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ATCC64974_30130-T1, ATCC64974_30130-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_30130-T1
Unique NameATCC64974_30130-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1082887..1084368-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_30130-T1 ID=ATCC64974_30130-T1|Name=ATCC64974_30130-T1|organism=Aspergillus niger N402|type=mRNA|length=1482bp|location=Sequence derived from alignment at OGUI01000004.1:1082887..1084368- (Aspergillus niger N402)
ATGTCGGACACACCCCGTCCATCGCTCAAGCTCACCTTCGGGAAAAAGAA
GGCGCCCGAGGAACCATCTCAGAGACAGCCTGCTGCACCTCCTCCGCCAA
CAGAGACCCCCCAACGCAAGCTCACGCTCAAGATCGCCCGTAGGCCGGCA
CCAGAAGCGCCTCCTGAGGATGACAAACTTAAGAAAAAGAAGAAGACTTC
GAAGAAGCGTCCAGCAGAGGGACCCGCGTTGCAGGAACCTTCCACCACGG
TCGCGACAACCCAACCCTCTGGGCCTAAACGCCTGAAATTAAACCCATCG
AAGAAGCCCGGGGTCCAGTCGCTTCGTATCAAGAACAAGGGGCTGGTCCC
CAACCGGCCGGTGGGCGTTGGCTACGACTCGGAGGCGTCCGACACGGAAA
TCGACCCCTCGATCGAGGAACAATTCATTCTGCGCATGTTGCCCGGGGAG
GATTGCGAATATCTGCAGCGCGCCATTTCTGAACGCCGGTTCGATCGCTC
GGAAATTTCTTTTAAGCCACTCACCCGTGAGGGACGACGCGCCATCTTCA
AGATCCGCGATCATCAATACGCCGCAGCGCTGGTCGACTTGCCATGTATC
ATCGAAGGTATGAAGAGTTGGGACCGGCGTGGGTGGTACAAATCTGCGGA
TATCTGCCAGATGCTTCTGGTCCTTGGCCCGGTTGCTAATGAACAAGAGG
CCATGGACTACCCGCTTCCCTCGGACATTTTACACCCAGATGACAAAACT
TTGCAATACCCACACGGTCTCACGCCGCCGTTGCGATGGGTCAGGAAGCG
GCGTTTCCGGGAACGGATCAGCACGCGGACTATCGAGCAGGTCGAGAAGG
CCGTCGAAGATCTGATTGCCCAGGATGAGGCTGCCGTGGCACCTATCCGC
TATGAGCTGGTTGATAAGACAGCATTGAACCGGGCTGAGGGACTGGTCCA
AAGTGGAGATTACGACTATGAAGATGAATACGATGATGAACAGGATGCCG
AGGGCGAGATGGAGGAAGGCATGGAAGATGGTGGTCTGTTTGACGATTTC
GAAGACACCCTCGCTGCCGAGATGGAGGCTGCCTTGGCTGCCGGCGACGA
AGGCGAGCCAGGCGCTGCGGCCGCGGCAACTGGAGCTGAGCCACCATCAG
ATGCTGGAGTATACCAAGCGGGTACGCCAATGGCAACGAAGCCGTCCACG
CCTGCGCCAGAATCGTCTGGTGATGAGAGTGACGGGTCCGACGATGGCGA
TGAACCGGAAGACGAGCTGGACGATGAGCAACTCGAGCAACAGCGGCAGA
TGCAGCAGCAACGCGAGGAAATTGCCGAACTGGAGGCACTGATCCGCGCC
GAGACCGCGAAGTGGGAGAAGATGCAGAACGCCATCCTGAAGGGCAAACT
GGCCAAGCGGATCCACGATCTGAAACAGGATCTATCATTGAAGAAGGTGT
CTATCGGCGAGGGCGATGATGCTGATGGTTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1082887..1084368-

>ATCC64974_30130-T1 ID=ATCC64974_30130-T1|Name=ATCC64974_30130-T1|organism=Aspergillus niger N402|type=CDS|length=1482bp|location=Sequence derived from alignment at OGUI01000004.1:1082887..1084368- (Aspergillus niger N402)
