You are here

Home

ATCC64974_27970-T1, ATCC64974_27970-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27970-T1
Unique NameATCC64974_27970-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:447718..448943+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27970-T1 ID=ATCC64974_27970-T1|Name=ATCC64974_27970-T1|organism=Aspergillus niger N402|type=mRNA|length=1226bp|location=Sequence derived from alignment at OGUI01000004.1:447718..448943+ (Aspergillus niger N402)
ATGTACTATGAGCAAAAAGTCCAGTCCACGCTGATGGAACAATTAGACAT
CCACGAATACCTCCACGGCCCGTCCACCATCCCGAGCACAACGCACCCCA
TAACGGGGGAAAAGATCCCCGTGACACTAGGCCACGAGTTCAGCGGCACG
ATTATAGAAGTAGGGGAGGGTGTGACTCGTCTCCAGGTTGGTGATAATGT
GGCTATTAAGCCGAATCTGTTCGATGGAGGGTGTGCGGCTTGTCTGGGGG
GTTGGGTGAATTGTTGTGATAATTTGGGGTTTGTGGGGTTTAGTGGTATC
TCTCTCTCTCTTCTTTCTTACTTTTGTTTTGGTTGGTGGTGGTGTCTATT
TGAGAGTTTGGCTGACTGTACAACAGGTAGTGCTGGTGGATTATCAGATT
ATGTTGTTGTCAAGGAGGATAGGGCTGTAAGGTTGCCGGAGGGGTTTGAT
TTGGATCTTGGAGGTGAGTTGACTATCTTTTACTATTGAATGTTGATTGG
GGTATTGATGTGGTGCTAATTGTGTAGCACTCGTGGAGCCGTTGACTGTG
GCATGGCATGCAGTCAATCGGTCTTCTATTCAAAATGATCATGCGCGTAC
GGCACTGGTGGTGGGTGCCGGGCCTATTGGGCTTGCTGTACTTCTGGTTC
TTAAGGCCCGCGGCATTGAGTCCGTTGTCGTCGTGGAGGTCTCGTCGCAG
CGGAGGGAACTTGCTAGCTCTTTGGGCGCTACGCGGGTTCTTGACCCCCG
GACGGCCGATGTTGTGGGCACGGTGCGTGCGATGACGGGCAATGCCGGAG
CTGATATAGCATTTGAATGCTCTGCAGTGCAAGCAGGTTTAGACACCGCT
TTGAAGGGGATTCGAGCACGGGGCACAATGACGATTTTATCTCTCTGGAG
TGAGAAGCCGGCAATCGATGCATTTGACGTGGTACTAGGCGAAAAGCACG
TGGTAGGGTCGGTGATATATGAAGACGGAGAATTTGAGGCCGTCATCGAA
GCTATGTGGTCAGGTACGTGACTGCCAGAACCATGACCTACACATGCCAG
CCATGCTTAACTATATCCACACGTTATACCGAAACTGACTGAACACAGGC
AAACTCAACCCTCGGGCCTTAATCACCAGTAAAATCCGCATGGAGGACAT
CGTAGAAAAAGGCTTCAAAACGTTAATCCACGGCCGAGACAACCAAATCA
AGATCTTGGTGGACATTTCTGCATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:447718..448943+

>ATCC64974_27970-T1 ID=ATCC64974_27970-T1|Name=ATCC64974_27970-T1|organism=Aspergillus niger N402|type=CDS|length=3984bp|location=Sequence derived from alignment at OGUI01000004.1:447718..448943+ (Aspergillus niger N402)
ATGTACTATGAGCAAAAAGTCCAGTCCACGCTGATGGAACAATTAGACAT
CCACGAATACCTCCACGGCCCGTCCACCATCCCGAGCACAACGCACCCCA
TAACGGGGGAAAAGATCCCCGTGACACTAGGCCACGAGTTCAGCGGCACG
ATTATAGAAGTAGGGGAGGGTGTGACTCGTCTCCAGGTTGGTGATAATGT
GGCTATTAAGCCGAATCTGTTCGATGGAGGGTGTGCGGCTTGTCTGGGGG
