You are here

Home

ATCC64974_28900-T1, ATCC64974_28900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28900-T1
Unique NameATCC64974_28900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:721250..722914+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28900-T1 ID=ATCC64974_28900-T1|Name=ATCC64974_28900-T1|organism=Aspergillus niger N402|type=mRNA|length=1665bp|location=Sequence derived from alignment at OGUI01000004.1:721250..722914+ (Aspergillus niger N402)
ATGGAAGCTGCAGCGCATTCACTGCCCTCGAGTCAGGAATCAGACTTCGC
TGTGAATAATCATCTCCCTCATCGCGAAGAGTCCGATGAGAAAGGACATG
ACGCCGACGCCAGTGCCACCGATGATGATGTCCGCAAGATTACCGGTTTC
CGATGGTTTCTGATTTGCGCTGCTCTGTATCTCTCTGCTCTGATGTATGG
ACTTGATACAACCATCGCTGCGGATGTGCAGGGCGCCGTGATTGAGAGAT
TCGGGGACGTGTCGCAACTTGCATGGATTGGAGCCGGTTTCCCACTCGGT
TCAGTTGCCGTGATTCTCCCCTACGGGTTTCTCTATACCGTCATGAATAT
GAAGTGGCTCTACATTGCTGGAATCGTGTTATTCCAAGGTGGTTCTGCTC
TCTGTGGTGGTGCTCCAAATATGAACGCCCTTATTGTCGGCCGTGTGATT
GCAGGCGCTGGAGGTACAGGAATCTATCTCGGTGGACTTAACCATTTCTC
TGCCATGACCACCCGCAACGAGCGCGGCACCTATCTTACAGGAACCGGAT
TTGTCTGGGGCGTGGGTGCCATCCTGGGTCCCGTCGTGGGAGGCGGATTC
TCCGACTCCTCCGCCACCTGGCGCTGGGGTTTTTACCTGAACCTGGTAAT
CGGCGCCATCACAGCCCCCGTGTACCTCTTCTACCTCCCCGCCATTCACC
CCGGCGCGGGCCAATCTCTTCGCAAACGCTTAACGCGACTCGACTATCTG
GGATTCGTCCTCAGCGCGGCAATGTGGGTGACCTTCGCACTTGGCTTCAT
CTCTGCAGGAGGCATCTGGGCGTGGGACTCCGGCGCCACCATCGCGCTAA
TCGTGCTCTTCGGCGTCCTATTCATCCTTTACGCCCTCCAACAATACTTA
TGCATCTTCACTACGCCCCAAACGCGCTCCTTCCCCGGCCATCTCCTCCG
CTCCCGCACCCAAATCCTCCTCTACATCACAACGACCTGCGCCAACACCG
CCATGTTCTTCACGACCTTCTACATCCCAATCTACTTCCAGTTCACGCGC
AACGACTCCTCCCTAATGGCTGCCGTGCGCCTTCTCCCCTACCTCCTCGT
AACGATCACCATCAACCTCGCCATCGGCTGGCTCCTCCCAAAAGCCAAAT
ATTACATGCCGCTGTGCCTCATCTCAGGCATCCTCCTCACCCTCGCCAGC
GCCCTCTTTGTCGGATACCTCTCACCCTCTACCCCGGCAGGACAGATCTA
CGGTTTCACGATCCTCATGGCTGTCGGCACCGGCATGACCATGCAGCTGG
GGTATGCGGTAGCTAGTCTCAAGGTGCCTCCCGAGGATATCTTCAGCGCG
ATCAATTTGCAGAATGTGGCGCAGATTGGAGCTACAGTTATCTGTCTTGT
GGTGGCAAGTCAGGTGTTTCAGTCTACTGCAGTAAAGAATCTGAAAGGGG
TGTTGGATGGGAGGGGATATAGTGAGGCGGAGATACGGAATGCTGTAGCG
GGTGTGCAGAGTACGTTGTTGAAGAGCTTGAGTGGGGAGTTGAGGGATCG
GGCTATCAAGGCTATTACGGATGCGATGGCCAGGGCGTTTATTATTCCGT
TGGTGGCCGGAGCGGTGGGGGTGGTGAGTTCGCTGGGGATGAGGAGGGAG
AGGTTGTTTGGGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:721250..722914+

