You are here

Home

ATCC64974_30020-T1, ATCC64974_30020-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_30020-T1
Unique NameATCC64974_30020-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1045766..1046812+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_30020-T1 ID=ATCC64974_30020-T1|Name=ATCC64974_30020-T1|organism=Aspergillus niger N402|type=mRNA|length=1047bp|location=Sequence derived from alignment at OGUI01000004.1:1045766..1046812+ (Aspergillus niger N402)
ATGTGGACCCATCTACCATCCCTCTGTGCCCTAGGCCTCACGCTAATCAC
ATGTGTGATAACCTCACCCATTGAAATCCGAGCCACCGGACCCTGGCTAG
CCCTCGACACGGACTTCCCAGACCCCGGCTTCGTCCAAGCCGACGACGGC
ACCTGGTACGCCTTCGGGACGAACGGCAACAACCGCACGGTGCAAGTAGC
CAAGTCCGCAGACTTCAAAACATGGACCCTCCTCGACAAAGAAGCCCTCC
CCACTTTAGCAGGCTGGGAGACCCAAATTGACCACTGGGCCCCAGACGTA
GTCCGCCGTGTACATTCCCCATCCCATCCCGTCCCATCCCCTTCCCCCAA
ATACAAAACTAACCACCACCACCACCCCCAGAACGACGGCAAATACGTCC
TCTACTACAGCGGCGAAGCACAACAAATGCTCCGCCACCACTGCATCGGC
ACCGCAGTCTCAGAATCCACCGATCCCAGCGGGCCCTACATCCCAAACCC
GACGCCCCTCTCCTGTCGACTCGACCAAGGCGGCAGCATCGACGCGTCCG
GCTTCCTAGACAAAGACGGCTCACGCTACGTCGTGTTCAAAGTGGACGGC
AACAGCATCGGCAACGGCGGGGACTGCAACAACGGCATTGCGCCATTGAA
ACCCACCCCGGTTCTTCTTCAAAAGGTAGATACGGACGGGTTTACCCCCG
TCGGCGACGCGGTGCAGATCCTGGACCGCGATGATAGCGACGGGCCTTTG
GTAGAGGCCCCGAATTTGATCCTCCATGGGGACACGTACTTTTTGTTTTA
CTCGACGCATTGCTATACGGATGAGAAGTATGATGTGCGGTGGGCGACGG
CGAGTGAGATTACGGGTCCGTATACGAAGACGGGGAGGCAGTTGGTGAAA
TCTGGGGATTATGGGCTTGTTTCGCCGGGGGGTGGGACGGTTTGTGGGTG
TGGGGATCGCATGCTGTTTCATGGGTTTTGTGGTGATAATAGGTGTATGT
ATGCGGCTGAGGTGAGGATTACGGGGACGGAGGTGGAGTTTGTTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:1045766..1046812+

>ATCC64974_30020-T1 ID=ATCC64974_30020-T1|Name=ATCC64974_30020-T1|organism=Aspergillus niger N402|type=CDS|length=1047bp|location=Sequence derived from alignment at OGUI01000004.1:1045766..1046812+ (Aspergillus niger N402)
ATGTGGACCCATCTACCATCCCTCTGTGCCCTAGGCCTCACGCTAATCAC
ATGTGTGATAACCTCACCCATTGAAATCCGAGCCACCGGACCCTGGCTAG
CCCTCGACACGGACTTCCCAGACCCCGGCTTCGTCCAAGCCGACGACGGC
ACCTGGTACGCCTTCGGGACGAACGGCAACAACCGCACGGTGCAAGTAGC
CAAGTCCGCAGACTTCAAAACATGGACCCTCCTCGACAAAGAAGCCCTCC
CCACTTTAGCAGGCTGGGAGACCCAAATTGACCACTGGGCCCCAGACGTA
GTCCGCCGTGTACATTCCCCATCCCATCCCGTCCCATCCCCTTCCCCCAA
ATACAAAACTAACCACCACCACCACCCCCAGAACGACGGCAAATACGTCC
TCTACTACAGCGGCGAAGCACAACAAATGCTCCGCCACCACTGCATCGGC
ACCGCAGTCTCAGAATCCACCGATCCCAGCGGGCCCTACATCCCAAACCC
GACGCCCCTCTCCTGTCGACTCGACCAAGGCGGCAGCATCGACGCGTCCG
GCTTCCTAGACAAAGACGGCTCACGCTACGTCGTGTTCAAAGTGGACGGC
AACAGCATCGGCAACGGCGGGGACTGCAACAACGGCATTGCGCCATTGAA
ACCCACCCCGGTTCTTCTTCAAAAGGTAGATACGGACGGGTTTACCCCCG
TCGGCGACGCGGTGCAGATCCTGGACCGCGATGATAGCGACGGGCCTTTG
GTAGAGGCCCCGAATTTGATCCTCCATGGGGACACGTACTTTTTGTTTTA
CTCGACGCATTGCTATACGGATGAGAAGTATGATGTGCGGTGGGCGACGG
CGAGTGAGATTACGGGTCCGTATACGAAGACGGGGAGGCAGTTGGTGAAA
TCTGGGGATTATGGGCTTGTTTCGCCGGGGGGTGGGACGGTTTGTGGGTG
TGGGGATCGCATGCTGTTTCATGGGTTTTGTGGTGATAATAGGTGTATGT
ATGCGGCTGAGGTGAGGATTACGGGGACGGAGGTGGAGTTTGTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_30020ATCC64974_30020Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30020-T1.exon1ATCC64974_30020-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30020-T1.cdsATCC64974_30020-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30020-T1ATCC64974_30020-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH43_31
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_30
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR006710
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1045766..1046812 +
Powered by Drupal