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ATCC64974_32360-T1, ATCC64974_32360-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32360-T1
Unique NameATCC64974_32360-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1768342..1769449-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32360-T1 ID=ATCC64974_32360-T1|Name=ATCC64974_32360-T1|organism=Aspergillus niger N402|type=mRNA|length=1108bp|location=Sequence derived from alignment at OGUI01000004.1:1768342..1769449- (Aspergillus niger N402)
ATGGCGGGCACACCTGACGCCTCGATGGAGGAAATCCTCTGGCGGTCCCC
GCCCCACGTCCAAATGATGGGAGGATATCTCCACTCCAACAACAGTATGA
GATTTGGATCCTATAACAACAGAAGCAGCCAACTAACACTGTTAATGTAT
AAACAGTTCTTTTCTACTTCGCAGAGTCACCATTTTTTGACCCGACGTCG
AATAACGCCTCACTGGCCATCCAAGCGAACTACAATGAAGCTTTCCGGCA
CTTTGTGGAGACGCGCGAGGCCTTCGAGGGCCGCCTGAAGACTATGCAGG
GCTTGGAATTCGTGGTTTCATATGATCCCATTCAGGCAGCAGCACAACCT
GATGGTCGATTTGCACACGAGCCGTCGAACATTTGGGTGATTCGCAAGCA
GAACCGGCGCAAGAGGACCGGCCTGGACGATGAGGTGGCGGTTTTATCAA
CGTACTTTATCGTGGGAGACTGCATCTACATGGCCCCGTCGGTTGCGAGT
GTAGTGGGAAACCGCATCGTACGTCACATCGGATCTTGTTTTGCTTCCAG
TATATCCTATAATGCTGATGCTAACCCCGACTTCTTGCGCAGCTGTCCGC
AGTTACGTCTCTCACCAGCTTGCTAAAGACAGCATCTACACTCCCAACCT
TCACCCCGTCCCATGGCCATACTTACATGCCGCCTGCACTCAAGCAAGCA
GACGCAAGTCAACCTGGCACCCAATCGCAGCAGAGCAAGGAAAACACACC
ACTGCCAGACGCCGATGCAGCTGGCAAAGCCTCACTCGTTGGATCTTCAC
AGATGGTCGGCGCTGGTTCTAGCCTGCAAGACACGCGGACACTCGCAGAG
TCATTCAATCTGCTCCGAAGGTATGGGGATGAGTTCATGGACGAACATCC
GTTGGTGGGAGAGCCCGGATCATTCATCCTATCCCGAGTCAATGACACAG
ACCGAACCTCGGCGGCGAAACCGCCAGCCACTGCCGCGAAGGTTGGAACG
CCGCAGGTCCGGGTTGATACACCGGGAAAGGTATCAGAGAAGGGGGCGAC
GCCATCGGGGTCCGAAGAGAATAAAATGCGGAAGAAGAAAACTAAGGTTG
GCAGTTGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1768342..1769449-

>ATCC64974_32360-T1 ID=ATCC64974_32360-T1|Name=ATCC64974_32360-T1|organism=Aspergillus niger N402|type=CDS|length=2916bp|location=Sequence derived from alignment at OGUI01000004.1:1768342..1769449- (Aspergillus niger N402)
CTGTCCGCAGTTACGTCTCTCACCAGCTTGCTAAAGACAGCATCTACACT
CCCAACCTTCACCCCGTCCCATGGCCATACTTACATGCCGCCTGCACTCA
AGCAAGCAGACGCAAGTCAACCTGGCACCCAATCGCAGCAGAGCAAGGAA
AACACACCACTGCCAGACGCCGATGCAGCTGGCAAAGCCTCACTCGTTGG
ATCTTCACAGATGGTCGGCGCTGGTTCTAGCCTGCAAGACACGCGGACAC
TCGCAGAGTCATTCAATCTGCTCCGAAGGTATGGGGATGAGTTCATGGAC
GAACATCCGTTGGTGGGAGAGCCCGGATCATTCATCCTATCCCGAGTCAA
TGACACAGACCGAACCTCGGCGGCGAAACCGCCAGCCACTGCCGCGAAGG
TTGGAACGCCGCAGGTCCGGGTTGATACACCGGGAAAGGTATCAGAGAAG
GGGGCGACGCCATCGGGGTCCGAAGAGAATAAAATGCGGAAGAAGAAAAC
TAAGGTTGGCAGTTGATTCTTTTCTACTTCGCAGAGTCACCATTTTTTGA
CCCGACGTCGAATAACGCCTCACTGGCCATCCAAGCGAACTACAATGAAG
CTTTCCGGCACTTTGTGGAGACGCGCGAGGCCTTCGAGGGCCGCCTGAAG
ACTATGCAGGGCTTGGAATTCGTGGTTTCATATGATCCCATTCAGGCAGC
AGCACAACCTGATGGTCGATTTGCACACGAGCCGTCGAACATTTGGGTGA
TTCGCAAGCAGAACCGGCGCAAGAGGACCGGCCTGGACGATGAGGTGGCG
GTTTTATCAACGTACTTTATCGTGGGAGACTGCATCTACATGGCCCCGTC
GGTTGCGAGTGTAGTGGGAAACCGCATCATGGCGGGCACACCTGACGCCT
