You are here

Home

ATCC64974_3280-T1, ATCC64974_3280-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_3280-T1
Unique NameATCC64974_3280-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1003590..1004606+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_3280-T1 ID=ATCC64974_3280-T1|Name=ATCC64974_3280-T1|organism=Aspergillus niger N402|type=mRNA|length=1017bp|location=Sequence derived from alignment at OGUI01000001.1:1003590..1004606+ (Aspergillus niger N402)
ATGCTCATGGAGCCTAATTGCGTCAGCTGCCGGGTTCCAATCATGGAGGC
CGCTTATTTCAAGGAAGATGGTGACGAAAAGACGCGACCTGCAACGACTC
TGGGGGCCGTTAACCGGAAGAAAAAGCAGGGCAAAAAGACAACCACCACG
AAGAAGCAAGCCAGGAGCAGTATGCGCCGAGTCACCGCACCACAAATCGA
GGAATCCGACGAAGAGCCAGATGCTGACGAGGATACGGACTGGATTAAGG
CATGTGCTCGGCATATGCCCAGTGCTAAACTCACAAAGATACGCGAGATT
CTTACCGAGTGGCTTGCACAGGATTCCCCGGGCAAGATAGTCATATTCAC
CCAGTTTTTAGATTTCGTCCAAATACTGGCTACTATGTGCCAAGCAGAAA
ACTGGCCATACGTTTTAGTGAGCAGAAAAGTCCTCGAGTATGCCCAAGAC
TCAGGTTGGCTAATATTCTATAGTTGACTGGGAAACTGAGTCTAGCAGTT
CGCGAAAATAATATGACGTTGTTCAGTGATAAAGATAGCGAAAAGAGAAT
AATGATCGCCAGTCTGAAGGCCGGGGGCACAGGACTAGATCTATCAGCCG
CCAACAAGTGCATTCTTGTTGACTTGTGGTGGAACGAAGCTATTCAGGAG
CAGGTATGTATACTTCTGTCCGATATCACTACCTAATAGGACTTTGGTGC
AGCTGTTAACACTCCCATTTCAGGCCTTTTGCCGCTTGTTCCGAATTGGG
CAAGAAAGCGAGGTGGAATTTGTGAAGCTTATCATCGAGAACTCTATTGA
CGACTACCTGCTCAATTTGCAGACGCATAAGACGGCTATTATAACCGGAG
CAATGGGCGAAAGAGCCCTAGCGGGGCGGGACACCATTGAGGACCTCCTT
CGAATGTTCGCAGATGTCGAGAAGGACCCTAGAGGAGTGCTTCACCTCAA
GGCCAAGACAGCGTCAAGGGACATTAGGATTGGGGCTGGATTCCGACCGA
CTTTTGGGGTTTTTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:1003590..1004606+