GTTGGGTGAATTGTTGTGATAATTTGGGGTTTGTGGGGTTTAGTGGTAGT
GCTGGTGGATTATCAGATTATGTTGTTGTCAAGGAGGATAGGGCTGTAAG
GTTGCCGGAGGGGTTTGATTTGGATCTTGGAGCACTCGTGGAGCCGTTGA
CTGTGGCATGGCATGCAGTCAATCGGTCTTCTATTCAAAATGATCATGCG
CGTACGGCACTGGTGGTGGGTGCCGGGCCTATTGGGCTTGCTGTACTTCT
GGTTCTTAAGGCCCGCGGCATTGAGTCCGTTGTCGTCGTGGAGGTCTCGT
CGCAGCGGAGGGAACTTGCTAGCTCTTTGGGCGCTACGCGGGTTCTTGAC
CCCCGGACGGCCGATGTTGTGGGCACGGTGCGTGCGATGACGGGCAATGC
CGGAGCTGATATAGCATTTGAATGCTCTGCAGTGCAAGCAGGTTTAGACA
CCGCTTTGAAGGGGATTCGAGCACGGGGCACAATGACGATTTTATCTCTC
TGGAGTGAGAAGCCGGCAATCGATGCATTTGACGTGGTACTAGGCGAAAA
GCACGTGGTAGGGTCGGTGATATATGAAGACGGAGAATTTGAGGCCGTCA
TCGAAGCTATGTGGTCAGGCAAACTCAACCCTCGGGCCTTAATCACCAGT
AAAATCCGCATGGAGGACATCGTAGAAAAAGGCTTCAAAACGTTAATCCA
CGGCCGAGACAACCAAATCAAGATCTTGGTGGACATTTCTGCATGAATGT
ACTATGAGCAAAAAGTCCAGTCCACGCTGATGGAACAATTAGACATCCAC
GAATACCTCCACGGCCCGTCCACCATCCCGAGCACAACGCACCCCATAAC
GGGGGAAAAGATCCCCGTGACACTAGGCCACGAGTTCAGCGGCACGATTA
TAGAAGTAGGGGAGGGTGTGACTCGTCTCCAGGTTGGTGATAATGTGGCT
ATTAAGCCGAATCTGTTCGATGGAGGGTGTGCGGCTTGTCTGGGGGGTTG
GGTGAATTGTTGTGATAATTTGGGGTTTGTGGGGTTTAGTGGTAGTGCTG
GTGGATTATCAGATTATGTTGTTGTCAAGGAGGATAGGGCTGTAAGGTTG
CCGGAGGGGTTTGATTTGGATCTTGGAGCACTCGTGGAGCCGTTGACTGT
GGCATGGCATGCAGTCAATCGGTCTTCTATTCAAAATGATCATGCGCGTA
CGGCACTGGTGGTGGGTGCCGGGCCTATTGGGCTTGCTGTACTTCTGGTT
CTTAAGGCCCGCGGCATTGAGTCCGTTGTCGTCGTGGAGGTCTCGTCGCA
GCGGAGGGAACTTGCTAGCTCTTTGGGCGCTACGCGGGTTCTTGACCCCC
GGACGGCCGATGTTGTGGGCACGGTGCGTGCGATGACGGGCAATGCCGGA
GCTGATATAGCATTTGAATGCTCTGCAGTGCAAGCAGGTTTAGACACCGC
TTTGAAGGGGATTCGAGCACGGGGCACAATGACGATTTTATCTCTCTGGA
GTGAGAAGCCGGCAATCGATGCATTTGACGTGGTACTAGGCGAAAAGCAC
GTGGTAGGGTCGGTGATATATGAAGACGGAGAATTTGAGGCCGTCATCGA
AGCTATGTGGTCAGGCAAACTCAACCCTCGGGCCTTAATCACCAGTAAAA
TCCGCATGGAGGACATCGTAGAAAAAGGCTTCAAAACGTTAATCCACGGC
CGAGACAACCAAATCAAGATCTTGGTGGACATTTCTGCATGAATGTACTA
TGAGCAAAAAGTCCAGTCCACGCTGATGGAACAATTAGACATCCACGAAT
ACCTCCACGGCCCGTCCACCATCCCGAGCACAACGCACCCCATAACGGGG
GAAAAGATCCCCGTGACACTAGGCCACGAGTTCAGCGGCACGATTATAGA
AGTAGGGGAGGGTGTGACTCGTCTCCAGGTTGGTGATAATGTGGCTATTA
AGCCGAATCTGTTCGATGGAGGGTGTGCGGCTTGTCTGGGGGGTTGGGTG
AATTGTTGTGATAATTTGGGGTTTGTGGGGTTTAGTGGTAGTGCTGGTGG
ATTATCAGATTATGTTGTTGTCAAGGAGGATAGGGCTGTAAGGTTGCCGG
AGGGGTTTGATTTGGATCTTGGAGCACTCGTGGAGCCGTTGACTGTGGCA
TGGCATGCAGTCAATCGGTCTTCTATTCAAAATGATCATGCGCGTACGGC
