You are here

Home

ATCC64974_29580-T1, ATCC64974_29580-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_29580-T1
Unique NameATCC64974_29580-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:912525..913569-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_29580-T1 ID=ATCC64974_29580-T1|Name=ATCC64974_29580-T1|organism=Aspergillus niger N402|type=mRNA|length=1045bp|location=Sequence derived from alignment at OGUI01000004.1:912525..913569- (Aspergillus niger N402)
ATGACTTCAGCAGTTCCACCAAAGAGCAAACCGCTGCCTCCGGGCATATA
TTGCCCAGTAATCTCTCTGTTCAAAGGGACACCGCGGCAGGAGATCGACT
ACGATGCTTCATACAAGTTCTTCACTCATCTCATCCGGAGTGGGATCCAC
GGAATCGTCCTCGCTGGCACAAATGCCGAGGCGGTTCTGCTTTCACCAAC
TGAGCGACAGGAGTTGGTGAGAACTGCTCGACGGGCGGCTGTGGATTTGG
GATTTGATGATTATCCTGTGGTGGCGGGAATTAGTGGGCAATCAACGAAC
GAGTCTCTTCGCCTCGCCGAAGACGCTCGTGAGGCAGGAGCAGACTTTGG
GCTACTTCTGCCGCCCAGCTACTGGCCTAAAGCAGTCACGAAAGACGTCA
TTCTGGACTTTTACACTGAGGTTGCAGACAGCAACCTTCTCCCAATCGTC
ATCTACAGCGTAAGCCCTCTTTCCACATATGATGCATGCATGAACTTTGG
CTGAATTAAGACCATAGTTTCCTGCTGTCTGCAATGGCGTGGACATGAAC
TCGGATGTCATGTCAGCCTTGGCTCAGCATCCCAACATTGTCGGGGTCAA
ATTGACATGTGGTAATGCTGGCAAGGTTACTCGGTTAACTCAGGAATATA
CACATGAACAATTTGGGGTATATGCTGGCTCATCTGACTGGCTCATCCCT
TGTCTCAGCGGGGGCGGATCAGGTTGCGTGACAGGAATTGCCAATGTTTT
CCCAAAGTCAACCGCCAAGTTATTCTCTCTGTGGAAGGCTGGGCAGATTG
AAGAAGCGCGAAAGTTACAGGGTCTGATATCACAGGCCGAAAAGGCCTGC
AAGGAAGGAATTGCGCCTACCAAATTTGCCGCGGCACACTTTGCCGGACC
CGTCGCAGGAGTGACGGACCAAGCAGCATTCCTCCCTCGAAAGCCGTATA
AAGCGTCATCACCGGCAACGCAGGAATGGGTAATCGGTGTGATGAAGCAT
CTTGTGGATATTGAGAATTCTTTGCCAGATGTGCGAGCGGAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:912525..913569-

