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ATCC64974_32600-T1, ATCC64974_32600-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32600-T1
Unique NameATCC64974_32600-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1842118..1843638-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32600-T1 ID=ATCC64974_32600-T1|Name=ATCC64974_32600-T1|organism=Aspergillus niger N402|type=mRNA|length=1521bp|location=Sequence derived from alignment at OGUI01000004.1:1842118..1843638- (Aspergillus niger N402)
ATGAAGCCGCTCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAA
GGTGAGAGCGTTTACCCAGCCCGGGATCCTGGAATTTCCTTCCTTTTGTA
AGAGACTGCTTACTGACGGTTGCAGTTAGCTTGCAGTCGACCTAGCCTCG
CGATTTAACGGGGAGATCATCAATGGCGATGCCATGCAAATGTATCGCGG
TCTCCCTATCATCACCAACCAGATCCCCGTCGAGGAGCGAAACGGTATCC
CGCATCACTTGATCAGCTGCGTTGAGCTCGAGGAACAGCCGTGGTTTGTC
GGCAGATTCAGAAGCGAAAGTCTCCGACTCATTGACGACATTCACGCCAG
AGGGAAAACTCCCGTCTTGGTCGGTGGTACCCATTACTATACACAGGCCG
TCTTGTTTAAAGACCAGCTACTTGGCGAGGATGCTACTGCAGACGATGTG
CAGGAGGAAGCCGTAAATCAATTAACGGAAGATAACGACCCGAAATCCTC
GACTAAATGGCCCATCCTCGACGCTCCCACTGAGGTGGTTCTACAAAAAC
TGAGAGAGGTCGATCCCGTCATGGCGGATCGATGGCACCCGAACGAAGCA
CGCAAAATCCGTCGCTCCCTAGAGATATATTTCCAGACCGGCAGGCCCGC
GTCGGAAATTTACGCGGAGCAACAGCGGACAAAGCAGGCGGCCCTGATTC
GGGATGACTCCCTTACAGGTGCCGGTCACTTGCGATTCCCGACGATGATA
TTCTGGGTGCACTCGGAGAAGGAGACGCTGAACAGTCGACTGGACAAGCG
GGTTGATGCAATGCTAGAGCAAGGGTTGATGACAGAAGCCAGGCAGATGT
CGGATTACCTTCAGGAAAAGAAAGCTCAGGGCGTCTCCGTTGACCAGAGC
CGCGGCGTATGGGTGTCTATCGGATACAAGGAGCTAGCACCCTATTTCGA
AGCACTATATGCCGGCTCGGCGGATGAGGCCGAGCTAGAGACCCTCAAGA
AATCCGGCATTGAGTCGATCAAGACTGCAACGCGGCAGTATGCCATGTCT
CAAATCAAATGGATCAGAAACAAGTTATGGCAGGCCCTTGCAGATGCGAG
TTCGACCAATCGTCTCTACCTCCTTGACAGCACTAATGTCGACGCATGGG
AGCAGAATATTACTGAGCCGTCCGAACGTCTTGTCCGTGCTCTGCTGGAG
GATCAACCCACTCCCGATCCGAAGTCACTGTCAGAACTCGCAAGGACGGT
CTTGGGCGCCAAGGAGGCGCAGCCACATAAGGAGTCGGGATCCGTCACCA
AGTGCAGGACTTGTGACATCTGCCACAAGACCATGATGGGCGATGAGCAA
TGGCATATACACATCAACGGCTCGGTCCATAGGAGAGCTCTCAAGAGCGC
CGCCAAACGGGCTGCGCGTGACGAATATCTACGAAAGCGACAAAAGCTGC
TACACGAGGGTGAGGAGAAGGGCTCTGAATCTCCCGCGGAGCCAGATGTA
CAAGCCCCTCCGTCCTCTTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1842118..1843638-

>ATCC64974_32600-T1 ID=ATCC64974_32600-T1|Name=ATCC64974_32600-T1|organism=Aspergillus niger N402|type=CDS|length=2886bp|location=Sequence derived from alignment at OGUI01000004.1:1842118..1843638- (Aspergillus niger N402)
CTTGCAGTCGACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCGA
TGCCATGCAAATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCCG
TCGAGGAGCGAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCTC
GAGGAACAGCCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGACT
CATTGACGACATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGTA
CCCATTACTATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGAG
GATGCTACTGCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGGA
AGATAACGACCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCCA
CTGAGGTGGTTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGAT
CGATGGCACCCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATATA
TTTCCAGACCGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGGA
CAAAGCAGGCGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCAC
TTGCGATTCCCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGCT
GAACAGTCGACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTGA
TGACAGAAGCCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCAG
GGCGTCTCCGTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACAA
GGAGCTAGCACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAGG
CCGAGCTAGAGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGCA
ACGCGGCAGTATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTATG
GCAGGCCCTTGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGACA
GCACTAATGTCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACGT
CTTGTCCGTGCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCACT
GTCAGAACTCGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACATA
AGGAGTCGGGATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAAG
ACCATGATGGGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCCA
TAGGAGAGCTCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATATC
TACGAAAGCGACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGAA
TCTCCCGCGGAGCCAGATGTACAAGCCCCTCCGTCCTCTTAAATGAAGCC
GCTCATCGCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAAGCTTGCAG
TCGACCTAGCCTCGCGATTTAACGGGGAGATCATCAATGGCGATGCCATG
CAAATGTATCGCGGTCTCCCTATCATCACCAACCAGATCCCCGTCGAGGA
GCGAAACGGTATCCCGCATCACTTGATCAGCTGCGTTGAGCTCGAGGAAC
AGCCGTGGTTTGTCGGCAGATTCAGAAGCGAAAGTCTCCGACTCATTGAC
GACATTCACGCCAGAGGGAAAACTCCCGTCTTGGTCGGTGGTACCCATTA
CTATACACAGGCCGTCTTGTTTAAAGACCAGCTACTTGGCGAGGATGCTA
CTGCAGACGATGTGCAGGAGGAAGCCGTAAATCAATTAACGGAAGATAAC
GACCCGAAATCCTCGACTAAATGGCCCATCCTCGACGCTCCCACTGAGGT
GGTTCTACAAAAACTGAGAGAGGTCGATCCCGTCATGGCGGATCGATGGC
ACCCGAACGAAGCACGCAAAATCCGTCGCTCCCTAGAGATATATTTCCAG
ACCGGCAGGCCCGCGTCGGAAATTTACGCGGAGCAACAGCGGACAAAGCA
GGCGGCCCTGATTCGGGATGACTCCCTTACAGGTGCCGGTCACTTGCGAT
TCCCGACGATGATATTCTGGGTGCACTCGGAGAAGGAGACGCTGAACAGT
CGACTGGACAAGCGGGTTGATGCAATGCTAGAGCAAGGGTTGATGACAGA
AGCCAGGCAGATGTCGGATTACCTTCAGGAAAAGAAAGCTCAGGGCGTCT
CCGTTGACCAGAGCCGCGGCGTATGGGTGTCTATCGGATACAAGGAGCTA
GCACCCTATTTCGAAGCACTATATGCCGGCTCGGCGGATGAGGCCGAGCT
AGAGACCCTCAAGAAATCCGGCATTGAGTCGATCAAGACTGCAACGCGGC
AGTATGCCATGTCTCAAATCAAATGGATCAGAAACAAGTTATGGCAGGCC
CTTGCAGATGCGAGTTCGACCAATCGTCTCTACCTCCTTGACAGCACTAA
TGTCGACGCATGGGAGCAGAATATTACTGAGCCGTCCGAACGTCTTGTCC
GTGCTCTGCTGGAGGATCAACCCACTCCCGATCCGAAGTCACTGTCAGAA
CTCGCAAGGACGGTCTTGGGCGCCAAGGAGGCGCAGCCACATAAGGAGTC
GGGATCCGTCACCAAGTGCAGGACTTGTGACATCTGCCACAAGACCATGA
TGGGCGATGAGCAATGGCATATACACATCAACGGCTCGGTCCATAGGAGA
GCTCTCAAGAGCGCCGCCAAACGGGCTGCGCGTGACGAATATCTACGAAA
GCGACAAAAGCTGCTACACGAGGGTGAGGAGAAGGGCTCTGAATCTCCCG
CGGAGCCAGATGTACAAGCCCCTCCGTCCTCTTAAATGAAGCCGCTCATC
GCTGTCGTTGGTGCCACAGGCACGGGCAAGTCAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0052381tRNA dimethylallyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32600ATCC64974_32600Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32600-T1ATCC64974_32600-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32600-T1.cdsATCC64974_32600-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32600-T1.exon2ATCC64974_32600-T1.exon2Aspergillus niger N402exon
ATCC64974_32600-T1.exon1ATCC64974_32600-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09262C5Z
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR030666
DBxrefInterPro:IPR018022
DBxrefPFAM:PF01715
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1842118..1843638 -
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