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ATCC64974_28120-T1, ATCC64974_28120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28120-T1
Unique NameATCC64974_28120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:496671..497690-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28120-T1 ID=ATCC64974_28120-T1|Name=ATCC64974_28120-T1|organism=Aspergillus niger N402|type=mRNA|length=1020bp|location=Sequence derived from alignment at OGUI01000004.1:496671..497690- (Aspergillus niger N402)
ATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCTCTTCAC
GAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGGACATGG
TCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAACATCTAC
TTCAGTCAACGTAAGATAACATAGTATATATCCTAAATCGGTGAGCATCC
GAGCTCACCAGACCAACAGAACTCATCAAATTGGGGAAACGGATGTCTAC
TCGACAACAAGCACTTGCGACAGCGCAAGTCTATGTCAAGAGGTTCTACA
CCAAGAACGAGATTAGACATACAAACCCGTATCTTGTCGTCACAACTGCC
TTCTATCTGGCCTGTAAAATGGAAGAATGCCCTCAACATATTCGTTTTGT
CGTCGGAGAGGCTAGAGGTCTCTGGCCAGGTACGGAACACTCGCGTTAAT
GCACTTCGTGCGCTTCCCGCTGACGTGGCTACAGAGTTTATTGCCCCAGA
TGTTTCAAAACTAGGAGAATGCGAATTCTCTTTGATATCGGAAATGAACT
CTCAGCTTATTGTGCACCACCCATATCGAACTTTATCAGAACTCCAACCC
GAGCTGTCACTTACGTCAGATGAAGTTGCTCTTGCATGGTCTGTAATCAA
CGACCACTATCTCACCGACTTGCCGCTCTTATATCCGCCTCACGTCATCG
CTGTCATGGCGATTATCGTCGCCGTGGTCTTCAAGCCCAGCCAAACGAGC
TTTCACGGGTCAGCAGCGCCACTGGCCAGCGCGATGCGCGATGGGGGGAT
GAACATCCTTGGAGCATTGGGAGATAAGGGCGGCAACGGCCCTCCTCCCC
GCATTCAACGACTTATAGGATGGCTTGCCGAGAGCGAGGTGGACATCAAG
GCAGTCATAGAGTGTACTCAAGAGCTGGTGTCGCTTTACGAGGTCTGGGA
GCAATACAGCGAAAAGCATTGCAAGGAGCTTCTTGGACGGATGGTGAAGA
GCAAGAACCTGGACAAATGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:496671..497690-

>ATCC64974_28120-T1 ID=ATCC64974_28120-T1|Name=ATCC64974_28120-T1|organism=Aspergillus niger N402|type=CDS|length=2718bp|location=Sequence derived from alignment at OGUI01000004.1:496671..497690- (Aspergillus niger N402)
AGTTTATTGCCCCAGATGTTTCAAAACTAGGAGAATGCGAATTCTCTTTG
ATATCGGAAATGAACTCTCAGCTTATTGTGCACCACCCATATCGAACTTT
ATCAGAACTCCAACCCGAGCTGTCACTTACGTCAGATGAAGTTGCTCTTG
CATGGTCTGTAATCAACGACCACTATCTCACCGACTTGCCGCTCTTATAT
CCGCCTCACGTCATCGCTGTCATGGCGATTATCGTCGCCGTGGTCTTCAA
GCCCAGCCAAACGAGCTTTCACGGGTCAGCAGCGCCACTGGCCAGCGCGA
TGCGCGATGGGGGGATGAACATCCTTGGAGCATTGGGAGATAAGGGCGGC
AACGGCCCTCCTCCCCGCATTCAACGACTTATAGGATGGCTTGCCGAGAG
CGAGGTGGACATCAAGGCAGTCATAGAGTGTACTCAAGAGCTGGTGTCGC
TTTACGAGGTCTGGGAGCAATACAGCGAAAAGCATTGCAAGGAGCTTCTT
GGACGGATGGTGAAGAGCAAGAACCTGGACAAATGAAACTCATCAAATTG
GGGAAACGGATGTCTACTCGACAACAAGCACTTGCGACAGCGCAAGTCTA
TGTCAAGAGGTTCTACACCAAGAACGAGATTAGACATACAAACCCGTATC
TTGTCGTCACAACTGCCTTCTATCTGGCCTGTAAAATGGAAGAATGCCCT
CAACATATTCGTTTTGTCGTCGGAGAGGCTAGAGGTCTCTGGCCAGATGG
CTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCTCTTCACGAGA
GAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGGACATGGTCGC
TCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAACATCTACTTCA
GTCAACAGTTTATTGCCCCAGATGTTTCAAAACTAGGAGAATGCGAATTC
TCTTTGATATCGGAAATGAACTCTCAGCTTATTGTGCACCACCCATATCG
AACTTTATCAGAACTCCAACCCGAGCTGTCACTTACGTCAGATGAAGTTG
CTCTTGCATGGTCTGTAATCAACGACCACTATCTCACCGACTTGCCGCTC
TTATATCCGCCTCACGTCATCGCTGTCATGGCGATTATCGTCGCCGTGGT
CTTCAAGCCCAGCCAAACGAGCTTTCACGGGTCAGCAGCGCCACTGGCCA
GCGCGATGCGCGATGGGGGGATGAACATCCTTGGAGCATTGGGAGATAAG
GGCGGCAACGGCCCTCCTCCCCGCATTCAACGACTTATAGGATGGCTTGC
CGAGAGCGAGGTGGACATCAAGGCAGTCATAGAGTGTACTCAAGAGCTGG
TGTCGCTTTACGAGGTCTGGGAGCAATACAGCGAAAAGCATTGCAAGGAG
CTTCTTGGACGGATGGTGAAGAGCAAGAACCTGGACAAATGAAACTCATC
AAATTGGGGAAACGGATGTCTACTCGACAACAAGCACTTGCGACAGCGCA
AGTCTATGTCAAGAGGTTCTACACCAAGAACGAGATTAGACATACAAACC
CGTATCTTGTCGTCACAACTGCCTTCTATCTGGCCTGTAAAATGGAAGAA
TGCCCTCAACATATTCGTTTTGTCGTCGGAGAGGCTAGAGGTCTCTGGCC
AGATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGGCTCTTC
ACGAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCGGGACAT
GGTCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGAACATCT
ACTTCAGTCAACAGTTTATTGCCCCAGATGTTTCAAAACTAGGAGAATGC
GAATTCTCTTTGATATCGGAAATGAACTCTCAGCTTATTGTGCACCACCC
ATATCGAACTTTATCAGAACTCCAACCCGAGCTGTCACTTACGTCAGATG
AAGTTGCTCTTGCATGGTCTGTAATCAACGACCACTATCTCACCGACTTG
CCGCTCTTATATCCGCCTCACGTCATCGCTGTCATGGCGATTATCGTCGC
CGTGGTCTTCAAGCCCAGCCAAACGAGCTTTCACGGGTCAGCAGCGCCAC
TGGCCAGCGCGATGCGCGATGGGGGGATGAACATCCTTGGAGCATTGGGA
GATAAGGGCGGCAACGGCCCTCCTCCCCGCATTCAACGACTTATAGGATG
GCTTGCCGAGAGCGAGGTGGACATCAAGGCAGTCATAGAGTGTACTCAAG
AGCTGGTGTCGCTTTACGAGGTCTGGGAGCAATACAGCGAAAAGCATTGC
AAGGAGCTTCTTGGACGGATGGTGAAGAGCAAGAACCTGGACAAATGAAA
CTCATCAAATTGGGGAAACGGATGTCTACTCGACAACAAGCACTTGCGAC
AGCGCAAGTCTATGTCAAGAGGTTCTACACCAAGAACGAGATTAGACATA
CAAACCCGTATCTTGTCGTCACAACTGCCTTCTATCTGGCCTGTAAAATG
GAAGAATGCCCTCAACATATTCGTTTTGTCGTCGGAGAGGCTAGAGGTCT
CTGGCCAGATGGCTGCTAATTACTGGGCATCAACTCAACGCCGACACTGG
CTCTTCACGAGAGAGAAGTTGGCAGAGATTCGGGAGAACTTTAGAGAGCG
GGACATGGTCGCTCATAGTCAGTTTCCTCTGCCGGATCAGAGGTTGCTGA
ACATCTACTTCAGTCAAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SSN8ATCC64974_28120Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28120-T1ATCC64974_28120-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28120-T1.cdsATCC64974_28120-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28120-T1.exon3ATCC64974_28120-T1.exon3Aspergillus niger N402exon
ATCC64974_28120-T1.exon2ATCC64974_28120-T1.exon2Aspergillus niger N402exon
ATCC64974_28120-T1.exon1ATCC64974_28120-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09262K8C
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR006671
DBxrefInterPro:IPR013763
DBxrefPFAM:PF00134
ProductRNA polymerase II holoenzyme cyclin-like subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:496671..497690 -
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