>ATCC64974_29580-T1 ID=ATCC64974_29580-T1|Name=ATCC64974_29580-T1|organism=Aspergillus niger N402|type=CDS|length=1974bp|location=Sequence derived from alignment at OGUI01000004.1:912525..913569- (Aspergillus niger N402)
TTTCCTGCTGTCTGCAATGGCGTGGACATGAACTCGGATGTCATGTCAGC
CTTGGCTCAGCATCCCAACATTGTCGGGGTCAAATTGACATGTGGTAATG
CTGGCAAGGTTACTCGGTTAACTCAGGAATATACACATGAACAATTTGGG
GTATATGCTGGCTCATCTGACTGGCTCATCCCTTGTCTCAGCGGGGGCGG
ATCAGGTTGCGTGACAGGAATTGCCAATGTTTTCCCAAAGTCAACCGCCA
AGTTATTCTCTCTGTGGAAGGCTGGGCAGATTGAAGAAGCGCGAAAGTTA
CAGGGTCTGATATCACAGGCCGAAAAGGCCTGCAAGGAAGGAATTGCGCC
TACCAAATTTGCCGCGGCACACTTTGCCGGACCCGTCGCAGGAGTGACGG
ACCAAGCAGCATTCCTCCCTCGAAAGCCGTATAAAGCGTCATCACCGGCA
ACGCAGGAATGGGTAATCGGTGTGATGAAGCATCTTGTGGATATTGAGAA
TTCTTTGCCAGATGTGCGAGCGGAGTGAATGACTTCAGCAGTTCCACCAA
AGAGCAAACCGCTGCCTCCGGGCATATATTGCCCAGTAATCTCTCTGTTC
AAAGGGACACCGCGGCAGGAGATCGACTACGATGCTTCATACAAGTTCTT
CACTCATCTCATCCGGAGTGGGATCCACGGAATCGTCCTCGCTGGCACAA
ATGCCGAGGCGGTTCTGCTTTCACCAACTGAGCGACAGGAGTTGGTGAGA
ACTGCTCGACGGGCGGCTGTGGATTTGGGATTTGATGATTATCCTGTGGT
GGCGGGAATTAGTGGGCAATCAACGAACGAGTCTCTTCGCCTCGCCGAAG
ACGCTCGTGAGGCAGGAGCAGACTTTGGGCTACTTCTGCCGCCCAGCTAC
TGGCCTAAAGCAGTCACGAAAGACGTCATTCTGGACTTTTACACTGAGGT
TGCAGACAGCAACCTTCTCCCAATCGTCATCTACAGCTTTCCTGCTGTCT
GCAATGGCGTGGACATGAACTCGGATGTCATGTCAGCCTTGGCTCAGCAT
CCCAACATTGTCGGGGTCAAATTGACATGTGGTAATGCTGGCAAGGTTAC
TCGGTTAACTCAGGAATATACACATGAACAATTTGGGGTATATGCTGGCT
CATCTGACTGGCTCATCCCTTGTCTCAGCGGGGGCGGATCAGGTTGCGTG
ACAGGAATTGCCAATGTTTTCCCAAAGTCAACCGCCAAGTTATTCTCTCT
GTGGAAGGCTGGGCAGATTGAAGAAGCGCGAAAGTTACAGGGTCTGATAT
CACAGGCCGAAAAGGCCTGCAAGGAAGGAATTGCGCCTACCAAATTTGCC
GCGGCACACTTTGCCGGACCCGTCGCAGGAGTGACGGACCAAGCAGCATT
CCTCCCTCGAAAGCCGTATAAAGCGTCATCACCGGCAACGCAGGAATGGG
TAATCGGTGTGATGAAGCATCTTGTGGATATTGAGAATTCTTTGCCAGAT
GTGCGAGCGGAGTGAATGACTTCAGCAGTTCCACCAAAGAGCAAACCGCT
GCCTCCGGGCATATATTGCCCAGTAATCTCTCTGTTCAAAGGGACACCGC
GGCAGGAGATCGACTACGATGCTTCATACAAGTTCTTCACTCATCTCATC
CGGAGTGGGATCCACGGAATCGTCCTCGCTGGCACAAATGCCGAGGCGGT
TCTGCTTTCACCAACTGAGCGACAGGAGTTGGTGAGAACTGCTCGACGGG
CGGCTGTGGATTTGGGATTTGATGATTATCCTGTGGTGGCGGGAATTAGT
GGGCAATCAACGAACGAGTCTCTTCGCCTCGCCGAAGACGCTCGTGAGGC
AGGAGCAGACTTTGGGCTACTTCTGCCGCCCAGCTACTGGCCTAAAGCAG
TCACGAAAGACGTCATTCTGGACTTTTACACTGAGGTTGCAGACAGCAAC
CTTCTCCCAATCGTCATCTACAGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_29580ATCC64974_29580Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29580-T1ATCC64974_29580-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29580-T1.cdsATCC64974_29580-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_29580-T1.exon2ATCC64974_29580-T1.exon2Aspergillus niger N402exon
ATCC64974_29580-T1.exon1ATCC64974_29580-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000041.3
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR002220
DBxrefPFAM:PF00701
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:912525..913569 -
Powered by Drupal