You are here

Home

ATCC64974_27280-T1, ATCC64974_27280-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27280-T1
Unique NameATCC64974_27280-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:222332..223598-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27280-T1 ID=ATCC64974_27280-T1|Name=ATCC64974_27280-T1|organism=Aspergillus niger N402|type=mRNA|length=1267bp|location=Sequence derived from alignment at OGUI01000004.1:222332..223598- (Aspergillus niger N402)
ATGTCCGCTCACGGATCCTCCACCAGGGTGCCCTGCACCTACAAGGACTG
CAGCGGTGTCTTTGGTTCGGAGTGGGACATGAAGAGGCACAAGGTGAACG
AACACGACTACTGCAAGCGTTGCGACGAAGACTTCCAGGATGATGAGTAT
CTACTGCTCCACAAGATCAAGAGTGACAAGCATATCGTGTGTGTGGTGTG
TGGGATCGATTTCCGCAGCGAGGGTGGTAGAGACCTCCACACTCGCCAGG
TTAGTATCATTCATTACCACAAATATTTACCATCCACATTATATTCAAGC
TAATACTTTTGGTGTCTATACAGCAACACCGAACTCCGCAGAGCCTGATC
TGTTACGGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCATGGTAAATCA
CGTTGAGAGCGGCGATTGCCCAAACATCCCCTTGTCTAGTCTCCTACAGG
AACAGTCAAAGAGACTCCTCTACCGGGAGACGCTCAAGACAGGAAATGAG
AATGAGAACGCTGACCCCGATTGTCCAGATGACAACGGCGGAGTCCAAAT
CGAGCAGAACCTTTTGGAGATGGACTTTGACAACGACGAGGCCACTCGAT
CTGTTGTGGACGGGGTGGGCGGTCTATCTCTTAACACCAACGTCCCAGAA
TGGAAGAGCAAGTCGTCTATGGCCTCTCCGTCTATGACGAGTGAGATGAG
AGGACGATCAGCATCGGCGGGGAAGATGCCTGCATCGGGTGCCAGGCCAT
CGAGCCCAAGCCCAAGCCCGAGCAATTCATTTGGCAATATCCGCTTCGAT
GCAGGACACACTCTGCGCATGTTGGACCAGAACTGGGACTCTACCGTATA
CTTCAGTTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAGGCTGAATTCT
CCAGCATGAAGGACTTTGAGGAGCATGTGGTAACGAAGACCAACCAGAAC
AGGAGCATTCAGTAAGCGGCTGCATGCTTGCATGACTGTTTTGTCTATGG
TCTGACTCACGGCTTATTAGGTGCCCTGGATGCCTTCGCGTCTTCAAAAC
GGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAGG
TGAACAAAGGGCTCCATTTCAGCCAGGTGATCAATGACATCAGTGGAGGG
CTGGTCAAGTCAGTTGGTCATTTCGAGGACGGAAGCGTTGAGTATGGTGC
TGGCACAATGGGTCCGAAGAAGGTGACTTATAAGAAAGACGAGGAGGGTC
CTAATCTGATGGACTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:222332..223598-

>ATCC64974_27280-T1 ID=ATCC64974_27280-T1|Name=ATCC64974_27280-T1|organism=Aspergillus niger N402|type=CDS|length=3402bp|location=Sequence derived from alignment at OGUI01000004.1:222332..223598- (Aspergillus niger N402)
