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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:560801..561913- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_28340-T1 ID=ATCC64974_28340-T1|Name=ATCC64974_28340-T1|organism=Aspergillus niger N402|type=mRNA|length=1113bp|location=Sequence derived from alignment at OGUI01000004.1:560801..561913- (Aspergillus niger N402)
ATGGACCCCTCCGACGACCCCGTCATCGCCTCCTACGACATCTGCCTCAC
CGACTCAGAAATCTCCCGCTACGTCCTGCAATACCTCGACCGACCCGCCG
GCTCCTCCTACGACGACCGCCACGGCCAAAAACCCACCTCCTTCCGCCTG
AAACCCAAGACGGGTCTTGTGGAAGTCGACGTTCCCATCAACACGCGGGT
AAATTACGATGTCAGCAAGGGATTGCGCTACGGTGATGCATTGAAGAAGA
GTCGGAGTGCGCGCGAAGGCGGCGCGTTCGGTATGGCGGGTGGGTTTAGT
TCCGGTGGTGCTGGCGGTGGAGCGCCGGCGAAGGTGAAGATGGAGGAAGC
GGCGGATGCGAAGAGCGAGACGGCGTCGTTGATGAGGGTGCAAACTCTGG
GAGGGCGGATCAAGAGTCCCGAGGATGGGGATCCGGTTTACATGTTGGCG
GCTTTTAGGGGGGGTGAGTTTTTCCCTTCCCTTCTCTTTGTTGGTTGTTG
GAGTCGGGGGAAAAGGGCTAATGTGTGTGATTTTGGTGGGAACAGATAAA
TTGCATCTTTCGCCTGTTTCGGCTGTTGTACAACTACACCCGCAACTTCA
TCATTTGGATGCTTTGGATGAGATGCCGACTAAGGGCAAGGGGAAGGCGA
GGAAGGAAGGCGAGGAGGATCGTCCCGGCGAGAGCGAGGCTAGGGCTATT
GATGTAAAGATCAAGGCCGCGGAGGATGGAGAGGCGGCGCAGGTTGCGGG
CAATCTGGATCTTTTGAAGAAGATGCAGGATGAGAAGTGGAAGGATTATG
AGTGGGTTGATGCTGAGGTGAGTGTTATGCTGTTGGATTCCTTAGGCTCA
AGGGAATGTTTTGCTAATGTGTTTGTTTTGTTTCGCAGACTGAGGAATCG
TGGCAATTGTACGAAAACTACATGATGCATCAGGATGTGGATAGTCTTCC
GCAGCTGCAGTCGGCGATTGATAGTGAAAGTTATCTGGATACGATGAGTG
CGCCGCGGATTGATCCTGCACGACCGGAGATGACGGGTTGGGCTATGAAA
CAGAACCGGATGAAGCAGCGGGAAGAACAGCAGTCTGCTCAGGGGACAAC
GGAGCAAGGGTGA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:560801..561913- >ATCC64974_28340-T1 ID=ATCC64974_28340-T1|Name=ATCC64974_28340-T1|organism=Aspergillus niger N402|type=CDS|length=2880bp|location=Sequence derived from alignment at OGUI01000004.1:560801..561913- (Aspergillus niger N402)
ACTGAGGAATCGTGGCAATTGTACGAAAACTACATGATGCATCAGGATGT
GGATAGTCTTCCGCAGCTGCAGTCGGCGATTGATAGTGAAAGTTATCTGG
ATACGATGAGTGCGCCGCGGATTGATCCTGCACGACCGGAGATGACGGGT
TGGGCTATGAAACAGAACCGGATGAAGCAGCGGGAAGAACAGCAGTCTGC
TCAGGGGACAACGGAGCAAGGGTGAATAAATTGCATCTTTCGCCTGTTTC
GGCTGTTGTACAACTACACCCGCAACTTCATCATTTGGATGCTTTGGATG
AGATGCCGACTAAGGGCAAGGGGAAGGCGAGGAAGGAAGGCGAGGAGGAT
CGTCCCGGCGAGAGCGAGGCTAGGGCTATTGATGTAAAGATCAAGGCCGC
GGAGGATGGAGAGGCGGCGCAGGTTGCGGGCAATCTGGATCTTTTGAAGA
AGATGCAGGATGAGAAGTGGAAGGATTATGAGTGGGTTGATGCTGAGATG
GACCCCTCCGACGACCCCGTCATCGCCTCCTACGACATCTGCCTCACCGA
CTCAGAAATCTCCCGCTACGTCCTGCAATACCTCGACCGACCCGCCGGCT
CCTCCTACGACGACCGCCACGGCCAAAAACCCACCTCCTTCCGCCTGAAA
CCCAAGACGGGTCTTGTGGAAGTCGACGTTCCCATCAACACGCGGGTAAA
