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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:226220..228004+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_27300-T1 ID=ATCC64974_27300-T1|Name=ATCC64974_27300-T1|organism=Aspergillus niger N402|type=mRNA|length=1785bp|location=Sequence derived from alignment at OGUI01000004.1:226220..228004+ (Aspergillus niger N402)
ATGAGTCTTCACGATCCCGTGCTACAAACAGATACCGATTCTTGGTTCCT
GGGGGCAGACTTTGATGTCAATGCATTGGACTTCTCCATCTCATCGGCAA
TATCGGAATGGGCGCAACTGCCTTCCACGCCACACATGTTAGGCTCTGTT
GGCTTAGGAGAAGAGCCGCTGCATTCCGTACCAACGCCCTACGCAAAGGG
GAACGGCAATGATCCTCGTCCAGCAGACATTGTAAGGAAGAGATGGTTTA
CCTGCTTGTCTCCACCAGAGGTGAATCATTTCGTCTACAGAGGACCTAAT
CGTCCCAGTGACTCCTTCCCTCAAGGGAGGATTGATGCCGATGACAACTA
TAGAGCTGGTCTCTCCCAGAGGCTAAAGCCCCGCATGCATGATGAAGCAC
TGCCCTCTGCGGAGCAATTGAACCTCTTTGCAAAACTCTTCTTCAGTCGA
TTCCACTCTCTATTTCCGGTCATACATGCGCCCACATTCCGTCCGACCGC
GGAAAATTCGTTGCTATTCTTATCAATCTGCTCAATAGGCAGTCTCTTTG
TGGGTTCATCCCATGCAGTGGCACAAGGCCTGAGGATTTTTGAAAGACTG
AACAAAGCAATTCTGGCCTCGTGGGAGGCCATCCTGGCCCATAGCCAACC
GGATGCCTTGTCGATGGTGCAAGCTGCCATTCTGGGCCAGACTTATGGAA
TTTTGTCCGGAAGGCCCAAGGACTTGGTCCTGGCTGATGTCCTGCATGGT
ACTGTGATGGGATGGGCTCGCGAGTCCAATAAATACGCCACTCTTGGCCA
TGGCCAGATTCTCGATGACTGTTCGACCGAACAAGAGCTGATCGAGCAGT
GGCACCGATGGGCCGAGGCGGAACAGAGAAGACGGGTCGAAATCGCCCTG
AATATACACGACGCAGAGCTTGCTAGTCTGATGCACCATGAACCTATTCG
CAAACATCGATTCTCACAATATCCGCTGCTAGCCTCTGAACCTATGTTCA
TGGCCCCGACAGCCGCCCGATGGGCCGATATATTCAAACAGTCACCGTCA
TATACCAAATTAAGCCTGAGCCCCGACCTTCACTTTCACTCCGCCGGGCA
TGATTCCAGGTTTGCTATCTACAGTGTGTTGGAGAGTATAAACGCCCATG
TTATCGAAGCTCGCCTCTCAGGCACCCTAGATAGAGGTAGATCACATAAT
CTATCTGGCCTACTAATGCATTGGTGGAGTAAATATAGCCTACAATACAT
CCAGAATGAGGAAGAGGACCCCTTCAGTCTTCCAGTCCTGTGGCACTCGA
TTTACATGTCTCTTTACAGCGACATGGACCTGCTTGAACGAGCAGTGGGT
CGTAATGGGCATGCAGCTGCCACTGGATCTCAGGACCCAGTCCAAACGTG
GGCAGGCTCCCTGGATGCCAGTAAGTGCTTGGTACATGCGCTGTTGATAC
AGCGTTACCTCGAGAGGATGCGGATTTCCTCTGAACCCGCAATACACGTT
CCCGGGGCTCTATTTTCTGCTGCTCTCGCATGGCTCTGCTTCACGAGAAT
TGGGCAACAGCAATCCATCAATCTGAAAGCTTTTGATGCCCCAGAAATCC
AGCTCCTGGGCAGTGAGTCCGCTTTGCAGGAGGCTCAAGGGCAGGCATTT
GGAGACTCTGCATTTGCAGATGTTAATCATTTACATCGACTGATTGACCT
TCTGCACCGTTTTGGGCGCTGGACGATCTCCAAAACATTCGCCACTGTGC
