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ATCC64974_23840-T1, ATCC64974_23840-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_23840-T1
Unique NameATCC64974_23840-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3981945..3983462+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_23840-T1 ID=ATCC64974_23840-T1|Name=ATCC64974_23840-T1|organism=Aspergillus niger N402|type=mRNA|length=1518bp|location=Sequence derived from alignment at OGUI01000003.1:3981945..3983462+ (Aspergillus niger N402)
ATGCCCGCCCCCTCCACCACCCTCCTCATCGAGGGTTCTTTCACCGAGCT
CGCCGACGAGTTCGCCCAGTACATCGACGCCCTGCGCAAGTCCGAGGCCT
CCAACAGCCTTCAGTCCGAGATTTCCCCGCTTCTGCAGCCCCTTCGTGAG
CAGGAACAGTCCGATGCAGAGCCCGACCGCAAGCAGCGCGATGAGGTCCT
CAAGAAGCTGGTCTCCGCGGCCGTTGTCCTGAACGGCGCCCCCGAGAAGG
GTACGTATTATCGATAGACACCCCCTCCATACCATGAGACGTTGATCCTA
CAGAGACTGACGGACGGACGAATGAATTATACAGAGATCATCTCCGCCTA
CAACCTTCTCGTCCACCTTGTCCACCAGGCCTCCGACCCGGATATGTTCC
TGTCGCGCATCTGCACCTACCTCGCCAAACCCATCTCCTCCTCCCCTCAG
TTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCACCATCTTCAACACGCT
TGCTCCCTCCGACTCCAGCCGCTACCACGTTCTCCTGGCTACCGTCGCCG
TCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGACGCCCTCAAGTCGCAG
CTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCTGGGAGCTGGACGCCGA
CGAGGCCCAGCGCCTGCACCTCGCCATTGCCGATGCCGCCCAGGCGTCCG
GTGACCCCGAGTTGGCTCAAACCCACGTCGTCCAGGCCCTGCAGACCATC
CCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCGATCTGGCCGTCCGCGC
CCTGACCTCCGCTCTCACCCACCCGGCTGTCTTCGACTTCACCCCGCTGA
CTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAGCGACAGCACCCTCTTT
GAGCTGCTCGAGATCTTCACCGCCGATACCCTCGACGCCTACGAGGCCTT
TGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGCGGCGTGCTGGCTGAGG
CCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCTCACTCTGGCCTCCCTG
GCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACGCCACCATTGCCACGGC
CCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGGGTTATTGACACCATCC
GCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCTGCGCTCCGAGTTCCTG
GTCCACCGGGCCACCTACCGTGTCTTTGGTGAGAAGCAGTGGGCCGAGGT
GCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTGGAGAACGTGCTGGGTG
TTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGAGGGGCTGCAGGCGGCC
CAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTAACGACAAGAAGGGTGG
TGACCGTCGCCGTCACAACAACAACAACCAGAACCAGAACCAGCAGCAGC
AGCAGCAACAGCAGCAGCAAGCACCTTCGGCGCCCGCCGCTGCCCCGGAG
GCTGTTGCCGTGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:3981945..3983462+

>ATCC64974_23840-T1 ID=ATCC64974_23840-T1|Name=ATCC64974_23840-T1|organism=Aspergillus niger N402|type=CDS|length=2868bp|location=Sequence derived from alignment at OGUI01000003.1:3981945..3983462+ (Aspergillus niger N402)
ATGCCCGCCCCCTCCACCACCCTCCTCATCGAGGGTTCTTTCACCGAGCT
CGCCGACGAGTTCGCCCAGTACATCGACGCCCTGCGCAAGTCCGAGGCCT
CCAACAGCCTTCAGTCCGAGATTTCCCCGCTTCTGCAGCCCCTTCGTGAG
CAGGAACAGTCCGATGCAGAGCCCGACCGCAAGCAGCGCGATGAGGTCCT
CAAGAAGCTGGTCTCCGCGGCCGTTGTCCTGAACGGCGCCCCCGAGAAGG
AGATCATCTCCGCCTACAACCTTCTCGTCCACCTTGTCCACCAGGCCTCC
GACCCGGATATGTTCCTGTCGCGCATCTGCACCTACCTCGCCAAACCCAT
CTCCTCCTCCCCTCAGTTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCA
CCATCTTCAACACGCTTGCTCCCTCCGACTCCAGCCGCTACCACGTTCTC
CTGGCTACCGTCGCCGTCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGA
CGCCCTCAAGTCGCAGCTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCT
GGGAGCTGGACGCCGACGAGGCCCAGCGCCTGCACCTCGCCATTGCCGAT
GCCGCCCAGGCGTCCGGTGACCCCGAGTTGGCTCAAACCCACGTCGTCCA
GGCCCTGCAGACCATCCCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCG
ATCTGGCCGTCCGCGCCCTGACCTCCGCTCTCACCCACCCGGCTGTCTTC
GACTTCACCCCGCTGACTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAG
CGACAGCACCCTCTTTGAGCTGCTCGAGATCTTCACCGCCGATACCCTCG
ACGCCTACGAGGCCTTTGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGC
GGCGTGCTGGCTGAGGCCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCT
CACTCTGGCCTCCCTGGCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACG
CCACCATTGCCACGGCCCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGG
GTTATTGACACCATCCGCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCT
GCGCTCCGAGTTCCTGGTCCACCGGGCCACCTACCGTGTCTTTGGTGAGA
AGCAGTGGGCCGAGGTGCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTG
GAGAACGTGCTGGGTGTTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGA
GGGGCTGCAGGCGGCCCAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTA
ACGACAAGAAGGGTGGTGACCGTCGCCGTCACAACAACAACAACCAGAAC
CAGAACCAGCAGCAGCAGCAGCAACAGCAGCAGCAAGCACCTTCGGCGCC
CGCCGCTGCCCCGGAGGCTGTTGCCGTGGAGTAAATGCCCGCCCCCTCCA
CCACCCTCCTCATCGAGGGTTCTTTCACCGAGCTCGCCGACGAGTTCGCC
CAGTACATCGACGCCCTGCGCAAGTCCGAGGCCTCCAACAGCCTTCAGTC
CGAGATTTCCCCGCTTCTGCAGCCCCTTCGTGAGCAGGAACAGTCCGATG
CAGAGCCCGACCGCAAGCAGCGCGATGAGGTCCTCAAGAAGCTGGTCTCC
GCGGCCGTTGTCCTGAACGGCGCCCCCGAGAAGGAGATCATCTCCGCCTA
CAACCTTCTCGTCCACCTTGTCCACCAGGCCTCCGACCCGGATATGTTCC
TGTCGCGCATCTGCACCTACCTCGCCAAACCCATCTCCTCCTCCCCTCAG
TTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCACCATCTTCAACACGCT
TGCTCCCTCCGACTCCAGCCGCTACCACGTTCTCCTGGCTACCGTCGCCG
TCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGACGCCCTCAAGTCGCAG
CTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCTGGGAGCTGGACGCCGA
CGAGGCCCAGCGCCTGCACCTCGCCATTGCCGATGCCGCCCAGGCGTCCG
GTGACCCCGAGTTGGCTCAAACCCACGTCGTCCAGGCCCTGCAGACCATC
CCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCGATCTGGCCGTCCGCGC
CCTGACCTCCGCTCTCACCCACCCGGCTGTCTTCGACTTCACCCCGCTGA
CTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAGCGACAGCACCCTCTTT
GAGCTGCTCGAGATCTTCACCGCCGATACCCTCGACGCCTACGAGGCCTT
TGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGCGGCGTGCTGGCTGAGG
CCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCTCACTCTGGCCTCCCTG
GCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACGCCACCATTGCCACGGC
CCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGGGTTATTGACACCATCC
GCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCTGCGCTCCGAGTTCCTG
GTCCACCGGGCCACCTACCGTGTCTTTGGTGAGAAGCAGTGGGCCGAGGT
GCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTGGAGAACGTGCTGGGTG
TTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGAGGGGCTGCAGGCGGCC
CAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTAACGACAAGAAGGGTGG
TGACCGTCGCCGTCACAACAACAACAACCAGAACCAGAACCAGCAGCAGC
AGCAGCAACAGCAGCAGCAAGCACCTTCGGCGCCCGCCGCTGCCCCGGAG
GCTGTTGCCGTGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_23840ATCC64974_23840Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23840-T1.exon1ATCC64974_23840-T1.exon1Aspergillus niger N402exon
ATCC64974_23840-T1.exon2ATCC64974_23840-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23840-T1.cdsATCC64974_23840-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23840-T1ATCC64974_23840-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027528
DBxrefInterPro:IPR040750
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
DBxrefPFAM:PF18005
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3981945..3983462 +
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