ACTGGTGGTGGGTGCCGGGCCTATTGGGCTTGCTGTACTTCTGGTTCTTA
AGGCCCGCGGCATTGAGTCCGTTGTCGTCGTGGAGGTCTCGTCGCAGCGG
AGGGAACTTGCTAGCTCTTTGGGCGCTACGCGGGTTCTTGACCCCCGGAC
GGCCGATGTTGTGGGCACGGTGCGTGCGATGACGGGCAATGCCGGAGCTG
ATATAGCATTTGAATGCTCTGCAGTGCAAGCAGGTTTAGACACCGCTTTG
AAGGGGATTCGAGCACGGGGCACAATGACGATTTTATCTCTCTGGAGTGA
GAAGCCGGCAATCGATGCATTTGACGTGGTACTAGGCGAAAAGCACGTGG
TAGGGTCGGTGATATATGAAGACGGAGAATTTGAGGCCGTCATCGAAGCT
ATGTGGTCAGGCAAACTCAACCCTCGGGCCTTAATCACCAGTAAAATCCG
CATGGAGGACATCGTAGAAAAAGGCTTCAAAACGTTAATCCACGGCCGAG
ACAACCAAATCAAGATCTTGGTGGACATTTCTGCATGAATGTACTATGAG
CAAAAAGTCCAGTCCACGCTGATGGAACAATTAGACATCCACGAATACCT
CCACGGCCCGTCCACCATCCCGAGCACAACGCACCCCATAACGGGGGAAA
AGATCCCCGTGACACTAGGCCACGAGTTCAGCGGCACGATTATAGAAGTA
GGGGAGGGTGTGACTCGTCTCCAGGTTGGTGATAATGTGGCTATTAAGCC
GAATCTGTTCGATGGAGGGTGTGCGGCTTGTCTGGGGGGTTGGGTGAATT
GTTGTGATAATTTGGGGTTTGTGGGGTTTAGTGGTAGTGCTGGTGGATTA
TCAGATTATGTTGTTGTCAAGGAGGATAGGGCTGTAAGGTTGCCGGAGGG
GTTTGATTTGGATCTTGGAGCACTCGTGGAGCCGTTGACTGTGGCATGGC
ATGCAGTCAATCGGTCTTCTATTCAAAATGATCATGCGCGTACGGCACTG
GTGGTGGGTGCCGGGCCTATTGGGCTTGCTGTACTTCTGGTTCTTAAGGC
CCGCGGCATTGAGTCCGTTGTCGTCGTGGAGGTCTCGTCGCAGCGGAGGG
AACTTGCTAGCTCTTTGGGCGCTACGCGGGTTCTTGACCCCCGGACGGCC
GATGTTGTGGGCACGGTGCGTGCGATGACGGGCAATGCCGGAGCTGATAT
AGCATTTGAATGCTCTGCAGTGCAAGCAGGTTTAGACACCGCTTTGAAGG
GGATTCGAGCACGGGGCACAATGACGATTTTATCTCTCTGGAGTGAGAAG
CCGGCAATCGATGCATTTGACGTGGTACTAGGCGAAAAGCACGTGGTAGG
GTCGGTGATATATGAAGACGGAGAATTTGAGGCCGTCATCGAAGCTATGT
GGTCAGGCAAACTCAACCCTCGGGCCTTAATCACCAGTAAAATCCGCATG
GAGGACATCGTAGAAAAAGGCTTCAAAACGTTAATCCACGGCCGAGACAA
CCAAATCAAGATCTTGGTGGACATTTCTGCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27970ATCC64974_27970Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27970-T1.exon1ATCC64974_27970-T1.exon1Aspergillus niger N402exon
ATCC64974_27970-T1.exon2ATCC64974_27970-T1.exon2Aspergillus niger N402exon
ATCC64974_27970-T1.exon3ATCC64974_27970-T1.exon3Aspergillus niger N402exon
ATCC64974_27970-T1.exon4ATCC64974_27970-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27970-T1.cdsATCC64974_27970-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27970-T1ATCC64974_27970-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR020843
DBxrefPFAM:PF16912
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:447718..448943 +
Powered by Drupal