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ATCC64974_32100-T1, ATCC64974_32100-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32100-T1
Unique NameATCC64974_32100-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1697129..1698709+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32100-T1 ID=ATCC64974_32100-T1|Name=ATCC64974_32100-T1|organism=Aspergillus niger N402|type=mRNA|length=1581bp|location=Sequence derived from alignment at OGUI01000004.1:1697129..1698709+ (Aspergillus niger N402)
ATGGCCTTCGGAAAGCTCTACGGTCTCCCTGTATGTGTTTCTGCATGTGT
TCAGGAAGCTGTTCTTCCCCTTCACAGGGTTTAGATTAGCTTCCTATTGC
TGTCGCTGAGAACACCTGGCTAATAGACTCCATAGGAGAACGGTCGCACC
ATTGCCTGCCTCGTCGCGGCTAAGGCCAACGACGTTGAGCTTGAGCTGGT
CAAGACTGAGCCCAACTCTGGTGCCTCTTTCAACCAGTCTGCTGAGTACA
CCAAGATCAGCCCCCTCGGCAAGATCCCCGCCTTCGAGGGTGCCAACGGC
TACACTCTGTCTGAGGTCATTGCCATCGCTGTCTACGGTACGTTCTCCCT
GAATACGCCCTGCGCGTTGCAATCTCGTTTGCTTGTTTTATGATGAGTAT
TTTATTTCAAGTTATCCCTGTCAGAACTGGTAATAATAAAAATAATGTTG
ATAACGTTTGACTCTGAAAAAAACCATCTCTTTACCCCACTTTGGGGGTG
AAGAGATTTCGTTTTGATTATTTGATGATCACGCAATTGTCATTTGGTTG
GACAACTCATGCTGACTCGAATAAAAGTGACCTCCCAGAACGAGAAGACC
ACCCTCTTGGGTAAGACCAAGCAGGACTACGCTTCCATCCTTCGTTGGTT
GTCCTTCGCCAACTCCGAGCTCCTCCCCCGCTTCGGTGCCTGGTTCCGCC
CTCTGTTGGGTCTTGACGGCTACAACAAGAAGAACGTCGAGGATGCTTCC
AAGGCTGCTCTGAAGAACGCTGGCGTTCTCAACACCTACCTCACTGCCAA
CACCTTCCTTGTTGGCGAGCGCATCTCCCTGGCTGATTACTTCACTGCCG
CTCTCCTCACCCGTGCCTTCGCTACCGTCCTGGACAAGAAGTTCCGTGAC
GAGAACGTTGCCATCACCCGCTGGTACAAGACCATCGTCAACCAGCCCGC
CTTCAAGGCTGTCTTCGAGAACCCCGTCTTCGTCGAGGAGTGCATCAAGT
ACACTCCCCCCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCTGCCCCCGCT
GCCGCTGCCCCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAAGCCCAAGCA
CCCCCTTGAGGCTCTTGGCCGCTCCGAGTTCGTCCTTGACGAGTGGAAGC
GCCAGTACTCCAACGAGGACACCCGCCCCGTTGCTCTGCCCTGGTTCTGG
CAGAACTACAAGCCCGAGGAGTACTCCCTCTGGTCCGTTAACTACAAGTA
CAACAACGAGCTGAAGCTTACCTTCATGGCCAACAACCTGATCGGTGGTT
TCCACGCCCGTCTTGAGGCTTCCCGCAAGTACCTCTTCGGTGCCCAGGCC
GTCTACGGTGCCAACTACGACTGTGTCATCCAGGGTGTCTTCCTGGTCCG
CGGCCAGGACTCCCAGCCCGCTTTCGAGGTCGGCCCCGACTGGGAGAGCT
ACGAGTTCCGCAAGCTCGACCACACCAACCCCGAGGACCGCAAGCTCATC
GAGGACCAGTGGGCTTGGGATGTCCCCGTCGTCATTGACGGCAAGGAGTA
CCCCTTCGCTGACGGCCACGTCTTCAAATAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1697129..1698709+

>ATCC64974_32100-T1 ID=ATCC64974_32100-T1|Name=ATCC64974_32100-T1|organism=Aspergillus niger N402|type=CDS|length=3708bp|location=Sequence derived from alignment at OGUI01000004.1:1697129..1698709+ (Aspergillus niger N402)
