300-T1
Unique NameATCC64974_22300-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3410789..3411631+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_22300-T1 ID=ATCC64974_22300-T1|Name=ATCC64974_22300-T1|organism=Aspergillus niger N402|type=mRNA|length=843bp|location=Sequence derived from alignment at OGUI01000003.1:3410789..3411631+ (Aspergillus niger N402)
ATGGCCCCGAATGCCTTCGATGAAGCTGTGCAAGATGTGACCGGTGTCAT
TCACACAGCGACGCCATTCAAGCTCCACGTGGAAGACAACGAGCGCGACC
TACTCCAGCCCGCAATTGACGGCACAGTCAATATTCTCCAGTCAATCAAG
AAACTCTCTCCCGCGGTCCGCAGAGTGATCATCACTTCGTCGTTTACAGC
GATCCGGGATCCCCATCAAGGCACCCGGCCCGGTTATATATACACGGAGA
AGGATTGGAATCCAGTCACGTACGAAGAGGCCGCCGCGAAGGACACTCCC
GGGCTCATCGCATACGCAGCTGCCAAAACTCTAGCTGAGAGGGAGGCGTG
GAAATTTATGGCCGATAAGAACCCATCCTTTGACCTCGTCACGATCTGCC
CGACAATGGTGTATGGTCCGAACAGAAATGCAACTGCTGATCTGACAAGT
CTAAATACGTCTTCGCAGCACATTTAAAACCTAATCAATCCCAAGGGCAG
AGCAAGCGACCTGATGCCCGTGAACTCCTCCTGGTCCTGGGTGGACGCTC
GTGACGTCGCGCTAGCACATCTCCGAGCTTTCGAGGTCCCGGAGGCAGGG
GGTAATCGGTTCTTGGTTGGCAAAGGCAATTTTAGCTTCCAGCAGATGGC
AGATATCCTACGCGAAAATCTCGCCGAAGTGAGTGGTCGTGTTCCCGGGG
GAGACCCAGGATCGGGCTTTGGGACGACCGAGCTTTATATGCTCGATTCT
TCAAAGGCACAGAATCTTCTAGGTATCCTATTCCGAAAGTTGAATGAAAC
TATTGTAGATTCTGTTCGGTCACTTCTGCAGCTGGAACATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:3410789..3411631+

>ATCC64974_22300-T1 ID=ATCC64974_22300-T1|Name=ATCC64974_22300-T1|organism=Aspergillus niger N402|type=CDS|length=1506bp|location=Sequence derived from alignment at OGUI01000003.1:3410789..3411631+ (Aspergillus niger N402)
ATGGCCCCGAATGCCTTCGATGAAGCTGTGCAAGATGTGACCGGTGTCAT
TCACACAGCGACGCCATTCAAGCTCCACGTGGAAGACAACGAGCGCGACC
TACTCCAGCCCGCAATTGACGGCACAGTCAATATTCTCCAGTCAATCAAG
AAACTCTCTCCCGCGGTCCGCAGAGTGATCATCACTTCGTCGTTTACAGC
GATCCGGGATCCCCATCAAGGCACCCGGCCCGGTTATATATACACGGAGA
AGGATTGGAATCCAGTCACGTACGAAGAGGCCGCCGCGAAGGACACTCCC
GGGCTCATCGCATACGCAGCTGCCAAAACTCTAGCTGAGAGGGAGGCGTG
GAAATTTATGGCCGATAAGAACCCATCCTTTGACCTCGTCACGATCTGCC
CGACAATGGTAGCAAGCGACCTGATGCCCGTGAACTCCTCCTGGTCCTGG
GTGGACGCTCGTGACGTCGCGCTAGCACATCTCCGAGCTTTCGAGGTCCC
GGAGGCAGGGGGTAATCGGTTCTTGGTTGGCAAAGGCAATTTTAGCTTCC
AGCAGATGGCAGATATCCTACGCGAAAATCTCGCCGAAGTGAGTGGTCGT
GTTCCCGGGGGAGACCCAGGATCGGGCTTTGGGACGACCGAGCTTTATAT
GCTCGATTCTTCAAAGGCACAGAATCTTCTAGGTATCCTATTCCGAAAGT
TGAATGAAACTATTGTAGATTCTGTTCGGTCACTTCTGCAGCTGGAACAT
TGAATGGCCCCGAATGCCTTCGATGAAGCTGTGCAAGATGTGACCGGTGT
CATTCACACAGCGACGCCATTCAAGCTCCACGTGGAAGACAACGAGCGCG
ACCTACTCCAGCCCGCAATTGACGGCACAGTCAATATTCTCCAGTCAATC
AAGAAACTCTCTCCCGCGGTCCGCAGAGTGATCATCACTTCGTCGTTTAC
AGCGATCCGGGATCCCCATCAAGGCACCCGGCCCGGTTATATATACACGG
AGAAGGATTGGAATCCAGTCACGTACGAAGAGGCCGCCGCGAAGGACACT
CCCGGGCTCATCGCATACGCAGCTGCCAAAACTCTAGCTGAGAGGGAGGC
GTGGAAATTTATGGCCGATAAGAACCCATCCTTTGACCTCGTCACGATCT
GCCCGACAATGGTAGCAAGCGACCTGATGCCCGTGAACTCCTCCTGGTCC
TGGGTGGACGCTCGTGACGTCGCGCTAGCACATCTCCGAGCTTTCGAGGT
CCCGGAGGCAGGGGGTAATCGGTTCTTGGTTGGCAAAGGCAATTTTAGCT
TCCAGCAGATGGCAGATATCCTACGCGAAAATCTCGCCGAAGTGAGTGGT
CGTGTTCCCGGGGGAGACCCAGGATCGGGCTTTGGGACGACCGAGCTTTA
TATGCTCGATTCTTCAAAGGCACAGAATCTTCTAGGTATCCTATTCCGAA
AGTTGAATGAAACTATTGTAGATTCTGTTCGGTCACTTCTGCAGCTGGAA
CATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006694steroid biosynthetic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_22300ATCC64974_22300Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22300-T1.exon1ATCC64974_22300-T1.exon1Aspergillus niger N402exon
ATCC64974_22300-T1.exon2ATCC64974_22300-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22300-T1.cdsATCC64974_22300-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22300-T1ATCC64974_22300-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002225
DBxrefPFAM:PF07993
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3410789..3411631 +
Powered by Drupal