TGTGCACCGCTTTGGAAGAGGTTAGGGAAGAATGA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:226220..228004+ >ATCC64974_27300-T1 ID=ATCC64974_27300-T1|Name=ATCC64974_27300-T1|organism=Aspergillus niger N402|type=CDS|length=1785bp|location=Sequence derived from alignment at OGUI01000004.1:226220..228004+ (Aspergillus niger N402)
ATGAGTCTTCACGATCCCGTGCTACAAACAGATACCGATTCTTGGTTCCT
GGGGGCAGACTTTGATGTCAATGCATTGGACTTCTCCATCTCATCGGCAA
TATCGGAATGGGCGCAACTGCCTTCCACGCCACACATGTTAGGCTCTGTT
GGCTTAGGAGAAGAGCCGCTGCATTCCGTACCAACGCCCTACGCAAAGGG
GAACGGCAATGATCCTCGTCCAGCAGACATTGTAAGGAAGAGATGGTTTA
CCTGCTTGTCTCCACCAGAGGTGAATCATTTCGTCTACAGAGGACCTAAT
CGTCCCAGTGACTCCTTCCCTCAAGGGAGGATTGATGCCGATGACAACTA
TAGAGCTGGTCTCTCCCAGAGGCTAAAGCCCCGCATGCATGATGAAGCAC
TGCCCTCTGCGGAGCAATTGAACCTCTTTGCAAAACTCTTCTTCAGTCGA
TTCCACTCTCTATTTCCGGTCATACATGCGCCCACATTCCGTCCGACCGC
GGAAAATTCGTTGCTATTCTTATCAATCTGCTCAATAGGCAGTCTCTTTG
TGGGTTCATCCCATGCAGTGGCACAAGGCCTGAGGATTTTTGAAAGACTG
AACAAAGCAATTCTGGCCTCGTGGGAGGCCATCCTGGCCCATAGCCAACC
GGATGCCTTGTCGATGGTGCAAGCTGCCATTCTGGGCCAGACTTATGGAA
TTTTGTCCGGAAGGCCCAAGGACTTGGTCCTGGCTGATGTCCTGCATGGT
ACTGTGATGGGATGGGCTCGCGAGTCCAATAAATACGCCACTCTTGGCCA
TGGCCAGATTCTCGATGACTGTTCGACCGAACAAGAGCTGATCGAGCAGT
GGCACCGATGGGCCGAGGCGGAACAGAGAAGACGGGTCGAAATCGCCCTG
AATATACACGACGCAGAGCTTGCTAGTCTGATGCACCATGAACCTATTCG
CAAACATCGATTCTCACAATATCCGCTGCTAGCCTCTGAACCTATGTTCA
TGGCCCCGACAGCCGCCCGATGGGCCGATATATTCAAACAGTCACCGTCA
TATACCAAATTAAGCCTGAGCCCCGACCTTCACTTTCACTCCGCCGGGCA
TGATTCCAGGTTTGCTATCTACAGTGTGTTGGAGAGTATAAACGCCCATG
TTATCGAAGCTCGCCTCTCAGGCACCCTAGATAGAGGTAGATCACATAAT
CTATCTGGCCTACTAATGCATTGGTGGAGTAAATATAGCCTACAATACAT
CCAGAATGAGGAAGAGGACCCCTTCAGTCTTCCAGTCCTGTGGCACTCGA
TTTACATGTCTCTTTACAGCGACATGGACCTGCTTGAACGAGCAGTGGGT
CGTAATGGGCATGCAGCTGCCACTGGATCTCAGGACCCAGTCCAAACGTG
GGCAGGCTCCCTGGATGCCAGTAAGTGCTTGGTACATGCGCTGTTGATAC
AGCGTTACCTCGAGAGGATGCGGATTTCCTCTGAACCCGCAATACACGTT
CCCGGGGCTCTATTTTCTGCTGCTCTCGCATGGCTCTGCTTCACGAGAAT
TGGGCAACAGCAATCCATCAATCTGAAAGCTTTTGATGCCCCAGAAATCC
AGCTCCTGGGCAGTGAGTCCGCTTTGCAGGAGGCTCAAGGGCAGGCATTT
GGAGACTCTGCATTTGCAGATGTTAATCATTTACATCGACTGATTGACCT
TCTGCACCGTTTTGGGCGCTGGACGATCTCCAAAACATTCGCCACTGTGC
TGTGCACCGCTTTGGAAGAGGTTAGGGAAGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_27300-T1 | ATCC64974_27300-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:226220..228004 + |
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