ATGTCGGACACACCCCGTCCATCGCTCAAGCTCACCTTCGGGAAAAAGAA
GGCGCCCGAGGAACCATCTCAGAGACAGCCTGCTGCACCTCCTCCGCCAA
CAGAGACCCCCCAACGCAAGCTCACGCTCAAGATCGCCCGTAGGCCGGCA
CCAGAAGCGCCTCCTGAGGATGACAAACTTAAGAAAAAGAAGAAGACTTC
GAAGAAGCGTCCAGCAGAGGGACCCGCGTTGCAGGAACCTTCCACCACGG
TCGCGACAACCCAACCCTCTGGGCCTAAACGCCTGAAATTAAACCCATCG
AAGAAGCCCGGGGTCCAGTCGCTTCGTATCAAGAACAAGGGGCTGGTCCC
CAACCGGCCGGTGGGCGTTGGCTACGACTCGGAGGCGTCCGACACGGAAA
TCGACCCCTCGATCGAGGAACAATTCATTCTGCGCATGTTGCCCGGGGAG
GATTGCGAATATCTGCAGCGCGCCATTTCTGAACGCCGGTTCGATCGCTC
GGAAATTTCTTTTAAGCCACTCACCCGTGAGGGACGACGCGCCATCTTCA
AGATCCGCGATCATCAATACGCCGCAGCGCTGGTCGACTTGCCATGTATC
ATCGAAGGTATGAAGAGTTGGGACCGGCGTGGGTGGTACAAATCTGCGGA
TATCTGCCAGATGCTTCTGGTCCTTGGCCCGGTTGCTAATGAACAAGAGG
CCATGGACTACCCGCTTCCCTCGGACATTTTACACCCAGATGACAAAACT
TTGCAATACCCACACGGTCTCACGCCGCCGTTGCGATGGGTCAGGAAGCG
GCGTTTCCGGGAACGGATCAGCACGCGGACTATCGAGCAGGTCGAGAAGG
CCGTCGAAGATCTGATTGCCCAGGATGAGGCTGCCGTGGCACCTATCCGC
TATGAGCTGGTTGATAAGACAGCATTGAACCGGGCTGAGGGACTGGTCCA
AAGTGGAGATTACGACTATGAAGATGAATACGATGATGAACAGGATGCCG
AGGGCGAGATGGAGGAAGGCATGGAAGATGGTGGTCTGTTTGACGATTTC
GAAGACACCCTCGCTGCCGAGATGGAGGCTGCCTTGGCTGCCGGCGACGA
AGGCGAGCCAGGCGCTGCGGCCGCGGCAACTGGAGCTGAGCCACCATCAG
ATGCTGGAGTATACCAAGCGGGTACGCCAATGGCAACGAAGCCGTCCACG
CCTGCGCCAGAATCGTCTGGTGATGAGAGTGACGGGTCCGACGATGGCGA
TGAACCGGAAGACGAGCTGGACGATGAGCAACTCGAGCAACAGCGGCAGA
TGCAGCAGCAACGCGAGGAAATTGCCGAACTGGAGGCACTGATCCGCGCC
GAGACCGCGAAGTGGGAGAAGATGCAGAACGCCATCCTGAAGGGCAAACT
GGCCAAGCGGATCCACGATCTGAAACAGGATCTATCATTGAAGAAGGTGT
CTATCGGCGAGGGCGATGATGCTGATGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005669transcription factor TFIID complex
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_30130ATCC64974_30130Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30130-T1.cdsATCC64974_30130-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30130-T1.exon1ATCC64974_30130-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_30130-T1ATCC64974_30130-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263U08
DBxrefInterPro:IPR006751
DBxrefPFAM:PF04658
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1082887..1084368 -
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