ATGGCCTTCGGAAAGCTCTACGGTCTCCCTGAGAACGGTCGCACCATTGC
CTGCCTCGTCGCGGCTAAGGCCAACGACGTTGAGCTTGAGCTGGTCAAGA
CTGAGCCCAACTCTGGTGCCTCTTTCAACCAGTCTGCTGAGTACACCAAG
ATCAGCCCCCTCGGCAAGATCCCCGCCTTCGAGGGTGCCAACGGCTACAC
TCTGTCTGAGGTCATTGCCATCGCTGTCTACGTGACCTCCCAGAACGAGA
AGACCACCCTCTTGGGTAAGACCAAGCAGGACTACGCTTCCATCCTTCGT
TGGTTGTCCTTCGCCAACTCCGAGCTCCTCCCCCGCTTCGGTGCCTGGTT
CCGCCCTCTGTTGGGTCTTGACGGCTACAACAAGAAGAACGTCGAGGATG
CTTCCAAGGCTGCTCTGAAGAACGCTGGCGTTCTCAACACCTACCTCACT
GCCAACACCTTCCTTGTTGGCGAGCGCATCTCCCTGGCTGATTACTTCAC
TGCCGCTCTCCTCACCCGTGCCTTCGCTACCGTCCTGGACAAGAAGTTCC
GTGACGAGAACGTTGCCATCACCCGCTGGTACAAGACCATCGTCAACCAG
CCCGCCTTCAAGGCTGTCTTCGAGAACCCCGTCTTCGTCGAGGAGTGCAT
CAAGTACACTCCCCCCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCTGCCC
CCGCTGCCGCTGCCCCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAAGCCC
AAGCACCCCCTTGAGGCTCTTGGCCGCTCCGAGTTCGTCCTTGACGAGTG
GAAGCGCCAGTACTCCAACGAGGACACCCGCCCCGTTGCTCTGCCCTGGT
TCTGGCAGAACTACAAGCCCGAGGAGTACTCCCTCTGGTCCGTTAACTAC
AAGTACAACAACGAGCTGAAGCTTACCTTCATGGCCAACAACCTGATCGG
TGGTTTCCACGCCCGTCTTGAGGCTTCCCGCAAGTACCTCTTCGGTGCCC
AGGCCGTCTACGGTGCCAACTACGACTGTGTCATCCAGGGTGTCTTCCTG
GTCCGCGGCCAGGACTCCCAGCCCGCTTTCGAGGTCGGCCCCGACTGGGA
GAGCTACGAGTTCCGCAAGCTCGACCACACCAACCCCGAGGACCGCAAGC
TCATCGAGGACCAGTGGGCTTGGGATGTCCCCGTCGTCATTGACGGCAAG
GAGTACCCCTTCGCTGACGGCCACGTCTTCAAATAAATGGCCTTCGGAAA
GCTCTACGGTCTCCCTGAGAACGGTCGCACCATTGCCTGCCTCGTCGCGG
CTAAGGCCAACGACGTTGAGCTTGAGCTGGTCAAGACTGAGCCCAACTCT
GGTGCCTCTTTCAACCAGTCTGCTGAGTACACCAAGATCAGCCCCCTCGG
CAAGATCCCCGCCTTCGAGGGTGCCAACGGCTACACTCTGTCTGAGGTCA
TTGCCATCGCTGTCTACGTGACCTCCCAGAACGAGAAGACCACCCTCTTG
GGTAAGACCAAGCAGGACTACGCTTCCATCCTTCGTTGGTTGTCCTTCGC
CAACTCCGAGCTCCTCCCCCGCTTCGGTGCCTGGTTCCGCCCTCTGTTGG
GTCTTGACGGCTACAACAAGAAGAACGTCGAGGATGCTTCCAAGGCTGCT
CTGAAGAACGCTGGCGTTCTCAACACCTACCTCACTGCCAACACCTTCCT
TGTTGGCGAGCGCATCTCCCTGGCTGATTACTTCACTGCCGCTCTCCTCA
CCCGTGCCTTCGCTACCGTCCTGGACAAGAAGTTCCGTGACGAGAACGTT
GCCATCACCCGCTGGTACAAGACCATCGTCAACCAGCCCGCCTTCAAGGC
TGTCTTCGAGAACCCCGTCTTCGTCGAGGAGTGCATCAAGTACACTCCCC
CCAAGAAGGAGGAGAAGCCCAAGAAGGAGGCTGCCCCCGCTGCCGCTGCC
CCCGCTGAGCCCAAGCCCGCTGAGGAGAAGAAGCCCAAGCACCCCCTTGA
GGCTCTTGGCCGCTCCGAGTTCGTCCTTGACGAGTGGAAGCGCCAGTACT
CCAACGAGGACACCCGCCCCGTTGCTCTGCCCTGGTTCTGGCAGAACTAC
AAGCCCGAGGAGTACTCCCTCTGGTCCGTTAACTACAAGTACAACAACGA
GCTGAAGCTTACCTTCATGGCCAACAACCTGATCGGTGGTTTCCACGCCC
