You are here

ATCC64974_26430-T1, ATCC64974_26430-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_26430-T1
Unique NameATCC64974_26430-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4775086..4776452-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_26430-T1 ID=ATCC64974_26430-T1|Name=ATCC64974_26430-T1|organism=Aspergillus niger N402|type=mRNA|length=1367bp|location=Sequence derived from alignment at OGUI01000003.1:4775086..4776452- (Aspergillus niger N402)
ATGTCGCAGCTGTCTTCTAATCCAATCCCATTTTCGGAGCCGCCATATCT CTGCGGGCTTCCTTCGCCCTACTACTCGCCGGGCCATCGTCGCTTTCAGA AAGCGTGTCGCGAATTTTTCTGGGAGCATTTACACAGTCATGCGGCAGAG TATGAGAAGGCCGGACAGGTTCCCGAGCATGTCTTCCACACTTTTTGCAA GCATAACATGCTTCTCCCGAACATCGGTGCGCCCCTGCCGGTGGAATGGC TGAAGCGCTTGGGAATTGCCGACATCCTGGGAGTCAAGGTGGAGGACTGG GACTATATGTACACGGGAATTTATTTTGACGAGGTAGGTATCCCTAATGA ACGACAGGGCACAACTGACAGCTTCAGATGGCACGATCCGGTATGGCTGG GCCGGGTTCATCCCTGAACGCCGGATTCAACTTTGCGATTCCGCCTGTCC TGAAGTATGGCAGCCGGGAGCTGCAGGAACGCTTTCTCCCGGATCTTTTG ACTGGTCGCAAACGCTGCTGTATCGCTATCACGGAGCCAGAGGCAGGCAG CGATGTTGCCAACATCACCACGACAGCGACCAAGACACCAGACGGAAAGT ATTACCTGGTCAATGGCGCGAAGAAGTGGATCACCAACGGGATCTGGTCC GATTTTGCGACCATGGCCGTTCGCACCGGTGGTCCGGGAGCGTCTGGCCT TTCTCTTCTGCTCGTTCCATTGAAGGGGCACCCCGGCGTCACGATGCGCC CGCTCAAGGTCACCGGCCCGATCACTAGTGGAACCACCTACATTGAATTG GACGATGTCAAGGTGGCTGTGGAGAATCTAGTCGGCCGAGAGGGGGACGG CATGCGAATGATCATGACGAACTTCAACCACGAACGCCTTTCGATCGCGG TCGGCGTCACGCGACAGGCTCGTGTGGCCCTGTCCACCGCCTTCCAATAC TGTCTGAAACGAGAGGCCTTTGGCAAAACACTCATGGACCAGCCCGTTGT TCGAAACCGCCTCGCTAGGGCGGGCGCTGAGTTGGAAACGCTGGGGGCCT TCGTTGAGCAGCTCCTCTACCAACTGTGTCATCTTTCCAAGGAAGAGGGG GATCGCAGGCTGGGTGGGATCACTGCCCTCGCCAAGGCCAAAGCGGGAAT GGTGCTGAACGAGTGTGCACAGTGTGCGGTTCTCCTATTTGGTGGATCCG GGTTGACGCAAAGCGGACAGGGCGAGCTGGTCGAGTCGATTCTCCGCGAG GTGCCAGCTGCCCGGATTCCGGGTGGTAGTGAGGATGTTTTGCTTGACCT GGCCGTGCGACAGTTGGTGAAGGTCTATCAAACGGGGCAGAGGGAGTTGA AGCAGTCGAAGTTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:4775086..4776452-

>ATCC64974_26430-T1 ID=ATCC64974_26430-T1|Name=ATCC64974_26430-T1|organism=Aspergillus niger N402|type=CDS|length=2646bp|location=Sequence derived from alignment at OGUI01000003.1:4775086..4776452- (Aspergillus niger N402)
ATGGCACGATCCGGTATGGCTGGGCCGGGTTCATCCCTGAACGCCGGATT
CAACTTTGCGATTCCGCCTGTCCTGAAGTATGGCAGCCGGGAGCTGCAGG
AACGCTTTCTCCCGGATCTTTTGACTGGTCGCAAACGCTGCTGTATCGCT
ATCACGGAGCCAGAGGCAGGCAGCGATGTTGCCAACATCACCACGACAGC
GACCAAGACACCAGACGGAAAGTATTACCTGGTCAATGGCGCGAAGAAGT
GGATCACCAACGGGATCTGGTCCGATTTTGCGACCATGGCCGTTCGCACC
GGTGGTCCGGGAGCGTCTGGCCTTTCTCTTCTGCTCGTTCCATTGAAGGG
GCACCCCGGCGTCACGATGCGCCCGCTCAAGGTCACCGGCCCGATCACTA
GTGGAACCACCTACATTGAATTGGACGATGTCAAGGTGGCTGTGGAGAAT
CTAGTCGGCCGAGAGGGGGACGGCATGCGAATGATCATGACGAACTTCAA
CCACGAACGCCTTTCGATCGCGGTCGGCGTCACGCGACAGGCTCGTGTGG
CCCTGTCCACCGCCTTCCAATACTGTCTGAAACGAGAGGCCTTTGGCAAA
