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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:369371..371215- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_27720-T1 ID=ATCC64974_27720-T1|Name=ATCC64974_27720-T1|organism=Aspergillus niger N402|type=mRNA|length=1845bp|location=Sequence derived from alignment at OGUI01000004.1:369371..371215- (Aspergillus niger N402)
ATGCCTCCGAAAGGTGCTCCCCGACGAGGAGCACCGGCCGGCGCAGCCAG
CCGCGCCAATGCATCTACAACCGCCTCCGCGAGTCCCGCGCCCAGCGCCA
CCACCACGGGCGACTCCCAGACTCCAACACCCGGCCCATCAGCCTCCGGG
CGAGCCCCCGTCCAGCGCCTTCAATCGCTCAAGAAACGCACACCCTCCGG
CAGCATCGGACCGGCCGCGAAACCCCCCGGCGCGCCCGCTGCGCCCGGCG
AACCTGCCAAGCCCACACTCAAATACAAGCCGCGCGCCGTCGGCCGTCGC
AGCAAGGAGGAGCGAGAAGCCATCGAGAAGCTCGAAGCCGAGCGGCACCG
CGAGCGCCTGAAGGAGGCGGCGGCGATTCAGCGCGGCCGGGATCAAGGCG
GTCCTGGTGGTCGCGGTGGGTTTGGGCGCGGGCGTGGCGGACCTTTGGGG
TCTGCGGGCGGGCCATTGGGCTCGGGGATGTCTGGGCGTCGGGGTAGAGG
AGGACGGTTTGGACAGGATTCGAGACATTCGTCTATGTCGAGACGCAGTC
GGTCGGTCATTGATCTGGGAAATACGGCGGCGGGTGCGGGGACGCGCGAT
TACTCGTCAGATGAGAGTGATGGCGAGGTGCGCATCAGTATTGACCAGAT
CAATTTGGATAGTGATGAGGAGGATCAGGAGCAGATGATGGTCGATAGCA
AGAAGGGGAAGGCGGCGGTTAAGTATGCCGATGCTGAGAAGGGGTTACGG
CCTATTCGCGTCGAGAGACATGAGCATGAGGAGCGCGTGGTCAGTGTCAA
TATGGAGTCGAGCTCGAGCAAGTCGGCGGAGCTGAGGGAGAAGGCTAAGG
CGCAGGCGAAGGAGGATGATGGTGCGCTCTTTGTGCAGCAGAATGATGAT
GATGCTGCGGCTACTACGGAAGGAGAGCCCAAGGTCAAGTCTGAGCCTAC
GGATGATGATGATCAGGTCATGACAGATGTTCCGCATGCCGAGGAGCCAG
CTACGACGGATGATGGATTGCTGCCGGTACAGAAGGTCAAGGTGCGCAGG
AAAATCACACCCCCGTCGAACGAGGCGACACCCCAGCCCGAAATGGAGAT
CCCTGCTGCCGTGAAGGACCCGAAGAGTTTACTACGCACGAAGGAGGATA
TCGAAGAGTACGAGCGACACGAGCAGGACCTGGAGATTGTCAAGGACCTC
TTCCAGAAGGAGCCCGAACCTGAAAAATCGGAGACCACCACCCCGGCAGA
GGGAGAGGCCCCTGCTGTGGTTGCGAATGACCAGGACAAGGACAAGGACA
GTACAATGGAGGACAAGGACAAGGAACAGGAGGAAGAGGATGTCAACAAG
GACAAGTTGGCGGGGCAGCTGTTCCTGATGCAATTCCCACCGATGACGCC
GAACCTGGTGGTACCGGGCAACAACGAGAATCCAGCGGATGAAGCTACAG
ATGCGATGGCGGGGCAGAGCGCACCGGAGGCCAGTGGGTCGGAGCAGACA
GGCGTCAAGCGCGAAGATGGCGTGGAGATCCTCGAAGGTGGAGAGGATGC
CACGGCAACAGGGACGTCATCCAAGATTGTCACTGCAACCGACTGGGGCC
TCAGCGCCGGGCGCGTCGGCAAGCTGAACGTCCATGCGTCGGGTCGGGTG
ACGATGGACTGGGGAGGCATCAGCTTCGAGCTGGATCGCGCAACAGCCGT
GGACTTTCTCCAGGAAGCGTTGATCGTGTCGACCCCGCCTAATGCAGCGG
ACGAGGAATTCCCGGATGATGAAAAGAAGGTGTGGGCGATGGGACAGCTG
AGTGGGAAGTTTACGGTGACACCGGACTGGGGGAAGATGCTGTAA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:369371..371215- >ATCC64974_27720-T1 ID=ATCC64974_27720-T1|Name=ATCC64974_27720-T1|organism=Aspergillus niger N402|type=CDS|length=1845bp|location=Sequence derived from alignment at OGUI01000004.1:369371..371215- (Aspergillus niger N402)