GTCTTGAGGCTTCCCGCAAGTACCTCTTCGGTGCCCAGGCCGTCTACGGT
GCCAACTACGACTGTGTCATCCAGGGTGTCTTCCTGGTCCGCGGCCAGGA
CTCCCAGCCCGCTTTCGAGGTCGGCCCCGACTGGGAGAGCTACGAGTTCC
GCAAGCTCGACCACACCAACCCCGAGGACCGCAAGCTCATCGAGGACCAG
TGGGCTTGGGATGTCCCCGTCGTCATTGACGGCAAGGAGTACCCCTTCGC
TGACGGCCACGTCTTCAAATAAATGGCCTTCGGAAAGCTCTACGGTCTCC
CTGAGAACGGTCGCACCATTGCCTGCCTCGTCGCGGCTAAGGCCAACGAC
GTTGAGCTTGAGCTGGTCAAGACTGAGCCCAACTCTGGTGCCTCTTTCAA
CCAGTCTGCTGAGTACACCAAGATCAGCCCCCTCGGCAAGATCCCCGCCT
TCGAGGGTGCCAACGGCTACACTCTGTCTGAGGTCATTGCCATCGCTGTC
TACGTGACCTCCCAGAACGAGAAGACCACCCTCTTGGGTAAGACCAAGCA
GGACTACGCTTCCATCCTTCGTTGGTTGTCCTTCGCCAACTCCGAGCTCC
TCCCCCGCTTCGGTGCCTGGTTCCGCCCTCTGTTGGGTCTTGACGGCTAC
AACAAGAAGAACGTCGAGGATGCTTCCAAGGCTGCTCTGAAGAACGCTGG
CGTTCTCAACACCTACCTCACTGCCAACACCTTCCTTGTTGGCGAGCGCA
TCTCCCTGGCTGATTACTTCACTGCCGCTCTCCTCACCCGTGCCTTCGCT
ACCGTCCTGGACAAGAAGTTCCGTGACGAGAACGTTGCCATCACCCGCTG
GTACAAGACCATCGTCAACCAGCCCGCCTTCAAGGCTGTCTTCGAGAACC
CCGTCTTCGTCGAGGAGTGCATCAAGTACACTCCCCCCAAGAAGGAGGAG
AAGCCCAAGAAGGAGGCTGCCCCCGCTGCCGCTGCCCCCGCTGAGCCCAA
GCCCGCTGAGGAGAAGAAGCCCAAGCACCCCCTTGAGGCTCTTGGCCGCT
CCGAGTTCGTCCTTGACGAGTGGAAGCGCCAGTACTCCAACGAGGACACC
CGCCCCGTTGCTCTGCCCTGGTTCTGGCAGAACTACAAGCCCGAGGAGTA
CTCCCTCTGGTCCGTTAACTACAAGTACAACAACGAGCTGAAGCTTACCT
TCATGGCCAACAACCTGATCGGTGGTTTCCACGCCCGTCTTGAGGCTTCC
CGCAAGTACCTCTTCGGTGCCCAGGCCGTCTACGGTGCCAACTACGACTG
TGTCATCCAGGGTGTCTTCCTGGTCCGCGGCCAGGACTCCCAGCCCGCTT
TCGAGGTCGGCCCCGACTGGGAGAGCTACGAGTTCCGCAAGCTCGACCAC
ACCAACCCCGAGGACCGCAAGCTCATCGAGGACCAGTGGGCTTGGGATGT
CCCCGTCGTCATTGACGGCAAGGAGTACCCCTTCGCTGACGGCCACGTCT
TCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003746translation elongation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32100ATCC64974_32100Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32100-T1.exon1ATCC64974_32100-T1.exon1Aspergillus niger N402exon
ATCC64974_32100-T1.exon2ATCC64974_32100-T1.exon2Aspergillus niger N402exon
ATCC64974_32100-T1.exon3ATCC64974_32100-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32100-T1.cdsATCC64974_32100-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32100-T1ATCC64974_32100-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR036433
DBxrefInterPro:IPR001662
DBxrefPFAM:PF02798
DBxrefPFAM:PF00043
DBxrefPFAM:PF00647
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1697129..1698709 +
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