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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3723771..3725135+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_23390-T1 ID=ATCC64974_23390-T1|Name=ATCC64974_23390-T1|organism=Aspergillus niger N402|type=mRNA|length=1365bp|location=Sequence derived from alignment at OGUI01000003.1:3723771..3725135+ (Aspergillus niger N402)
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCGTATGGCA
CCCTGTCCCCCGTGTGAATTGGCTGCAGTCCATGGATCGCATATCTGAAT
TCGCTCTCCTATAGTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGG
TCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTC
TCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTGTGAGTTCCCCG
ATTTGTGACCTTTGTATACCCCTTTGGATGTTTAAGGTTCATCAGATGCA
AAGTGCACAGTATACTAAGACTTGCTGTCGATATTTAGTGCGAGTTCATG
ACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGC
CAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCTTCC
GTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGAC
TACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTG
GAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTA
ACCCCGTCGTTGTTCTTGAGAACGAGTACGTGGCCCCCGTGGAAGTATCG
GAGTATTTGTGGAATGTTTTTGAACCTGACAATAATTGCATAGGCTGCTG
TACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGT
TCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCA
TTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAG
CTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGT
CAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAGACTGGTC
GCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAG
ATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTGCTCCTGC
CGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCG
AGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAG
CTGTTGCGCCTGTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3723771..3725135+ >ATCC64974_23390-T1 ID=ATCC64974_23390-T1|Name=ATCC64974_23390-T1|organism=Aspergillus niger N402|type=CDS|length=4500bp|location=Sequence derived from alignment at OGUI01000003.1:3723771..3725135+ (Aspergillus niger N402)
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCTTACAAGG
TAACGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACC
CCCATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGC
TGGACTGCACCCCATTTGCGAGTTCATGACCTTCAACTTCGCCATGCAGG
CTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATGTCTGGT
GGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGC
TGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACGGCAGTA
TCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCCAAGGGT
CTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAA
CGAGCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGG
ATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAG
GACTTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGC
TGCTGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACC
TTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAG
AAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGT
CTCCTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGA
CTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCC
GTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCA
GGCTGCCAAGCTGTTGCGCCTGTAAATGGCTGCTCCCCGACTTTTCCGCC
CAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGA
ATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGAGGCGCTCG
CCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCTTACAAGGTAACGAGGGGTCTGTTGGACCGCTT
CGGTCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTG
GTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTTGCGAGTTC
ATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGC
TGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCT
TCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAG
GACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCC
CTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATC
CTAACCCCGTCGTTGTTCTTGAGAACGAGCTGCTGTACGGTCAGGCTTTC
CCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAA
GGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCC
GCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTAC
GGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGT
TGAGACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCG
AGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCC
ATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGG
CGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCC
CCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAA
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCTTACAAGG
TAACGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACC
CCCATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGC
TGGACTGCACCCCATTTGCGAGTTCATGACCTTCAACTTCGCCATGCAGG
CTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATGTCTGGT
GGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGC
TGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACGGCAGTA
TCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCCAAGGGT
CTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAA
CGAGCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGG
ATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAG
GACTTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGC
TGCTGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACC
TTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAG
AAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGT
CTCCTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGA
CTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCC
GTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCA
GGCTGCCAAGCTGTTGCGCCTGTAAATGGCTGCTCCCCGACTTTTCCGCC
CAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGA
ATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGAGGCGCTCG
CCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCTTACAAGGTAACGAGGGGTCTGTTGGACCGCTT
CGGTCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTG
GTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTTGCGAGTTC
ATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGC
TGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCT
TCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAG
GACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCC
CTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATC
CTAACCCCGTCGTTGTTCTTGAGAACGAGCTGCTGTACGGTCAGGCTTTC
CCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAA
GGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCC
GCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTAC
GGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGT
TGAGACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCG
AGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCC
ATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGG
CGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCC
CCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_23390-T1 | ATCC64974_23390-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR033248 |
| DBxref | InterPro:IPR009014 |
| DBxref | InterPro:IPR005475 |
| DBxref | PFAM:PF02779 |
| DBxref | PFAM:PF02780 |
| Product | beta subunit |
| Product | pyruvate dehydrogenase E1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3723771..3725135 + |
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