TTACGATGTCAGCAAGGGATTGCGCTACGGTGATGCATTGAAGAAGAGTC
GGAGTGCGCGCGAAGGCGGCGCGTTCGGTATGGCGGGTGGGTTTAGTTCC
GGTGGTGCTGGCGGTGGAGCGCCGGCGAAGGTGAAGATGGAGGAAGCGGC
GGATGCGAAGAGCGAGACGGCGTCGTTGATGAGGGTGCAAACTCTGGGAG
GGCGGATCAAGAGTCCCGAGGATGGGGATCCGGTTTACATGTTGGCGGCT
TTTAGGGGGGACTGAGGAATCGTGGCAATTGTACGAAAACTACATGATGC
ATCAGGATGTGGATAGTCTTCCGCAGCTGCAGTCGGCGATTGATAGTGAA
AGTTATCTGGATACGATGAGTGCGCCGCGGATTGATCCTGCACGACCGGA
GATGACGGGTTGGGCTATGAAACAGAACCGGATGAAGCAGCGGGAAGAAC
AGCAGTCTGCTCAGGGGACAACGGAGCAAGGGTGAATAAATTGCATCTTT
CGCCTGTTTCGGCTGTTGTACAACTACACCCGCAACTTCATCATTTGGAT
GCTTTGGATGAGATGCCGACTAAGGGCAAGGGGAAGGCGAGGAAGGAAGG
CGAGGAGGATCGTCCCGGCGAGAGCGAGGCTAGGGCTATTGATGTAAAGA
TCAAGGCCGCGGAGGATGGAGAGGCGGCGCAGGTTGCGGGCAATCTGGAT
CTTTTGAAGAAGATGCAGGATGAGAAGTGGAAGGATTATGAGTGGGTTGA
TGCTGAGATGGACCCCTCCGACGACCCCGTCATCGCCTCCTACGACATCT
GCCTCACCGACTCAGAAATCTCCCGCTACGTCCTGCAATACCTCGACCGA
CCCGCCGGCTCCTCCTACGACGACCGCCACGGCCAAAAACCCACCTCCTT
CCGCCTGAAACCCAAGACGGGTCTTGTGGAAGTCGACGTTCCCATCAACA
CGCGGGTAAATTACGATGTCAGCAAGGGATTGCGCTACGGTGATGCATTG
AAGAAGAGTCGGAGTGCGCGCGAAGGCGGCGCGTTCGGTATGGCGGGTGG
GTTTAGTTCCGGTGGTGCTGGCGGTGGAGCGCCGGCGAAGGTGAAGATGG
AGGAAGCGGCGGATGCGAAGAGCGAGACGGCGTCGTTGATGAGGGTGCAA
ACTCTGGGAGGGCGGATCAAGAGTCCCGAGGATGGGGATCCGGTTTACAT
GTTGGCGGCTTTTAGGGGGGACTGAGGAATCGTGGCAATTGTACGAAAAC
TACATGATGCATCAGGATGTGGATAGTCTTCCGCAGCTGCAGTCGGCGAT
TGATAGTGAAAGTTATCTGGATACGATGAGTGCGCCGCGGATTGATCCTG
CACGACCGGAGATGACGGGTTGGGCTATGAAACAGAACCGGATGAAGCAG
CGGGAAGAACAGCAGTCTGCTCAGGGGACAACGGAGCAAGGGTGAATAAA
TTGCATCTTTCGCCTGTTTCGGCTGTTGTACAACTACACCCGCAACTTCA
TCATTTGGATGCTTTGGATGAGATGCCGACTAAGGGCAAGGGGAAGGCGA
GGAAGGAAGGCGAGGAGGATCGTCCCGGCGAGAGCGAGGCTAGGGCTATT
GATGTAAAGATCAAGGCCGCGGAGGATGGAGAGGCGGCGCAGGTTGCGGG
CAATCTGGATCTTTTGAAGAAGATGCAGGATGAGAAGTGGAAGGATTATG
AGTGGGTTGATGCTGAGATGGACCCCTCCGACGACCCCGTCATCGCCTCC
TACGACATCTGCCTCACCGACTCAGAAATCTCCCGCTACGTCCTGCAATA
CCTCGACCGACCCGCCGGCTCCTCCTACGACGACCGCCACGGCCAAAAAC
CCACCTCCTTCCGCCTGAAACCCAAGACGGGTCTTGTGGAAGTCGACGTT
CCCATCAACACGCGGGTAAATTACGATGTCAGCAAGGGATTGCGCTACGG
TGATGCATTGAAGAAGAGTCGGAGTGCGCGCGAAGGCGGCGCGTTCGGTA
TGGCGGGTGGGTTTAGTTCCGGTGGTGCTGGCGGTGGAGCGCCGGCGAAG
GTGAAGATGGAGGAAGCGGCGGATGCGAAGAGCGAGACGGCGTCGTTGAT
GAGGGTGCAAACTCTGGGAGGGCGGATCAAGAGTCCCGAGGATGGGGATC
CGGTTTACATGTTGGCGGCTTTTAGGGGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_28340-T1 | ATCC64974_28340-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006886 |
| DBxref | PFAM:PF04801 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:560801..561913 - |
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