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ATCC64974_32560-T1, ATCC64974_32560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32560-T1
Unique NameATCC64974_32560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1835362..1836667-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32560-T1 ID=ATCC64974_32560-T1|Name=ATCC64974_32560-T1|organism=Aspergillus niger N402|type=mRNA|length=1306bp|location=Sequence derived from alignment at OGUI01000004.1:1835362..1836667- (Aspergillus niger N402)
ATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGC
GCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGTACGTACAGC
AGGTCCCAGCACTAAAGCCAGCTTAGGATGTCGAGTCTGATTGCCAAATT
TAAACAATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTT
GGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAA
CATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTT
CGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCG
GTTCTGGAGCTCAATGCTAGTGATGAAAGAGGTACATCTACCCCACTTGG
AGAGGGAGACGAGAGACGGCTTTAATCTAATATGCTCCAGGTATCGACGT
GGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGC
CTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGGTACGTACTA
GACAGTGAGCTACATTACCTTTCCTGGATGCTCACGGTGGTATAGTATGA
CATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCG
ACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCC
GATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGC
AAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACAT
AACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCG
TCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCA
GTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTC
CAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGA
GACACTGAATGAATTGTGGTATGTACACAGTGCAGTCTGCCAATTTTATG
TTTGTGGACTCGTCCTGACCGTATTTCTAGGGAATTGGGGTATTCCTCCC
ATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTG
TCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACAT
GCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTG
CGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAG
AATTGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1835362..1836667-

>ATCC64974_32560-T1 ID=ATCC64974_32560-T1|Name=ATCC64974_32560-T1|organism=Aspergillus niger N402|type=CDS|length=5295bp|location=Sequence derived from alignment at OGUI01000004.1:1835362..1836667- (Aspergillus niger N402)
GGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGTTCCGTGTCA
CCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGG
GAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCAGTCACTGCT
GCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGC
AGCTCTTTGAGCCGCCGAAGAATTGATATGACATCAGGTGCCCAGCAAGC
TTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGTTCGCGTTCG
CCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCGCGATGCGCT
ATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAA
ACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCG
CCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATCAACAACTTG
CAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAG
GGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCT
GCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAATGAATTGTGG
TATCGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCA
CTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGG
GTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGAAACACAGA
AACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACATGCCGCACG
TTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGC
TTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCT
CAATGCTAGTGATGAAAGAGATGGTTCAAGCCGAATCCTCAGCCAGTGCC
TCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGA
ACTGCCCTGGGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGT
TCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAA
TTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCA
GTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACA
TGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGATATGACATCAGGTGC
CCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGT
TCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCG
CGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAA
GCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGG
GCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATC
AACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAA
CGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGA
TCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAAT
GAATTGTGGTATCGACGTGGTACGGAACCGGATCAAAGGCTTTGCGCAGA
AGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAG
GCAGATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGG
AAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACA
TGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCG
ATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGT
TCTGGAGCTCAATGCTAGTGATGAAAGAGATGGTTCAAGCCGAATCCTCA
GCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCC
TGACTATGAACTGCCCTGGGAATTGGGGTATTCCTCCCATGATATCATCA
GTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCG
AAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGA
CGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCA
GGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGATATGAC
ATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGA
CTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCG
ATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCA
AATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATA
ACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGT
CAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAG
TGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCC
AGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAG
ACACTGAATGAATTGTGGTATCGACGTGGTACGGAACCGGATCAAAGGCT
TTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATC
CTTGATGAGGCAGATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGA
TATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGG
ATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAG
ACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAA
GGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGATGGTTCAAGCC
GAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGG
CGCCCCTCCTGACTATGAACTGCCCTGGGAATTGGGGTATTCCTCCCATG
ATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCA
GAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCG
CATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGA
AGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAAT
TGATATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTT
ACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATC
ATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGAC
CGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAG
TGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGA
GATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGG
TTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGA
TCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCG
GCGTTGGAGACACTGAATGAATTGTGGTATCGACGTGGTACGGAACCGGA
TCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAG
CTTGTCATCCTTGATGAGGCAGATAGGGTAGAGAAATATCGCCCGGTATA
TCTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCA
TCGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGT
ATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGA
CGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGATG
GTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCA
TACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGGAATTGGGGTATT
CCTCCCATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCC
ACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTAC
GCACATGCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCT
GCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCG
CCGAAGAATTGATATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAA
TGGAGATTTACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCA
AATAAAATCATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGC
TCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATG
CTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGT
GCTGAGGGAGATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTC
GGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCC
CGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAG
GTTGATGCGGCGTTGGAGACACTGAATGAATTGTGGTATCGACGTGGTAC
GGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGT
CGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGGGTAGAGAAATATCG
CCCGGTATATCTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCT
TGAAGATCATCGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGC
ATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCT
ACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATG
AAAGAGATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCT
CAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RFC4ATCC64974_32560Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32560-T1ATCC64974_32560-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32560-T1.cdsATCC64974_32560-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32560-T1.exon5ATCC64974_32560-T1.exon5Aspergillus niger N402exon
ATCC64974_32560-T1.exon4ATCC64974_32560-T1.exon4Aspergillus niger N402exon
ATCC64974_32560-T1.exon3ATCC64974_32560-T1.exon3Aspergillus niger N402exon
ATCC64974_32560-T1.exon2ATCC64974_32560-T1.exon2Aspergillus niger N402exon
ATCC64974_32560-T1.exon1ATCC64974_32560-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR013748
DBxrefInterPro:IPR003593
DBxrefPFAM:PF08542
DBxrefPFAM:PF13173
DBxrefPFAM:PF00004
Productreplication factor C subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1835362..1836667 -
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