GTGCCCTGGATGCCTTCGCGTCTTCAAAACGGCGGCTGCCCTGGTGGCTC
ATTGCGAGTCGGCCAGTACTCGGTGCAAGGTGAACAAAGGGCTCCATTTC
AGCCAGGTGATCAATGACATCAGTGGAGGGCTGGTCAAGTCAGTTGGTCA
TTTCGAGGACGGAAGCGTTGAGTATGGTGCTGGCACAATGGGTCCGAAGA
AGGTGACTTATAAGAAAGACGAGGAGGGTCCTAATCTGATGGACTGACAA
CACCGAACTCCGCAGAGCCTGATCTGTTACGGCTGCGGGCAGAGGTTCAG
ACAGGCAGGTGCCATGGTAAATCACGTTGAGAGCGGCGATTGCCCAAACA
TCCCCTTGTCTAGTCTCCTACAGGAACAGTCAAAGAGACTCCTCTACCGG
GAGACGCTCAAGACAGGAAATGAGAATGAGAACGCTGACCCCGATTGTCC
AGATGACAACGGCGGAGTCCAAATCGAGCAGAACCTTTTGGAGATGGACT
TTGACAACGACGAGGCCACTCGATCTGTTGTGGACGGGGTGGGCGGTCTA
TCTCTTAACACCAACGTCCCAGAATGGAAGAGCAAGTCGTCTATGGCCTC
TCCGTCTATGACGAGTGAGATGAGAGGACGATCAGCATCGGCGGGGAAGA
TGCCTGCATCGGGTGCCAGGCCATCGAGCCCAAGCCCAAGCCCGAGCAAT
TCATTTGGCAATATCCGCTTCGATGCAGGACACACTCTGCGCATGTTGGA
CCAGAACTGGGACTCTACCGTATACTTCAGTTCCTTTTCCGGAAAGTTTA
TCTGTCCCTGTAAGGCTGAATTCTCCAGCATGAAGGACTTTGAGGAGCAT
GTGGTAACGAAGACCAACCAGAACAGGAGCATTCAATGTCCGCTCACGGA
TCCTCCACCAGGGTGCCCTGCACCTACAAGGACTGCAGCGGTGTCTTTGG
TTCGGAGTGGGACATGAAGAGGCACAAGGTGAACGAACACGACTACTGCA
AGCGTTGCGACGAAGACTTCCAGGATGATGAGTATCTACTGCTCCACAAG
ATCAAGAGTGACAAGCATATCGTGTGTGTGGTGTGTGGGATCGATTTCCG
CAGCGAGGGTGGTAGAGACCTCCACACTCGCCAGGTGCCCTGGATGCCTT
CGCGTCTTCAAAACGGCGGCTGCCCTGGTGGCTCATTGCGAGTCGGCCAG
TACTCGGTGCAAGGTGAACAAAGGGCTCCATTTCAGCCAGGTGATCAATG
ACATCAGTGGAGGGCTGGTCAAGTCAGTTGGTCATTTCGAGGACGGAAGC
GTTGAGTATGGTGCTGGCACAATGGGTCCGAAGAAGGTGACTTATAAGAA
AGACGAGGAGGGTCCTAATCTGATGGACTGACAACACCGAACTCCGCAGA
GCCTGATCTGTTACGGCTGCGGGCAGAGGTTCAGACAGGCAGGTGCCATG
GTAAATCACGTTGAGAGCGGCGATTGCCCAAACATCCCCTTGTCTAGTCT
CCTACAGGAACAGTCAAAGAGACTCCTCTACCGGGAGACGCTCAAGACAG
GAAATGAGAATGAGAACGCTGACCCCGATTGTCCAGATGACAACGGCGGA
GTCCAAATCGAGCAGAACCTTTTGGAGATGGACTTTGACAACGACGAGGC
CACTCGATCTGTTGTGGACGGGGTGGGCGGTCTATCTCTTAACACCAACG
TCCCAGAATGGAAGAGCAAGTCGTCTATGGCCTCTCCGTCTATGACGAGT
GAGATGAGAGGACGATCAGCATCGGCGGGGAAGATGCCTGCATCGGGTGC
CAGGCCATCGAGCCCAAGCCCAAGCCCGAGCAATTCATTTGGCAATATCC
GCTTCGATGCAGGACACACTCTGCGCATGTTGGACCAGAACTGGGACTCT
ACCGTATACTTCAGTTCCTTTTCCGGAAAGTTTATCTGTCCCTGTAAGGC
