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ATCC64974_23720-T1, ATCC64974_23720-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_23720-T1
Unique NameATCC64974_23720-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3943948..3945126+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_23720-T1 ID=ATCC64974_23720-T1|Name=ATCC64974_23720-T1|organism=Aspergillus niger N402|type=mRNA|length=1179bp|location=Sequence derived from alignment at OGUI01000003.1:3943948..3945126+ (Aspergillus niger N402)
ATGAACGCACCAGACCGGTAGGTGGAACGTTCTTCTTACATCTACGCAGT
CTATCTTGTAGCATGCTTTATTCCCACTTGGTTTCCGCGCCCCTTCCTCT
CCTCCCCCACCATTTGGCTTGTTCTAGGTTCGGGAGCTGTTCGCTGGTGG
GAATGGTGTGACTGATGTCTCAATGCGGACGGTGCCATTAACCGGGCACA
TGCTCTTGCCTTCCCCCCTCCATTCACTGCCCCAGAGTGCCGAACTATGT
TATGGACTCCACTCCTGTCCCTCTTCCTCTCCCTCAGTTCATTTCAATGT
TTATGCCCCTTGTCCAGATCTCTCATTGAATGGATTGACCTCGTACTTTG
CGTTGTCTTCACCCCCTAGCATTCCTGTCATATTGTGAATCTTTCTCGAA
CACAACGATTTTAAGAATGGAATCCATCATGCCTGCAGAAATGGTGTATG
CGCGCCTGAAGAATGGCAGTGGTGGATCTCGCGTTCGCTGCCAGTCTACC
GTCAACGTTTCTCATGACCAGCAGCCGAGGTCCGCTTCGGGTTTTCTTTG
AAGATTCTACTTGCCTTCATTTGTGAAGCTTCTAATACATTCGGTCCACT
GACTCGGTATGAAACCTAGATACGAATCGTTCGTTCTTGCGAATGGCGAG
AATAAAGTCGAGATGGAGATCGATACTCGTATGTCATCCAAACCTCGCAC
CTAAACGGTCTGCGTTCATTTCTAACATGGGCTTCTTGTTCTAGGAATCC
CATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCACACGTTGGGAAAT
TTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCTCTTCGCTGCGTA
CAAGGTATGTCTGCGATCGTGATTTATCCTCGTGTCTATTTCCGGGCATT
CTTCATGCTCCCAGTTGCTGCTTTTATCAGATCTGTGGGGTTAGTTTGCG
TAAGGGTCTGACGTGACTGTCATAGGTTCCCCATCCGCTTGTTCCCAATT
TCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGTA
ATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGGA
GTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAGC
AGCAGAATGGCGTCCAGGATGGTGTTTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:3943948..3945126+

>ATCC64974_23720-T1 ID=ATCC64974_23720-T1|Name=ATCC64974_23720-T1|organism=Aspergillus niger N402|type=CDS|length=1560bp|location=Sequence derived from alignment at OGUI01000003.1:3943948..3945126+ (Aspergillus niger N402)
ATGAACGCACCAGACCGATACGAATCGTTCGTTCTTGCGAATGGCGAGAA
TAAAGTCGAGATGGAGATCGATACTCGAATCCCATCTTCTGCCATCTTCA
CCTTCAATAAGGAAGATCACACGTTGGGAAATTTGATCCGCTCTCGCCTC
TTGCAAAGCTCTCATGTTCTCTTCGCTGCGTACAAGGTTCCCCATCCGCT
TGTTCCCAATTTCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAA
AGGATGCGGTAATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATC
CTCTCTCGGGAGTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGC
TACCGCCCAGCAGCAGAATGGCGTCCAGGATGGTGTTTAGATGAACGCAC
CAGACCGATACGAATCGTTCGTTCTTGCGAATGGCGAGAATAAAGTCGAG
ATGGAGATCGATACTCGAATCCCATCTTCTGCCATCTTCACCTTCAATAA
GGAAGATCACACGTTGGGAAATTTGATCCGCTCTCGCCTCTTGCAAAGCT
CTCATGTTCTCTTCGCTGCGTACAAGGTTCCCCATCCGCTTGTTCCCAAT
TTCCAGCTTCGAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGT
AATTGCAGCCTGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGG
AGTTTACTAAGGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAG
CAGCAGAATGGCGTCCAGGATGGTGTTTAGATGAACGCACCAGACCGATA
CGAATCGTTCGTTCTTGCGAATGGCGAGAATAAAGTCGAGATGGAGATCG
ATACTCGAATCCCATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCAC
ACGTTGGGAAATTTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCT
CTTCGCTGCGTACAAGGTTCCCCATCCGCTTGTTCCCAATTTCCAGCTTC
GAGTTCAGACCGATGGCGATATCACCCCAAAGGATGCGGTAATTGCAGCC
TGCCATGAGCTTGTTCGGGACCTGGGTATCCTCTCTCGGGAGTTTACTAA
GGAATATGAGCTCCGTAAGATGGTGGGGGCTACCGCCCAGCAGCAGAATG
GCGTCCAGGATGGTGTTTAGATGAACGCACCAGACCGATACGAATCGTTC
GTTCTTGCGAATGGCGAGAATAAAGTCGAGATGGAGATCGATACTCGAAT
CCCATCTTCTGCCATCTTCACCTTCAATAAGGAAGATCACACGTTGGGAA
ATTTGATCCGCTCTCGCCTCTTGCAAAGCTCTCATGTTCTCTTCGCTGCG
TACAAGGTTCCCCATCCGCTTGTTCCCAATTTCCAGCTTCGAGTTCAGAC
CGATGGCGATATCACCCCAAAGGATGCGGTAATTGCAGCCTGCCATGAGC
TTGTTCGGGACCTGGGTATCCTCTCTCGGGAGTTTACTAAGGAATATGAG
CTCCGTAAGATGGTGGGGGCTACCGCCCAGCAGCAGAATGGCGTCCAGGA
TGGTGTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005665RNA polymerase II, core complex
Vocabulary: Biological Process
TermDefinition
GO:0006366transcription by RNA polymerase II
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0001055RNA polymerase II activity
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_23720ATCC64974_23720Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23720-T1.exon1ATCC64974_23720-T1.exon1Aspergillus niger N402exon
ATCC64974_23720-T1.exon2ATCC64974_23720-T1.exon2Aspergillus niger N402exon
ATCC64974_23720-T1.exon3ATCC64974_23720-T1.exon3Aspergillus niger N402exon
ATCC64974_23720-T1.exon4ATCC64974_23720-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23720-T1.cdsATCC64974_23720-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23720-T1ATCC64974_23720-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926591L
DBxrefInterPro:IPR037685
DBxrefInterPro:IPR008193
DBxrefInterPro:IPR036603
DBxrefInterPro:IPR009025
DBxrefPFAM:PF13656
DBxrefPFAM:PF01193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3943948..3945126 +
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