ACACTCATGGACCAGCCCGTTGTTCGAAACCGCCTCGCTAGGGCGGGCGC
TGAGTTGGAAACGCTGGGGGCCTTCGTTGAGCAGCTCCTCTACCAACTGT
GTCATCTTTCCAAGGAAGAGGGGGATCGCAGGCTGGGTGGGATCACTGCC
CTCGCCAAGGCCAAAGCGGGAATGGTGCTGAACGAGTGTGCACAGTGTGC
GGTTCTCCTATTTGGTGGATCCGGGTTGACGCAAAGCGGACAGGGCGAGC
TGGTCGAGTCGATTCTCCGCGAGGTGCCAGCTGCCCGGATTCCGGGTGGT
AGTGAGGATGTTTTGCTTGACCTGGCCGTGCGACAGTTGGTGAAGGTCTA
TCAAACGGGGCAGAGGGAGTTGAAGCAGTCGAAGTTGTAGATGTCGCAGC
TGTCTTCTAATCCAATCCCATTTTCGGAGCCGCCATATCTCTGCGGGCTT
CCTTCGCCCTACTACTCGCCGGGCCATCGTCGCTTTCAGAAAGCGTGTCG
CGAATTTTTCTGGGAGCATTTACACAGTCATGCGGCAGAGTATGAGAAGG
CCGGACAGGTTCCCGAGCATGTCTTCCACACTTTTTGCAAGCATAACATG
CTTCTCCCGAACATCGGTGCGCCCCTGCCGGTGGAATGGCTGAAGCGCTT
GGGAATTGCCGACATCCTGGGAGTCAAGGTGGAGGACTGGGACTATATGT
ACACGGGAATTTATTTTGACGAGATGGCACGATCCGGTATGGCTGGGCCG
GGTTCATCCCTGAACGCCGGATTCAACTTTGCGATTCCGCCTGTCCTGAA
GTATGGCAGCCGGGAGCTGCAGGAACGCTTTCTCCCGGATCTTTTGACTG
GTCGCAAACGCTGCTGTATCGCTATCACGGAGCCAGAGGCAGGCAGCGAT
GTTGCCAACATCACCACGACAGCGACCAAGACACCAGACGGAAAGTATTA
CCTGGTCAATGGCGCGAAGAAGTGGATCACCAACGGGATCTGGTCCGATT
TTGCGACCATGGCCGTTCGCACCGGTGGTCCGGGAGCGTCTGGCCTTTCT
CTTCTGCTCGTTCCATTGAAGGGGCACCCCGGCGTCACGATGCGCCCGCT
CAAGGTCACCGGCCCGATCACTAGTGGAACCACCTACATTGAATTGGACG
ATGTCAAGGTGGCTGTGGAGAATCTAGTCGGCCGAGAGGGGGACGGCATG
CGAATGATCATGACGAACTTCAACCACGAACGCCTTTCGATCGCGGTCGG
CGTCACGCGACAGGCTCGTGTGGCCCTGTCCACCGCCTTCCAATACTGTC
TGAAACGAGAGGCCTTTGGCAAAACACTCATGGACCAGCCCGTTGTTCGA
AACCGCCTCGCTAGGGCGGGCGCTGAGTTGGAAACGCTGGGGGCCTTCGT
TGAGCAGCTCCTCTACCAACTGTGTCATCTTTCCAAGGAAGAGGGGGATC
GCAGGCTGGGTGGGATCACTGCCCTCGCCAAGGCCAAAGCGGGAATGGTG
CTGAACGAGTGTGCACAGTGTGCGGTTCTCCTATTTGGTGGATCCGGGTT
GACGCAAAGCGGACAGGGCGAGCTGGTCGAGTCGATTCTCCGCGAGGTGC
CAGCTGCCCGGATTCCGGGTGGTAGTGAGGATGTTTTGCTTGACCTGGCC
GTGCGACAGTTGGTGAAGGTCTATCAAACGGGGCAGAGGGAGTTGAAGCA
GTCGAAGTTGTAGATGTCGCAGCTGTCTTCTAATCCAATCCCATTTTCGG
AGCCGCCATATCTCTGCGGGCTTCCTTCGCCCTACTACTCGCCGGGCCAT
CGTCGCTTTCAGAAAGCGTGTCGCGAATTTTTCTGGGAGCATTTACACAG
TCATGCGGCAGAGTATGAGAAGGCCGGACAGGTTCCCGAGCATGTCTTCC
ACACTTTTTGCAAGCATAACATGCTTCTCCCGAACATCGGTGCGCCCCTG
CCGGTGGAATGGCTGAAGCGCTTGGGAATTGCCGACATCCTGGGAGTCAA
GGTGGAGGACTGGGACTATATGTACACGGGAATTTATTTTGACGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_26430ATCC64974_26430Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_26430-T1ATCC64974_26430-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_26430-T1.cdsATCC64974_26430-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_26430-T1.exon2ATCC64974_26430-T1.exon2Aspergillus niger N402exon
ATCC64974_26430-T1.exon1ATCC64974_26430-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036250
DBxrefInterPro:IPR009100
DBxrefInterPro:IPR009075
DBxrefInterPro:IPR037069
DBxrefInterPro:IPR013786
DBxrefInterPro:IPR006091
DBxrefPFAM:PF02771
DBxrefPFAM:PF02770
DBxrefPFAM:PF08028
DBxrefPFAM:PF00441
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4775086..4776452 -