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ATCC64974_29090-T1, ATCC64974_29090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_29090-T1
Unique NameATCC64974_29090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:785410..787452+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_29090-T1 ID=ATCC64974_29090-T1|Name=ATCC64974_29090-T1|organism=Aspergillus niger N402|type=mRNA|length=2043bp|location=Sequence derived from alignment at OGUI01000004.1:785410..787452+ (Aspergillus niger N402)
ATGCCCACCGCCTCATCGCCGGCATCAGGGCACTCGCCCTCGGTGTCCAA
GCGACGTAAAATCCGCAAGGGCACCTTCTCCTGTTGGGAGTGCAAGCATC
GGAAGCGACGTTGCGTGTTCGAGCCCCTCAAGGACTCCACTTGTGTCTAT
TGCCAGTCTCGAGGTATACCCTGCGTCAGCCAGGAACATGCCGATCCACG
AAGCCGCAGTAGCGATGGCCAGATATCGGAGCGGATTTGCCACGTCGAAT
CTCTAGTCAACCAATTGATTCGGCAGCGTGACAGCTGTCAGCCTCAGGTC
CAGCCTGTGATCGGGGTTCGCGACCGAGCGAGTTCCCCTCGGCCGAGAGA
AGCATCTATATCATTCCCCTTTCAGCAGATGTGCAGGTCTCTGGCGGCGT
TATTCCCTCATCCGAACACGACCGCACTCATCTTGACCAAGGGTCGCTTC
TTCAGTCTGCCTTTCGAGACTTGTCGATCCCCACTCCGAGACCAATCGGC
TGTCTGCTCTGGCCTAGAACAGTCTGGAGATGTCTTCAGGCTACCATATT
CTACTTCCCATCCAATCCAATTTGCTCAGAAACTCATACAACTTGCACTC
GGTTTACAGCAGCTGGACCTCGCCTCATGTCTACACCCACAACTGCAGCT
AGAGCAAAAGTGGTCCACAGGCGACTCTGCCCGGCGCTACGTCGATCTGG
CAGTTAGTCATGTAACATCACAGGACGCGCTCGTAGATTCTCTTGATGGT
CTTGACACTCTCTTACTGCAGGCCCGCTATCACCTTAACTCTGGGGAGCT
GCGCTCGGCCTGGCTTATTTTCCGTCGTGCTTTGAGCATCGCTCAACTGA
TCGGACTTCCAAGCCGGAATGAACAAGCCGGCAGCCGCGCGGAATCCCTT
TGGGTTCAGCTTGTGTATAATGATCGGTTCTTGTCACTAATGCTTGGGCT
TCCATGCGCGGTGAAGGATCTCGAGCTCCTGAATTGGCAGGCTTTAGATA
CCTACCCACCTCTTAGAAAATTATACCGCATCCATTCTGTCATCGCAGCT
CGGATAATTGTCCGAAATGTGCGTCTGCAGCATTGCAATTTGTTGTCTCA
AAGACAGTTGGATACCACGTATGATCATTACGGCGTGACTCGCGGCATAA
ATGATGAACTAAGGAAGAGTGCCCGATCAGTGCCTATTGATTGCTGGAAG
GTCCCTACCTTGAACAATACTATGTCGGATACGGATAAGATGGACAGGAT
CTCCATGCTTGTTACCCAGATGCACCAATATTATCTCGTGATCCTTCTTC
ATCAACCGTACTTGTTACTGCAGCTGAGCAACCATACATATTTCAGTCCA
TCAGCAATCTCACCTATACTACCCGACTACTCATACAGCAGACATGTGGT
CGTCCCTGCAAGCCGTGAAGTACTGAGTCGCTGTCTCGAGTTCCGGAATA
TACGGCCTATTCTCTCTTACCGAGGGCTTGAACATAAAGCCTTCGTCGCA
GCAGTGGCCCTGCTCTTGTCTCATATATTGGGACACCGGTCGGGCTCCGA
GAACGTCCTAGAACATCAACGGCCTCAAGACCTGGCCATGATTCAACAGG
CAATTGACACCTTGGACGAACTCTGCACGTCCAATGACCCAAATAGAGAC
TCTGCGATCCAAACAAGAAATTTGTTGAGCAAACTCCTGAGTATTGAGGC
TGAGGCAGCCGACGGTATCATTTACATTTCATGCATTGAAAAGGACAGTG
TTGGTTCAGATGATGCCCTGTGCGGTACTTCCCACCAAGGCCTGAAGTTT
TCCATTCCGTACTTTGGAGTTATCTGCGTTATTCCTGGGCCAGTTCCAAA
TCTGCAAAATGATGGCCTACTCGCAGGGTCCGCACAGGCAACAGGACCAC
ATGGCCTTCTCCCTTCGACATTTACACAACTGGAGCTTGATTGTGGCTTG
AATTCTCAGCTCGCTCTATCGTCTAATCTTCAAGCCGAGATGCAGTTGCT
TTATGACTGGTCACTTGAACCGAACGTCCTCAACGAAGGCTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:785410..787452+