ATGCCTCCGAAAGGTGCTCCCCGACGAGGAGCACCGGCCGGCGCAGCCAG
CCGCGCCAATGCATCTACAACCGCCTCCGCGAGTCCCGCGCCCAGCGCCA
CCACCACGGGCGACTCCCAGACTCCAACACCCGGCCCATCAGCCTCCGGG
CGAGCCCCCGTCCAGCGCCTTCAATCGCTCAAGAAACGCACACCCTCCGG
CAGCATCGGACCGGCCGCGAAACCCCCCGGCGCGCCCGCTGCGCCCGGCG
AACCTGCCAAGCCCACACTCAAATACAAGCCGCGCGCCGTCGGCCGTCGC
AGCAAGGAGGAGCGAGAAGCCATCGAGAAGCTCGAAGCCGAGCGGCACCG
CGAGCGCCTGAAGGAGGCGGCGGCGATTCAGCGCGGCCGGGATCAAGGCG
GTCCTGGTGGTCGCGGTGGGTTTGGGCGCGGGCGTGGCGGACCTTTGGGG
TCTGCGGGCGGGCCATTGGGCTCGGGGATGTCTGGGCGTCGGGGTAGAGG
AGGACGGTTTGGACAGGATTCGAGACATTCGTCTATGTCGAGACGCAGTC
GGTCGGTCATTGATCTGGGAAATACGGCGGCGGGTGCGGGGACGCGCGAT
TACTCGTCAGATGAGAGTGATGGCGAGGTGCGCATCAGTATTGACCAGAT
CAATTTGGATAGTGATGAGGAGGATCAGGAGCAGATGATGGTCGATAGCA
AGAAGGGGAAGGCGGCGGTTAAGTATGCCGATGCTGAGAAGGGGTTACGG
CCTATTCGCGTCGAGAGACATGAGCATGAGGAGCGCGTGGTCAGTGTCAA
TATGGAGTCGAGCTCGAGCAAGTCGGCGGAGCTGAGGGAGAAGGCTAAGG
CGCAGGCGAAGGAGGATGATGGTGCGCTCTTTGTGCAGCAGAATGATGAT
GATGCTGCGGCTACTACGGAAGGAGAGCCCAAGGTCAAGTCTGAGCCTAC
GGATGATGATGATCAGGTCATGACAGATGTTCCGCATGCCGAGGAGCCAG
CTACGACGGATGATGGATTGCTGCCGGTACAGAAGGTCAAGGTGCGCAGG
AAAATCACACCCCCGTCGAACGAGGCGACACCCCAGCCCGAAATGGAGAT
CCCTGCTGCCGTGAAGGACCCGAAGAGTTTACTACGCACGAAGGAGGATA
TCGAAGAGTACGAGCGACACGAGCAGGACCTGGAGATTGTCAAGGACCTC
TTCCAGAAGGAGCCCGAACCTGAAAAATCGGAGACCACCACCCCGGCAGA
GGGAGAGGCCCCTGCTGTGGTTGCGAATGACCAGGACAAGGACAAGGACA
GTACAATGGAGGACAAGGACAAGGAACAGGAGGAAGAGGATGTCAACAAG
GACAAGTTGGCGGGGCAGCTGTTCCTGATGCAATTCCCACCGATGACGCC
GAACCTGGTGGTACCGGGCAACAACGAGAATCCAGCGGATGAAGCTACAG
ATGCGATGGCGGGGCAGAGCGCACCGGAGGCCAGTGGGTCGGAGCAGACA
GGCGTCAAGCGCGAAGATGGCGTGGAGATCCTCGAAGGTGGAGAGGATGC
CACGGCAACAGGGACGTCATCCAAGATTGTCACTGCAACCGACTGGGGCC
TCAGCGCCGGGCGCGTCGGCAAGCTGAACGTCCATGCGTCGGGTCGGGTG
ACGATGGACTGGGGAGGCATCAGCTTCGAGCTGGATCGCGCAACAGCCGT
GGACTTTCTCCAGGAAGCGTTGATCGTGTCGACCCCGCCTAATGCAGCGG
ACGAGGAATTCCCGGATGATGAAAAGAAGGTGTGGGCGATGGGACAGCTG
AGTGGGAAGTTTACGGTGACACCGGACTGGGGGAAGATGCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005666 | RNA polymerase III complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006383 | transcription by RNA polymerase III |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_27720-T1 | ATCC64974_27720-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007811 |
| DBxref | PFAM:PF05132 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:369371..371215 - |
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