>ATCC64974_28900-T1 ID=ATCC64974_28900-T1|Name=ATCC64974_28900-T1|organism=Aspergillus niger N402|type=CDS|length=1665bp|location=Sequence derived from alignment at OGUI01000004.1:721250..722914+ (Aspergillus niger N402)
ATGGAAGCTGCAGCGCATTCACTGCCCTCGAGTCAGGAATCAGACTTCGC
TGTGAATAATCATCTCCCTCATCGCGAAGAGTCCGATGAGAAAGGACATG
ACGCCGACGCCAGTGCCACCGATGATGATGTCCGCAAGATTACCGGTTTC
CGATGGTTTCTGATTTGCGCTGCTCTGTATCTCTCTGCTCTGATGTATGG
ACTTGATACAACCATCGCTGCGGATGTGCAGGGCGCCGTGATTGAGAGAT
TCGGGGACGTGTCGCAACTTGCATGGATTGGAGCCGGTTTCCCACTCGGT
TCAGTTGCCGTGATTCTCCCCTACGGGTTTCTCTATACCGTCATGAATAT
GAAGTGGCTCTACATTGCTGGAATCGTGTTATTCCAAGGTGGTTCTGCTC
TCTGTGGTGGTGCTCCAAATATGAACGCCCTTATTGTCGGCCGTGTGATT
GCAGGCGCTGGAGGTACAGGAATCTATCTCGGTGGACTTAACCATTTCTC
TGCCATGACCACCCGCAACGAGCGCGGCACCTATCTTACAGGAACCGGAT
TTGTCTGGGGCGTGGGTGCCATCCTGGGTCCCGTCGTGGGAGGCGGATTC
TCCGACTCCTCCGCCACCTGGCGCTGGGGTTTTTACCTGAACCTGGTAAT
CGGCGCCATCACAGCCCCCGTGTACCTCTTCTACCTCCCCGCCATTCACC
CCGGCGCGGGCCAATCTCTTCGCAAACGCTTAACGCGACTCGACTATCTG
GGATTCGTCCTCAGCGCGGCAATGTGGGTGACCTTCGCACTTGGCTTCAT
CTCTGCAGGAGGCATCTGGGCGTGGGACTCCGGCGCCACCATCGCGCTAA
TCGTGCTCTTCGGCGTCCTATTCATCCTTTACGCCCTCCAACAATACTTA
TGCATCTTCACTACGCCCCAAACGCGCTCCTTCCCCGGCCATCTCCTCCG
CTCCCGCACCCAAATCCTCCTCTACATCACAACGACCTGCGCCAACACCG
CCATGTTCTTCACGACCTTCTACATCCCAATCTACTTCCAGTTCACGCGC
AACGACTCCTCCCTAATGGCTGCCGTGCGCCTTCTCCCCTACCTCCTCGT
AACGATCACCATCAACCTCGCCATCGGCTGGCTCCTCCCAAAAGCCAAAT
ATTACATGCCGCTGTGCCTCATCTCAGGCATCCTCCTCACCCTCGCCAGC
GCCCTCTTTGTCGGATACCTCTCACCCTCTACCCCGGCAGGACAGATCTA
CGGTTTCACGATCCTCATGGCTGTCGGCACCGGCATGACCATGCAGCTGG
GGTATGCGGTAGCTAGTCTCAAGGTGCCTCCCGAGGATATCTTCAGCGCG
ATCAATTTGCAGAATGTGGCGCAGATTGGAGCTACAGTTATCTGTCTTGT
GGTGGCAAGTCAGGTGTTTCAGTCTACTGCAGTAAAGAATCTGAAAGGGG
TGTTGGATGGGAGGGGATATAGTGAGGCGGAGATACGGAATGCTGTAGCG
GGTGTGCAGAGTACGTTGTTGAAGAGCTTGAGTGGGGAGTTGAGGGATCG
GGCTATCAAGGCTATTACGGATGCGATGGCCAGGGCGTTTATTATTCCGT
TGGTGGCCGGAGCGGTGGGGGTGGTGAGTTCGCTGGGGATGAGGAGGGAG
AGGTTGTTTGGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_28900ATCC64974_28900Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28900-T1.exon1ATCC64974_28900-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28900-T1.cdsATCC64974_28900-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28900-T1ATCC64974_28900-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000041.2
NoteEggNog:ENOG41
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:721250..722914 +
Powered by Drupal