>ATCC64974_29090-T1 ID=ATCC64974_29090-T1|Name=ATCC64974_29090-T1|organism=Aspergillus niger N402|type=CDS|length=2043bp|location=Sequence derived from alignment at OGUI01000004.1:785410..787452+ (Aspergillus niger N402)
ATGCCCACCGCCTCATCGCCGGCATCAGGGCACTCGCCCTCGGTGTCCAA
GCGACGTAAAATCCGCAAGGGCACCTTCTCCTGTTGGGAGTGCAAGCATC
GGAAGCGACGTTGCGTGTTCGAGCCCCTCAAGGACTCCACTTGTGTCTAT
TGCCAGTCTCGAGGTATACCCTGCGTCAGCCAGGAACATGCCGATCCACG
AAGCCGCAGTAGCGATGGCCAGATATCGGAGCGGATTTGCCACGTCGAAT
CTCTAGTCAACCAATTGATTCGGCAGCGTGACAGCTGTCAGCCTCAGGTC
CAGCCTGTGATCGGGGTTCGCGACCGAGCGAGTTCCCCTCGGCCGAGAGA
AGCATCTATATCATTCCCCTTTCAGCAGATGTGCAGGTCTCTGGCGGCGT
TATTCCCTCATCCGAACACGACCGCACTCATCTTGACCAAGGGTCGCTTC
TTCAGTCTGCCTTTCGAGACTTGTCGATCCCCACTCCGAGACCAATCGGC
TGTCTGCTCTGGCCTAGAACAGTCTGGAGATGTCTTCAGGCTACCATATT
CTACTTCCCATCCAATCCAATTTGCTCAGAAACTCATACAACTTGCACTC
GGTTTACAGCAGCTGGACCTCGCCTCATGTCTACACCCACAACTGCAGCT
AGAGCAAAAGTGGTCCACAGGCGACTCTGCCCGGCGCTACGTCGATCTGG
CAGTTAGTCATGTAACATCACAGGACGCGCTCGTAGATTCTCTTGATGGT
CTTGACACTCTCTTACTGCAGGCCCGCTATCACCTTAACTCTGGGGAGCT
GCGCTCGGCCTGGCTTATTTTCCGTCGTGCTTTGAGCATCGCTCAACTGA
TCGGACTTCCAAGCCGGAATGAACAAGCCGGCAGCCGCGCGGAATCCCTT
TGGGTTCAGCTTGTGTATAATGATCGGTTCTTGTCACTAATGCTTGGGCT
TCCATGCGCGGTGAAGGATCTCGAGCTCCTGAATTGGCAGGCTTTAGATA
CCTACCCACCTCTTAGAAAATTATACCGCATCCATTCTGTCATCGCAGCT
CGGATAATTGTCCGAAATGTGCGTCTGCAGCATTGCAATTTGTTGTCTCA
AAGACAGTTGGATACCACGTATGATCATTACGGCGTGACTCGCGGCATAA
ATGATGAACTAAGGAAGAGTGCCCGATCAGTGCCTATTGATTGCTGGAAG
GTCCCTACCTTGAACAATACTATGTCGGATACGGATAAGATGGACAGGAT
CTCCATGCTTGTTACCCAGATGCACCAATATTATCTCGTGATCCTTCTTC
ATCAACCGTACTTGTTACTGCAGCTGAGCAACCATACATATTTCAGTCCA
TCAGCAATCTCACCTATACTACCCGACTACTCATACAGCAGACATGTGGT
CGTCCCTGCAAGCCGTGAAGTACTGAGTCGCTGTCTCGAGTTCCGGAATA
TACGGCCTATTCTCTCTTACCGAGGGCTTGAACATAAAGCCTTCGTCGCA
GCAGTGGCCCTGCTCTTGTCTCATATATTGGGACACCGGTCGGGCTCCGA
GAACGTCCTAGAACATCAACGGCCTCAAGACCTGGCCATGATTCAACAGG
CAATTGACACCTTGGACGAACTCTGCACGTCCAATGACCCAAATAGAGAC
TCTGCGATCCAAACAAGAAATTTGTTGAGCAAACTCCTGAGTATTGAGGC
TGAGGCAGCCGACGGTATCATTTACATTTCATGCATTGAAAAGGACAGTG
TTGGTTCAGATGATGCCCTGTGCGGTACTTCCCACCAAGGCCTGAAGTTT
TCCATTCCGTACTTTGGAGTTATCTGCGTTATTCCTGGGCCAGTTCCAAA
TCTGCAAAATGATGGCCTACTCGCAGGGTCCGCACAGGCAACAGGACCAC
ATGGCCTTCTCCCTTCGACATTTACACAACTGGAGCTTGATTGTGGCTTG
AATTCTCAGCTCGCTCTATCGTCTAATCTTCAAGCCGAGATGCAGTTGCT
TTATGACTGGTCACTTGAACCGAACGTCCTCAACGAAGGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_29090ATCC64974_29090Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29090-T1.exon1ATCC64974_29090-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29090-T1.cdsATCC64974_29090-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29090-T1ATCC64974_29090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:785410..787452 +
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