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ATCC64974_32860-T1, ATCC64974_32860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32860-T1
Unique NameATCC64974_32860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:1919406..1920447+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32860-T1 ID=ATCC64974_32860-T1|Name=ATCC64974_32860-T1|organism=Aspergillus niger N402|type=mRNA|length=1042bp|location=Sequence derived from alignment at OGUI01000004.1:1919406..1920447+ (Aspergillus niger N402)
ATGGCATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATT
CCAGGTAATCTTTCCTCACCCCATCCGGCTCTTTCGGCGAAGTCATATTA
ATAGCTTTCAGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGAC
ATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTC
GGCTGAATCCAGTGCACTGTTAGCGCTCTCACGACTACCTTGAACAACCA
GGAGAGCTAACTTGTGTTCTTACAGACAATCGACCGAACTGCAAACGAAA
CAATGGTCTGAACTTTGACTGATAATTCCAATAAATTGGTCTCGATGACA
TGCGCTTACTCATGATTAGGAGGGAACGCCTTGAGAGCATTAATAGTAAG
GCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAG
GAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACA
GTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTAC
TACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGA
ACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGA
ATTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAAC
CCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTA
TGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGGTATAT
TGCTATTCTCATCTCGCTTTGTCCTGGTCACTGTTTGCCACGTCACTAAC
GATATCGTGGACACAGATGTAGCTGCAAACATGGACAGCACTCTTCCAGA
AGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCAAG
ATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCTTC
GTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:1919406..1920447+

>ATCC64974_32860-T1 ID=ATCC64974_32860-T1|Name=ATCC64974_32860-T1|organism=Aspergillus niger N402|type=CDS|length=3960bp|location=Sequence derived from alignment at OGUI01000004.1:1919406..1920447+ (Aspergillus niger N402)
ATGGCATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATT
CCAGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAACCC
ATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCTGAA
TCCAGTGCACTACAATCGACCGAACTGCAAACGAAACAATGGAGGGAACG
CCTTGAGAGCATTAATAGTAAGGCTCGACTTCCCAGGAGCGTTCAAGCTG
TGTACCTACGACCCCTCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTCTGT
GATCTTCAGTTGAGATCTTACAGTGTACGGAACGTCGAATTTTTCGCCGA
TTTTGCTGTGCGGGCCGCTTACTACCTGAACCTTCCTGTCTCGGGGCCGG
TGCCCTTGCCACGAATCGTTGAACGATGGACCGTCCCTAGAAGTAACTTC
GTGCACAAAAAGAGTCAGGAGAATTTTGAAAGAATAACACTTCGACGCTT
GGTACAAATCAAAGACGGCAACCCTCAAGTTGTACAGACATGGCTAGCAT
TCTTGCGCAAGCATGCTTTCTATGGAGTCGGCATGAAAGCAAATGTCTGG
GAACATGAAAGCCTCGATGTAGCTGCAAACATGGACAGCACTCTTCCAGA
AGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCAAG
ATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCTTC
GTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAAATGGCATT
ATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATTCCAGTTAC
TAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAACCCATCATGCA
CAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCTGAATCCAGTGC
ACTACAATCGACCGAACTGCAAACGAAACAATGGAGGGAACGCCTTGAGA
GCATTAATAGTAAGGCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTA
CGACCCCTCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCA
GTTGAGATCTTACAGTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTG
TGCGGGCCGCTTACTACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTG
CCACGAATCGTTGAACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAA
AAAGAGTCAGGAGAATTTTGAAAGAATAACACTTCGACGCTTGGTACAAA
TCAAAGACGGCAACCCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGC
AAGCATGCTTTCTATGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGA
AAGCCTCGATGTAGCTGCAAACATGGACAGCACTCTTCCAGAAGTCAAGA
AGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCAAGATGCAACA
TCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCTTCGTTGCATA
CAAGGGCCCTTTAACTACAGCACGCAAGGCATAAATGGCATTATTCCTCA
ACTCTCGGCTACTCAAATGCACTGGCAGACAATTCCAGTTACTAGCAGGT
TTTAGAGGCTACAGCACTTTCTCTGACATAACCCATCATGCACAGCCAGC
GAGCGATTCCCTCCACCCAGCAGCCTCGGCTGAATCCAGTGCACTACAAT
CGACCGAACTGCAAACGAAACAATGGAGGGAACGCCTTGAGAGCATTAAT
AGTAAGGCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCT
CCGGAGGAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGAT
CTTACAGTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCC
GCTTACTACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAAT
CGTTGAACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTC
AGGAGAATTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGAC
GGCAACCCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGC
TTTCTATGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCG
ATGTAGCTGCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTT
GAGCCTTACCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGA
CTCTATCTTAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCC
CTTTAACTACAGCACGCAAGGCATAAATGGCATTATTCCTCAACTCTCGG
CTACTCAAATGCACTGGCAGACAATTCCAGTTACTAGCAGGTTTTAGAGG
CTACAGCACTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGATT
CCCTCCACCCAGCAGCCTCGGCTGAATCCAGTGCACTACAATCGACCGAA
CTGCAAACGAAACAATGGAGGGAACGCCTTGAGAGCATTAATAGTAAGGC
TCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGA
AGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGT
GTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTA
CCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAAC
GATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAAT
TTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACCC
TCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATG
GAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGATGTAGCT
GCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTA
CCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCT
TAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACT
ACAGCACGCAAGGCATAAATGGCATTATTCCTCAACTCTCGGCTACTCAA
ATGCACTGGCAGACAATTCCAGTTACTAGCAGGTTTTAGAGGCTACAGCA
CTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCAC
CCAGCAGCCTCGGCTGAATCCAGTGCACTACAATCGACCGAACTGCAAAC
GAAACAATGGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTCGACTTC
CCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAGGCCGAG
TTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGTACGGAA
CGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACCTGAACC
TTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGATGGACC
GTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAAG
AATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTCAAGTTG
TACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGAGTCGGC
ATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGATGTAGCTGCAAACAT
GGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTACCTTTCAC
AATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCTTAGACATC
CTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACTACAGCACG
CAAGGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM10ATCC64974_32860Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32860-T1ATCC64974_32860-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32860-T1.exon1ATCC64974_32860-T1.exon1Aspergillus niger N402exon
ATCC64974_32860-T1.exon2ATCC64974_32860-T1.exon2Aspergillus niger N402exon
ATCC64974_32860-T1.exon3ATCC64974_32860-T1.exon3Aspergillus niger N402exon
ATCC64974_32860-T1.exon4ATCC64974_32860-T1.exon4Aspergillus niger N402exon
ATCC64974_32860-T1.exon5ATCC64974_32860-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32860-T1.cdsATCC64974_32860-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR001848
DBxrefInterPro:IPR036838
DBxrefInterPro:IPR027486
DBxrefPFAM:PF00338
Productmitochondrial 37S ribosomal protein rsm10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:1919406..1920447 +
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