CGATGGAGGAAATCCTCTGGCGGTCCCCGCCCCACGTCCAAATGATGGGA
GGATATCTCCACTCCAACAACACTGTCCGCAGTTACGTCTCTCACCAGCT
TGCTAAAGACAGCATCTACACTCCCAACCTTCACCCCGTCCCATGGCCAT
ACTTACATGCCGCCTGCACTCAAGCAAGCAGACGCAAGTCAACCTGGCAC
CCAATCGCAGCAGAGCAAGGAAAACACACCACTGCCAGACGCCGATGCAG
CTGGCAAAGCCTCACTCGTTGGATCTTCACAGATGGTCGGCGCTGGTTCT
AGCCTGCAAGACACGCGGACACTCGCAGAGTCATTCAATCTGCTCCGAAG
GTATGGGGATGAGTTCATGGACGAACATCCGTTGGTGGGAGAGCCCGGAT
CATTCATCCTATCCCGAGTCAATGACACAGACCGAACCTCGGCGGCGAAA
CCGCCAGCCACTGCCGCGAAGGTTGGAACGCCGCAGGTCCGGGTTGATAC
ACCGGGAAAGGTATCAGAGAAGGGGGCGACGCCATCGGGGTCCGAAGAGA
ATAAAATGCGGAAGAAGAAAACTAAGGTTGGCAGTTGATTCTTTTCTACT
TCGCAGAGTCACCATTTTTTGACCCGACGTCGAATAACGCCTCACTGGCC
ATCCAAGCGAACTACAATGAAGCTTTCCGGCACTTTGTGGAGACGCGCGA
GGCCTTCGAGGGCCGCCTGAAGACTATGCAGGGCTTGGAATTCGTGGTTT
CATATGATCCCATTCAGGCAGCAGCACAACCTGATGGTCGATTTGCACAC
GAGCCGTCGAACATTTGGGTGATTCGCAAGCAGAACCGGCGCAAGAGGAC
CGGCCTGGACGATGAGGTGGCGGTTTTATCAACGTACTTTATCGTGGGAG
ACTGCATCTACATGGCCCCGTCGGTTGCGAGTGTAGTGGGAAACCGCATC
ATGGCGGGCACACCTGACGCCTCGATGGAGGAAATCCTCTGGCGGTCCCC
GCCCCACGTCCAAATGATGGGAGGATATCTCCACTCCAACAACACTGTCC
GCAGTTACGTCTCTCACCAGCTTGCTAAAGACAGCATCTACACTCCCAAC
CTTCACCCCGTCCCATGGCCATACTTACATGCCGCCTGCACTCAAGCAAG
CAGACGCAAGTCAACCTGGCACCCAATCGCAGCAGAGCAAGGAAAACACA
CCACTGCCAGACGCCGATGCAGCTGGCAAAGCCTCACTCGTTGGATCTTC
ACAGATGGTCGGCGCTGGTTCTAGCCTGCAAGACACGCGGACACTCGCAG
AGTCATTCAATCTGCTCCGAAGGTATGGGGATGAGTTCATGGACGAACAT
CCGTTGGTGGGAGAGCCCGGATCATTCATCCTATCCCGAGTCAATGACAC
AGACCGAACCTCGGCGGCGAAACCGCCAGCCACTGCCGCGAAGGTTGGAA
CGCCGCAGGTCCGGGTTGATACACCGGGAAAGGTATCAGAGAAGGGGGCG
ACGCCATCGGGGTCCGAAGAGAATAAAATGCGGAAGAAGAAAACTAAGGT
TGGCAGTTGATTCTTTTCTACTTCGCAGAGTCACCATTTTTTGACCCGAC
GTCGAATAACGCCTCACTGGCCATCCAAGCGAACTACAATGAAGCTTTCC
GGCACTTTGTGGAGACGCGCGAGGCCTTCGAGGGCCGCCTGAAGACTATG
CAGGGCTTGGAATTCGTGGTTTCATATGATCCCATTCAGGCAGCAGCACA
ACCTGATGGTCGATTTGCACACGAGCCGTCGAACATTTGGGTGATTCGCA
AGCAGAACCGGCGCAAGAGGACCGGCCTGGACGATGAGGTGGCGGTTTTA
TCAACGTACTTTATCGTGGGAGACTGCATCTACATGGCCCCGTCGGTTGC
GAGTGTAGTGGGAAACCGCATCATGGCGGGCACACCTGACGCCTCGATGG
AGGAAATCCTCTGGCGGTCCCCGCCCCACGTCCAAATGATGGGAGGATAT
CTCCACTCCAACAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MED6ATCC64974_32360Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32360-T1ATCC64974_32360-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32360-T1.cdsATCC64974_32360-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32360-T1.exon3ATCC64974_32360-T1.exon3Aspergillus niger N402exon
ATCC64974_32360-T1.exon2ATCC64974_32360-T1.exon2Aspergillus niger N402exon
ATCC64974_32360-T1.exon1ATCC64974_32360-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264S40
DBxrefInterPro:IPR007018
DBxrefInterPro:IPR016612
DBxrefInterPro:IPR038566
DBxrefPFAM:PF04934
ProductMediator of RNA polymerase II transcription subunit 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1768342..1769449 -
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