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ATCC64974_28310-T1, ATCC64974_28310-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28310-T1
Unique NameATCC64974_28310-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:549737..550906-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28310-T1 ID=ATCC64974_28310-T1|Name=ATCC64974_28310-T1|organism=Aspergillus niger N402|type=mRNA|length=1170bp|location=Sequence derived from alignment at OGUI01000004.1:549737..550906- (Aspergillus niger N402)
ATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCCAA
ACCCCCTCCCTTAAACCCCATATCATATATGTATACATCAAAACGCCACC
TCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCAA
CTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCCA
CTTCCAAAACTGCAACCTCTGCCCGCGTCGCTGCGGCGTCAACCGATACC
ATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACACC
ATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCTC
CGGCAGCGTGTTTTTCTCCGGGTGCAATATGCGGTGTGTGTTTTGTCAGA
ATCATGTGCGTATACACCCCCCCACCCCTGGGTTTAGATAATTGTAGTGG
GTTGACAGTTGTGGACAGGATATAGCGCACAAGAAAGCAGGTCATGATCT
CACGCCCACCGAGCTAGCGGAGTGGTACATGAAACTCCAGACTGTAGGGA
ACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTCGTCCCGCAAGTC
GTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGT
CTATAACACATCCAGCTTCGACTCCCTCGACTCATTACATCTGCTGGATG
GGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGGAAGGGGAGTACC
GCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAG
CATCAAGGAGATGCATCGGCAGGTAGGGGATTTGAGTTTCACGTCTGATG
GAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTGATGCCGGGGTTG
GAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAG
GGATTTGTATGTGCATGTTATGGAGCAGTATAGGCCGGATGCGTATGTGG
GGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAATGGGGAGGTCAGG
TATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAG
GGAGGCTGCGGTGCAGGCGGGGTTGTGGAGGTTTTGTGAGGTTAATGAGA
TGGGGGGGTTTCATCTGTAG
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Coding sequence (CDS) from alignment at OGUI01000004.1:549737..550906-

>ATCC64974_28310-T1 ID=ATCC64974_28310-T1|Name=ATCC64974_28310-T1|organism=Aspergillus niger N402|type=CDS|length=2214bp|location=Sequence derived from alignment at OGUI01000004.1:549737..550906- (Aspergillus niger N402)
GATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGAGCTAGC
GGAGTGGTACATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACC
TCGTCACGCCAGAGCACGTCGTCCCGCAAGTCGTGCTTTCGATTCTAGAC
GCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATCCAGCTT
CGACTCCCTCGACTCATTACATCTGCTGGATGGGTTGGTGGATATATACC
TCCCTGACTTTAAAGTCTGGAAGGGGAGTACCGCGAAGCGATTACTCAAA
GCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATGCATCG
GCAGGTAGGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAG
TGTTGTTGAGACATTTGGTGATGCCGGGGTTGGAGGATGAGGGGAGGGAG
ATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTGCATGT
TATGGAGCAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGA
GGAGTGGAGAGGAGGAGAATGGGGAGGTCAGGTATAAGGAGATTAATCGC
GCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTGCAGGC
GGGGTTGTGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGT
AGATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCC
AAACCCCCTCCCTTAAACCCCATATCATATATGTATACATCAAAACGCCA
CCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACC
AACTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCC
CACTTCCAAAACTGCAACCTCTGCCCGCGTCGCTGCGGCGTCAACCGATA
CCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACA
CCATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGC
TCCGGCAGCGTGTTTTTCTCCGGGTGCAATATGCGGTGTGTGTTTTGTCA
GAATCATGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCG
AGCTAGCGGAGTGGTACATGAAACTCCAGACTGTAGGGAACGTGCATAAT
ATTAACCTCGTCACGCCAGAGCACGTCGTCCCGCAAGTCGTGCTTTCGAT
TCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACAT
CCAGCTTCGACTCCCTCGACTCATTACATCTGCTGGATGGGTTGGTGGAT
ATATACCTCCCTGACTTTAAAGTCTGGAAGGGGAGTACCGCGAAGCGATT
ACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGA
TGCATCGGCAGGTAGGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAG
AAGGGAGTGTTGTTGAGACATTTGGTGATGCCGGGGTTGGAGGATGAGGG
GAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATG
TGCATGTTATGGAGCAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAG
AGAGGGAGGAGTGGAGAGGAGGAGAATGGGGAGGTCAGGTATAAGGAGAT
TAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGG
TGCAGGCGGGGTTGTGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTT
CATCTGTAGATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCT
CCGCTCCAAACCCCCTCCCTTAAACCCCATATCATATATGTATACATCAA
AACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCG
CGCTACCAACTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGC
CTACGCCCACTTCCAAAACTGCAACCTCTGCCCGCGTCGCTGCGGCGTCA
ACCGATACCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAA
GTGAACACCATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTT
TCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGCAATATGCGGTGTGTGT
TTTGTCAGAATCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_28310ATCC64974_28310Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28310-T1ATCC64974_28310-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28310-T1.cdsATCC64974_28310-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28310-T1.exon2ATCC64974_28310-T1.exon2Aspergillus niger N402exon
ATCC64974_28310-T1.exon1ATCC64974_28310-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR040085
DBxrefInterPro:IPR016431
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR013785
DBxrefPFAM:PF04055
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:549737..550906 -
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