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ATCC64974_24160-T1, ATCC64974_24160-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_24160-T1
Unique NameATCC64974_24160-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4060237..4061225-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_24160-T1 ID=ATCC64974_24160-T1|Name=ATCC64974_24160-T1|organism=Aspergillus niger N402|type=mRNA|length=989bp|location=Sequence derived from alignment at OGUI01000003.1:4060237..4061225- (Aspergillus niger N402)
ATGATTGAGCATATAATCGACAGTAAAGATGTCGGAGAAATCCAGACCCC
AGAAACTCCAGTATTACTAGCCAAATCACACACCCTGGCTTCAAGCAACA
ATGACATAGACGAGCTTGCCCCGGAAAGCCACCCTCCAACAGAAGAGACA
AAACCAGTCCTCTCACCAGCCGAGGACTCCCCAACACCCAAGTTCTGGAG
CCACACCATGCTCAAAAGCCCTGAAGGCAAAAACATTATCGTGCATTACT
GCAAGACACTCAAAAGCAGCGAAGAAGTTGCGCAACTCTTCCTAAATGAC
AAAATTCTCGGCTTCGACATGGAATGGAAAGCCCAGGCCTCCGCCTGGAA
CAGCATCCAAGACAACGTATCTCTAATCCAAATCGCAAACAGAGAGCGAA
TCGCTCTCTTCCACGTTGCCCTTTTCAGACCAGGCAGAAAGATCAGCGAC
CTCGTCCCTCCATCGTTGAAACAAATCATCGAATCCCCAGACATCACAAA
GCTCGGTGTATCAATCAAAGCAGACTGCACGCGTCTCCGCAAGTACCTCA
AGGTCGATGCGCACGGGATCTTCGAGCTCAGCCACCTCCATAAGCTGGTA
AAATACTGCCAGACTAACCCGAAACTCATCAACAAGCGCCCTGTCAACCT
GAGTGAGCAGGTGGAGGAACATCTGGGGCTCCCGTTGGAGAAGGCGGAAG
ATGTGAGGTGCAGTGATTGGACGGTATCTTTGAGTTATCGTCAGGTCCAA
TGTAAGTCTTATTCGTCAACTCTGATGTTTGATAAATGGTTAACGAGTGT
ATGTCTGTAGATGCTGCATCCGATTCTTACGCTTGTATCTGCTTGTTTGA
TACTATGGATGCGAAACGAAAGGCTCTCGACCCTCGACCTCCTTTGCCTG
CTCATGCGGATTTGGATCTGCCGATTCGTATTGTGCGAGAGCCGACCGTG
ACGACGGTCCCGGATGATGTCGAGGTGGTCAAGCCTTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:4060237..4061225-

>ATCC64974_24160-T1 ID=ATCC64974_24160-T1|Name=ATCC64974_24160-T1|organism=Aspergillus niger N402|type=CDS|length=1860bp|location=Sequence derived from alignment at OGUI01000003.1:4060237..4061225- (Aspergillus niger N402)
ATGCTGCATCCGATTCTTACGCTTGTATCTGCTTGTTTGATACTATGGAT
GCGAAACGAAAGGCTCTCGACCCTCGACCTCCTTTGCCTGCTCATGCGGA
TTTGGATCTGCCGATTCGTATTGTGCGAGAGCCGACCGTGACGACGGTCC
CGGATGATGTCGAGGTGGTCAAGCCTTAGATGATTGAGCATATAATCGAC
AGTAAAGATGTCGGAGAAATCCAGACCCCAGAAACTCCAGTATTACTAGC
CAAATCACACACCCTGGCTTCAAGCAACAATGACATAGACGAGCTTGCCC
CGGAAAGCCACCCTCCAACAGAAGAGACAAAACCAGTCCTCTCACCAGCC
GAGGACTCCCCAACACCCAAGTTCTGGAGCCACACCATGCTCAAAAGCCC
TGAAGGCAAAAACATTATCGTGCATTACTGCAAGACACTCAAAAGCAGCG
AAGAAGTTGCGCAACTCTTCCTAAATGACAAAATTCTCGGCTTCGACATG
GAATGGAAAGCCCAGGCCTCCGCCTGGAACAGCATCCAAGACAACGTATC
TCTAATCCAAATCGCAAACAGAGAGCGAATCGCTCTCTTCCACGTTGCCC
TTTTCAGACCAGGCAGAAAGATCAGCGACCTCGTCCCTCCATCGTTGAAA
CAAATCATCGAATCCCCAGACATCACAAAGCTCGGTGTATCAATCAAAGC
AGACTGCACGCGTCTCCGCAAGTACCTCAAGGTCGATGCGCACGGGATCT
TCGAGCTCAGCCACCTCCATAAGCTGGTAAAATACTGCCAGACTAACCCG
AAACTCATCAACAAGCGCCCTGTCAACCTGAGTGAGCAGGTGGAGGAACA
TCTGGGGCTCCCGTTGGAGAAGGCGGAAGATGTGAGGTGCAGTGATTGGA
CGGTATCTTTGAGTTATCGTCAGGTCCAATATGCTGCATCCGATTCTTAC
GCTTGTATCTGCTTGTTTGATACTATGGATGCGAAACGAAAGGCTCTCGA
CCCTCGACCTCCTTTGCCTGCTCATGCGGATTTGGATCTGCCGATTCGTA
TTGTGCGAGAGCCGACCGTGACGACGGTCCCGGATGATGTCGAGGTGGTC
AAGCCTTAGATGATTGAGCATATAATCGACAGTAAAGATGTCGGAGAAAT
CCAGACCCCAGAAACTCCAGTATTACTAGCCAAATCACACACCCTGGCTT
CAAGCAACAATGACATAGACGAGCTTGCCCCGGAAAGCCACCCTCCAACA
GAAGAGACAAAACCAGTCCTCTCACCAGCCGAGGACTCCCCAACACCCAA
GTTCTGGAGCCACACCATGCTCAAAAGCCCTGAAGGCAAAAACATTATCG
TGCATTACTGCAAGACACTCAAAAGCAGCGAAGAAGTTGCGCAACTCTTC
CTAAATGACAAAATTCTCGGCTTCGACATGGAATGGAAAGCCCAGGCCTC
CGCCTGGAACAGCATCCAAGACAACGTATCTCTAATCCAAATCGCAAACA
GAGAGCGAATCGCTCTCTTCCACGTTGCCCTTTTCAGACCAGGCAGAAAG
ATCAGCGACCTCGTCCCTCCATCGTTGAAACAAATCATCGAATCCCCAGA
CATCACAAAGCTCGGTGTATCAATCAAAGCAGACTGCACGCGTCTCCGCA
AGTACCTCAAGGTCGATGCGCACGGGATCTTCGAGCTCAGCCACCTCCAT
AAGCTGGTAAAATACTGCCAGACTAACCCGAAACTCATCAACAAGCGCCC
TGTCAACCTGAGTGAGCAGGTGGAGGAACATCTGGGGCTCCCGTTGGAGA
AGGCGGAAGATGTGAGGTGCAGTGATTGGACGGTATCTTTGAGTTATCGT
CAGGTCCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00084083'-5' exonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_24160ATCC64974_24160Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24160-T1ATCC64974_24160-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24160-T1.cdsATCC64974_24160-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24160-T1.exon2ATCC64974_24160-T1.exon2Aspergillus niger N402exon
ATCC64974_24160-T1.exon1ATCC64974_24160-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR002562
DBxrefPFAM:PF01612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4060237..4061225 -
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