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ATCC64974_29310-T1, ATCC64974_29310-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_29310-T1
Unique NameATCC64974_29310-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:836826..837982-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_29310-T1 ID=ATCC64974_29310-T1|Name=ATCC64974_29310-T1|organism=Aspergillus niger N402|type=mRNA|length=1157bp|location=Sequence derived from alignment at OGUI01000004.1:836826..837982- (Aspergillus niger N402)
ATGAAGTATCTCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTAC
GGCTTCCGCCCATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTT
CTGCGGATTGGCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAG
CCGACCAAGTACACCAGCACCTTTGACAATCTGACACCCAATGATAACGA
CTTCCGCTGTAACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCG
CTGAGGTCGCCGCGGGCGATACCATCGGGATGAAGCTCTTCTACGACACC
AGTATTGCGCATCCTGGTCCGGGTCAAGTTTGTATGAGTCACCCCCTCAC
CCCCTGTCATGGTAACTCATCTTCTAATCATCCTACTCTCCCGAACCGCA
GATATGTCCAAGGCACCCACCGGCAATGTCCAGGAATACGAAGGCGACGG
GGAATGGTTCAAAATCTGGGAAAAGACTCTTTGCAACGAGAATGCCGACT
TGACCAAGGACGCCTGGTGCACCTGGGGCATGTCTCAATTCGAGTTCCAA
ATCCCTGCTGAGACCCCGGCGGGCGAGTACCTGGTGCGCGCCGAGCATGT
GGGCTTGCACGGCGCTCAGGCCAACGAGGCTGAATTCTTCTACAGGTGAG
ACAACCGCTCCCAGATTTATGACATTCAAGGAGCAACAGTATTGATACCA
AGATTCTAGCTGTGCGCAAGTCAAGGTCACAGGCTCGGGAACTGGATCTC
CGAGTCTGACGTACAAAATCCCTGGTCTCTACAACGACAACATGACCCTG
TTCAACGGCCTCAATCTGTGGGTCGACTCAGCCGAGAAGATAGAGACGGA
TATCCTGGAGACGCCAATTGGTGATGATGTGTGGAGTGGACATGGCTCGG
AAAGCTCGTCTGCTGCCTCCCCTTCGGTCAGCAGTGCATCTGTCGCAAGC
CCGGGTACAACTACCGCTGTTGCGCACGCCCATGTTCAGACCCCTGCCAG
CAGCAGCACTTCTTCGACGGCCGCTAGCTCGGGCAATCTTGTTTCGCACT
GGGGTCAATGCGGAGGCCTCAATTATGCCGGCCCAACCGAGTGTGAGTCG
CCTTGCACCTGTGTGGAGCAGAACCCTTGGTACCATCAATGCGTGACTTC
GTCTTGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:836826..837982-

>ATCC64974_29310-T1 ID=ATCC64974_29310-T1|Name=ATCC64974_29310-T1|organism=Aspergillus niger N402|type=CDS|length=3069bp|location=Sequence derived from alignment at OGUI01000004.1:836826..837982- (Aspergillus niger N402)
CTGTGCGCAAGTCAAGGTCACAGGCTCGGGAACTGGATCTCCGAGTCTGA
CGTACAAAATCCCTGGTCTCTACAACGACAACATGACCCTGTTCAACGGC
CTCAATCTGTGGGTCGACTCAGCCGAGAAGATAGAGACGGATATCCTGGA
GACGCCAATTGGTGATGATGTGTGGAGTGGACATGGCTCGGAAAGCTCGT
CTGCTGCCTCCCCTTCGGTCAGCAGTGCATCTGTCGCAAGCCCGGGTACA
ACTACCGCTGTTGCGCACGCCCATGTTCAGACCCCTGCCAGCAGCAGCAC
TTCTTCGACGGCCGCTAGCTCGGGCAATCTTGTTTCGCACTGGGGTCAAT
GCGGAGGCCTCAATTATGCCGGCCCAACCGAGTGTGAGTCGCCTTGCACC
TGTGTGGAGCAGAACCCTTGGTACCATCAATGCGTGACTTCGTCTTGAAT
ATGTCCAAGGCACCCACCGGCAATGTCCAGGAATACGAAGGCGACGGGGA
ATGGTTCAAAATCTGGGAAAAGACTCTTTGCAACGAGAATGCCGACTTGA
CCAAGGACGCCTGGTGCACCTGGGGCATGTCTCAATTCGAGTTCCAAATC
CCTGCTGAGACCCCGGCGGGCGAGTACCTGGTGCGCGCCGAGCATGTGGG
CTTGCACGGCGCTCAGGCCAACGAGGCTGAATTCTTCTACAGATGAAGTA
TCTCCCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTACGGCTTCCG
CCCATTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTTCTGCGGAT
TGGCAGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAGCCGACCAA
GTACACCAGCACCTTTGACAATCTGACACCCAATGATAACGACTTCCGCT
GTAACCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCGCTGAGGTC
GCCGCGGGCGATACCATCGGGATGAAGCTCTTCTACGACACCAGTATTGC
GCATCCTGGTCCGGGTCAAGTTTCTGTGCGCAAGTCAAGGTCACAGGCTC
GGGAACTGGATCTCCGAGTCTGACGTACAAAATCCCTGGTCTCTACAACG
ACAACATGACCCTGTTCAACGGCCTCAATCTGTGGGTCGACTCAGCCGAG
AAGATAGAGACGGATATCCTGGAGACGCCAATTGGTGATGATGTGTGGAG
TGGACATGGCTCGGAAAGCTCGTCTGCTGCCTCCCCTTCGGTCAGCAGTG
CATCTGTCGCAAGCCCGGGTACAACTACCGCTGTTGCGCACGCCCATGTT
CAGACCCCTGCCAGCAGCAGCACTTCTTCGACGGCCGCTAGCTCGGGCAA
TCTTGTTTCGCACTGGGGTCAATGCGGAGGCCTCAATTATGCCGGCCCAA
CCGAGTGTGAGTCGCCTTGCACCTGTGTGGAGCAGAACCCTTGGTACCAT
CAATGCGTGACTTCGTCTTGAATATGTCCAAGGCACCCACCGGCAATGTC
CAGGAATACGAAGGCGACGGGGAATGGTTCAAAATCTGGGAAAAGACTCT
TTGCAACGAGAATGCCGACTTGACCAAGGACGCCTGGTGCACCTGGGGCA
TGTCTCAATTCGAGTTCCAAATCCCTGCTGAGACCCCGGCGGGCGAGTAC
CTGGTGCGCGCCGAGCATGTGGGCTTGCACGGCGCTCAGGCCAACGAGGC
TGAATTCTTCTACAGATGAAGTATCTCCCTCTCGTCGTTGCAGCCACTGC
CAGCCTGGCACCTACGGCTTCCGCCCATTATATCTTCAGCAAGCTCGTGC
TGAACGGAGAGGCTTCTGCGGATTGGCAGTACATTCGTGAGACTACTCGC
AGTGTAGTCTACGAGCCGACCAAGTACACCAGCACCTTTGACAATCTGAC
ACCCAATGATAACGACTTCCGCTGTAACCTGGGCTCGTTCAGCAATGCTG
CCAAGACTGAGGTCGCTGAGGTCGCCGCGGGCGATACCATCGGGATGAAG
CTCTTCTACGACACCAGTATTGCGCATCCTGGTCCGGGTCAAGTTTCTGT
GCGCAAGTCAAGGTCACAGGCTCGGGAACTGGATCTCCGAGTCTGACGTA
CAAAATCCCTGGTCTCTACAACGACAACATGACCCTGTTCAACGGCCTCA
ATCTGTGGGTCGACTCAGCCGAGAAGATAGAGACGGATATCCTGGAGACG
CCAATTGGTGATGATGTGTGGAGTGGACATGGCTCGGAAAGCTCGTCTGC
TGCCTCCCCTTCGGTCAGCAGTGCATCTGTCGCAAGCCCGGGTACAACTA
CCGCTGTTGCGCACGCCCATGTTCAGACCCCTGCCAGCAGCAGCACTTCT
TCGACGGCCGCTAGCTCGGGCAATCTTGTTTCGCACTGGGGTCAATGCGG
AGGCCTCAATTATGCCGGCCCAACCGAGTGTGAGTCGCCTTGCACCTGTG
TGGAGCAGAACCCTTGGTACCATCAATGCGTGACTTCGTCTTGAATATGT
CCAAGGCACCCACCGGCAATGTCCAGGAATACGAAGGCGACGGGGAATGG
TTCAAAATCTGGGAAAAGACTCTTTGCAACGAGAATGCCGACTTGACCAA
GGACGCCTGGTGCACCTGGGGCATGTCTCAATTCGAGTTCCAAATCCCTG
CTGAGACCCCGGCGGGCGAGTACCTGGTGCGCGCCGAGCATGTGGGCTTG
CACGGCGCTCAGGCCAACGAGGCTGAATTCTTCTACAGATGAAGTATCTC
CCTCTCGTCGTTGCAGCCACTGCCAGCCTGGCACCTACGGCTTCCGCCCA
TTATATCTTCAGCAAGCTCGTGCTGAACGGAGAGGCTTCTGCGGATTGGC
AGTACATTCGTGAGACTACTCGCAGTGTAGTCTACGAGCCGACCAAGTAC
ACCAGCACCTTTGACAATCTGACACCCAATGATAACGACTTCCGCTGTAA
CCTGGGCTCGTTCAGCAATGCTGCCAAGACTGAGGTCGCTGAGGTCGCCG
CGGGCGATACCATCGGGATGAAGCTCTTCTACGACACCAGTATTGCGCAT
CCTGGTCCGGGTCAAGTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_29310ATCC64974_29310Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29310-T1ATCC64974_29310-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29310-T1.cdsATCC64974_29310-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29310-T1.exon3ATCC64974_29310-T1.exon3Aspergillus niger N402exon
ATCC64974_29310-T1.exon2ATCC64974_29310-T1.exon2Aspergillus niger N402exon
ATCC64974_29310-T1.exon1ATCC64974_29310-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:836826..837982 -
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