TGAATTCTCCAGCATGAAGGACTTTGAGGAGCATGTGGTAACGAAGACCA
ACCAGAACAGGAGCATTCAATGTCCGCTCACGGATCCTCCACCAGGGTGC
CCTGCACCTACAAGGACTGCAGCGGTGTCTTTGGTTCGGAGTGGGACATG
AAGAGGCACAAGGTGAACGAACACGACTACTGCAAGCGTTGCGACGAAGA
CTTCCAGGATGATGAGTATCTACTGCTCCACAAGATCAAGAGTGACAAGC
ATATCGTGTGTGTGGTGTGTGGGATCGATTTCCGCAGCGAGGGTGGTAGA
GACCTCCACACTCGCCAGGTGCCCTGGATGCCTTCGCGTCTTCAAAACGG
CGGCTGCCCTGGTGGCTCATTGCGAGTCGGCCAGTACTCGGTGCAAGGTG
AACAAAGGGCTCCATTTCAGCCAGGTGATCAATGACATCAGTGGAGGGCT
GGTCAAGTCAGTTGGTCATTTCGAGGACGGAAGCGTTGAGTATGGTGCTG
GCACAATGGGTCCGAAGAAGGTGACTTATAAGAAAGACGAGGAGGGTCCT
AATCTGATGGACTGACAACACCGAACTCCGCAGAGCCTGATCTGTTACGG
CTGCGGGCAGAGGTTCAGACAGGCAGGTGCCATGGTAAATCACGTTGAGA
GCGGCGATTGCCCAAACATCCCCTTGTCTAGTCTCCTACAGGAACAGTCA
AAGAGACTCCTCTACCGGGAGACGCTCAAGACAGGAAATGAGAATGAGAA
CGCTGACCCCGATTGTCCAGATGACAACGGCGGAGTCCAAATCGAGCAGA
ACCTTTTGGAGATGGACTTTGACAACGACGAGGCCACTCGATCTGTTGTG
GACGGGGTGGGCGGTCTATCTCTTAACACCAACGTCCCAGAATGGAAGAG
CAAGTCGTCTATGGCCTCTCCGTCTATGACGAGTGAGATGAGAGGACGAT
CAGCATCGGCGGGGAAGATGCCTGCATCGGGTGCCAGGCCATCGAGCCCA
AGCCCAAGCCCGAGCAATTCATTTGGCAATATCCGCTTCGATGCAGGACA
CACTCTGCGCATGTTGGACCAGAACTGGGACTCTACCGTATACTTCAGTT
CCTTTTCCGGAAAGTTTATCTGTCCCTGTAAGGCTGAATTCTCCAGCATG
AAGGACTTTGAGGAGCATGTGGTAACGAAGACCAACCAGAACAGGAGCAT
TCAATGTCCGCTCACGGATCCTCCACCAGGGTGCCCTGCACCTACAAGGA
CTGCAGCGGTGTCTTTGGTTCGGAGTGGGACATGAAGAGGCACAAGGTGA
ACGAACACGACTACTGCAAGCGTTGCGACGAAGACTTCCAGGATGATGAG
TATCTACTGCTCCACAAGATCAAGAGTGACAAGCATATCGTGTGTGTGGT
GTGTGGGATCGATTTCCGCAGCGAGGGTGGTAGAGACCTCCACACTCGCC
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27280ATCC64974_27280Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27280-T1ATCC64974_27280-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27280-T1.cdsATCC64974_27280-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27280-T1.exon3ATCC64974_27280-T1.exon3Aspergillus niger N402exon
ATCC64974_27280-T1.exon2ATCC64974_27280-T1.exon2Aspergillus niger N402exon
ATCC64974_27280-T1.exon1ATCC64974_27280-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:222332..223598 -
Powered by Drupal