>ATCC64974_3280-T1 ID=ATCC64974_3280-T1|Name=ATCC64974_3280-T1|organism=Aspergillus niger N402|type=CDS|length=2673bp|location=Sequence derived from alignment at OGUI01000001.1:1003590..1004606+ (Aspergillus niger N402)
ATGCTCATGGAGCCTAATTGCGTCAGCTGCCGGGTTCCAATCATGGAGGC
CGCTTATTTCAAGGAAGATGGTGACGAAAAGACGCGACCTGCAACGACTC
TGGGGGCCGTTAACCGGAAGAAAAAGCAGGGCAAAAAGACAACCACCACG
AAGAAGCAAGCCAGGAGCAGTATGCGCCGAGTCACCGCACCACAAATCGA
GGAATCCGACGAAGAGCCAGATGCTGACGAGGATACGGACTGGATTAAGG
CATGTGCTCGGCATATGCCCAGTGCTAAACTCACAAAGATACGCGAGATT
CTTACCGAGTGGCTTGCACAGGATTCCCCGGGCAAGATAGTCATATTCAC
CCAGTTTTTAGATTTCGTCCAAATACTGGCTACTATGTGCCAAGCAGAAA
ACTGGCCATACGTTTTATTGACTGGGAAACTGAGTCTAGCAGTTCGCGAA
AATAATATGACGTTGTTCAGTGATAAAGATAGCGAAAAGAGAATAATGAT
CGCCAGTCTGAAGGCCGGGGGCACAGGACTAGATCTATCAGCCGCCAACA
AGTGCATTCTTGTTGACTTGTGGTGGAACGAAGCTATTCAGGAGCAGGCC
TTTTGCCGCTTGTTCCGAATTGGGCAAGAAAGCGAGGTGGAATTTGTGAA
GCTTATCATCGAGAACTCTATTGACGACTACCTGCTCAATTTGCAGACGC
ATAAGACGGCTATTATAACCGGAGCAATGGGCGAAAGAGCCCTAGCGGGG
CGGGACACCATTGAGGACCTCCTTCGAATGTTCGCAGATGTCGAGAAGGA
CCCTAGAGGAGTGCTTCACCTCAAGGCCAAGACAGCGTCAAGGGACATTA
GGATTGGGGCTGGATTCCGACCGACTTTTGGGGTTTTTTGAATGCTCATG
GAGCCTAATTGCGTCAGCTGCCGGGTTCCAATCATGGAGGCCGCTTATTT
CAAGGAAGATGGTGACGAAAAGACGCGACCTGCAACGACTCTGGGGGCCG
TTAACCGGAAGAAAAAGCAGGGCAAAAAGACAACCACCACGAAGAAGCAA
GCCAGGAGCAGTATGCGCCGAGTCACCGCACCACAAATCGAGGAATCCGA
CGAAGAGCCAGATGCTGACGAGGATACGGACTGGATTAAGGCATGTGCTC
GGCATATGCCCAGTGCTAAACTCACAAAGATACGCGAGATTCTTACCGAG
TGGCTTGCACAGGATTCCCCGGGCAAGATAGTCATATTCACCCAGTTTTT
AGATTTCGTCCAAATACTGGCTACTATGTGCCAAGCAGAAAACTGGCCAT
ACGTTTTATTGACTGGGAAACTGAGTCTAGCAGTTCGCGAAAATAATATG
ACGTTGTTCAGTGATAAAGATAGCGAAAAGAGAATAATGATCGCCAGTCT
GAAGGCCGGGGGCACAGGACTAGATCTATCAGCCGCCAACAAGTGCATTC
TTGTTGACTTGTGGTGGAACGAAGCTATTCAGGAGCAGGCCTTTTGCCGC
TTGTTCCGAATTGGGCAAGAAAGCGAGGTGGAATTTGTGAAGCTTATCAT
CGAGAACTCTATTGACGACTACCTGCTCAATTTGCAGACGCATAAGACGG
CTATTATAACCGGAGCAATGGGCGAAAGAGCCCTAGCGGGGCGGGACACC
ATTGAGGACCTCCTTCGAATGTTCGCAGATGTCGAGAAGGACCCTAGAGG
AGTGCTTCACCTCAAGGCCAAGACAGCGTCAAGGGACATTAGGATTGGGG
CTGGATTCCGACCGACTTTTGGGGTTTTTTGAATGCTCATGGAGCCTAAT
TGCGTCAGCTGCCGGGTTCCAATCATGGAGGCCGCTTATTTCAAGGAAGA
TGGTGACGAAAAGACGCGACCTGCAACGACTCTGGGGGCCGTTAACCGGA
AGAAAAAGCAGGGCAAAAAGACAACCACCACGAAGAAGCAAGCCAGGAGC
AGTATGCGCCGAGTCACCGCACCACAAATCGAGGAATCCGACGAAGAGCC
AGATGCTGACGAGGATACGGACTGGATTAAGGCATGTGCTCGGCATATGC
CCAGTGCTAAACTCACAAAGATACGCGAGATTCTTACCGAGTGGCTTGCA
CAGGATTCCCCGGGCAAGATAGTCATATTCACCCAGTTTTTAGATTTCGT
CCAAATACTGGCTACTATGTGCCAAGCAGAAAACTGGCCATACGTTTTAT
TGACTGGGAAACTGAGTCTAGCAGTTCGCGAAAATAATATGACGTTGTTC
AGTGATAAAGATAGCGAAAAGAGAATAATGATCGCCAGTCTGAAGGCCGG
GGGCACAGGACTAGATCTATCAGCCGCCAACAAGTGCATTCTTGTTGACT
TGTGGTGGAACGAAGCTATTCAGGAGCAGGCCTTTTGCCGCTTGTTCCGA
ATTGGGCAAGAAAGCGAGGTGGAATTTGTGAAGCTTATCATCGAGAACTC
TATTGACGACTACCTGCTCAATTTGCAGACGCATAAGACGGCTATTATAA
CCGGAGCAATGGGCGAAAGAGCCCTAGCGGGGCGGGACACCATTGAGGAC
CTCCTTCGAATGTTCGCAGATGTCGAGAAGGACCCTAGAGGAGTGCTTCA
CCTCAAGGCCAAGACAGCGTCAAGGGACATTAGGATTGGGGCTGGATTCC
GACCGACTTTTGGGGTTTTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_3280ATCC64974_3280Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3280-T1.exon1ATCC64974_3280-T1.exon1Aspergillus niger N402exon
ATCC64974_3280-T1.exon2ATCC64974_3280-T1.exon2Aspergillus niger N402exon
ATCC64974_3280-T1.exon3ATCC64974_3280-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3280-T1.cdsATCC64974_3280-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_3280-T1ATCC64974_3280-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00271
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1003590..1004606 +
Powered by Drupal