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ATCC64974_32140-T1, ATCC64974_32140-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32140-T1
Unique NameATCC64974_32140-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1713557..1714206+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32140-T1 ID=ATCC64974_32140-T1|Name=ATCC64974_32140-T1|organism=Aspergillus niger N402|type=mRNA|length=650bp|location=Sequence derived from alignment at OGUI01000004.1:1713557..1714206+ (Aspergillus niger N402)
ATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGC
CTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGA
AGCGCATTGTTGTTGTACGTATACACTACATACACTGTGTGGACATGATT
CACTTCCGGGCGTATGCTAATACCTGCTGGATGGGATAGTTGCCCGGCTC
GTCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGG
GCAATGCGCTGCGGTATGCGATTATGAAGAAGTGCGTACACATACTCTAC
TTTATTACAAACCTCTCTCTTCACTGTTATGTTGGATCTTGCTAACGAGT
TTTCCTTGGGTTCAGCCCCGAAGTCGAATTCTGCGGTTACACCATCCCCC
ATCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATGGTTTGTTC
TTCCCGCCCTCCTACCTTCTTTTCCGTCAGAATTAAGATCACCAGTATTA
ATGAATGAACAAACAGAAACTACCACCGCCGTCGAAGCCCTCGAGAAAGG
TCTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACGA
CTGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTAG
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Coding sequence (CDS) from alignment at OGUI01000004.1:1713557..1714206+

>ATCC64974_32140-T1 ID=ATCC64974_32140-T1|Name=ATCC64974_32140-T1|organism=Aspergillus niger N402|type=CDS|length=1668bp|location=Sequence derived from alignment at OGUI01000004.1:1713557..1714206+ (Aspergillus niger N402)
ATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACGC
CTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAGA
AGCGCATTGTTGTTTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAA
TTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTAT
GAAGAACCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCCG
AGACGAAGATGAACCTTCGTATTCAGACTTATGAAACTACCACCGCCGTC
GAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCGT
GACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCGG
ATCGCATGGAGGCTTAGATGCCTGCCTCCGTCCACTCCGAAGAACAAGAC
CAGTCCATGCTGGACGCCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGT
CCTAGAGCTGGACGAGAAGCGCATTGTTGTTTTGCCCGGCTCGTCCGACA
CCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTCACACTCTGGGCAATGCG
CTGCGGTATGCGATTATGAAGAACCCCGAAGTCGAATTCTGCGGTTACAC
CATCCCCCATCCTTCCGAGACGAAGATGAACCTTCGTATTCAGACTTATG
AAACTACCACCGCCGTCGAAGCCCTCGAGAAAGGTCTCGACACTCTAATG
GACCTCTGTGATGTCGTGACGGACAAGTTCACGACTGCCCGTGATGACTT
TAATGCTGCGCAGGCGGATCGCATGGAGGCTTAGATGCCTGCCTCCGTCC
ACTCCGAAGAACAAGACCAGTCCATGCTGGACGCCTCCGCGCCTCAAGAG
CAAGAGCAGACCGATGTCCTAGAGCTGGACGAGAAGCGCATTGTTGTTTT
GCCCGGCTCGTCCGACACCGCAGCTTCGTTCCAATTCGAGGGAGAGGGTC
ACACTCTGGGCAATGCGCTGCGGTATGCGATTATGAAGAACCCCGAAGTC
GAATTCTGCGGTTACACCATCCCCCATCCTTCCGAGACGAAGATGAACCT
TCGTATTCAGACTTATGAAACTACCACCGCCGTCGAAGCCCTCGAGAAAG
GTCTCGACACTCTAATGGACCTCTGTGATGTCGTGACGGACAAGTTCACG
ACTGCCCGTGATGACTTTAATGCTGCGCAGGCGGATCGCATGGAGGCTTA
GATGCCTGCCTCCGTCCACTCCGAAGAACAAGACCAGTCCATGCTGGACG
CCTCCGCGCCTCAAGAGCAAGAGCAGACCGATGTCCTAGAGCTGGACGAG
AAGCGCATTGTTGTTTTGCCCGGCTCGTCCGACACCGCAGCTTCGTTCCA
ATTCGAGGGAGAGGGTCACACTCTGGGCAATGCGCTGCGGTATGCGATTA
TGAAGAACCCCGAAGTCGAATTCTGCGGTTACACCATCCCCCATCCTTCC
GAGACGAAGATGAACCTTCGTATTCAGACTTATGAAACTACCACCGCCGT
CGAAGCCCTCGAGAAAGGTCTCGACACTCTAATGGACCTCTGTGATGTCG
TGACGGACAAGTTCACGACTGCCCGTGATGACTTTAATGCTGCGCAGGCG
GATCGCATGGAGGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPC19ATCC64974_32140Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32140-T1.exon1ATCC64974_32140-T1.exon1Aspergillus niger N402exon
ATCC64974_32140-T1.exon2ATCC64974_32140-T1.exon2Aspergillus niger N402exon
ATCC64974_32140-T1.exon3ATCC64974_32140-T1.exon3Aspergillus niger N402exon
ATCC64974_32140-T1.exon4ATCC64974_32140-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32140-T1.cdsATCC64974_32140-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32140-T1ATCC64974_32140-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033898
DBxrefInterPro:IPR008193
DBxrefInterPro:IPR009025
DBxrefInterPro:IPR036603
DBxrefPFAM:PF13656
DBxrefPFAM:PF01193
ProductRNA polymerase subunit AC19
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1713557..1714206 +
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