You are here

Home

ATCC64974_32890-T1, ATCC64974_32890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_32890-T1
Unique NameATCC64974_32890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:2015102..2016401+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_32890-T1 ID=ATCC64974_32890-T1|Name=ATCC64974_32890-T1|organism=Aspergillus niger N402|type=mRNA|length=1300bp|location=Sequence derived from alignment at OGUI01000004.1:2015102..2016401+ (Aspergillus niger N402)
ATGCCCCAATCACCAATGTCCAACACTATTCAGGTATGACTATAGAGGCT
ATCATATACATCGCCAAGCTCACGACTGTTGTCGTCTTAAAAGGACCATT
TCACGGAGAAAACGCCAAGTTTTATCAATAAAACCAGGTCTAGAATTTCC
GAACCCGTTGTTGCTGCTTTCATAGCCGGAGGAGTAGCGGGTGCAGTGTC
GAGGACACTTGTATCACCACTCGAACGTCTCAAAATCCTTCTCCAGATTC
AGAGTGTCGGCAGAGAGGAGTACAAATTATCAATATGGAGAGCTCTCGTC
AAAATCGGAAAGGAAGAGGGATGGAAAGGCTTCATGCGCGGAAATGGTAC
AAATTGTATTCGCATCATTCCTTATTCGGCGGTTCAATTCGGCAGCTATA
ATTTTTACAAAAAGGTGAGTTGAATATGAATTCGTACAGGCTTTGAGATT
GTATACCCTGAGTGTACAAGGATTTGAAGTGCGAATATATAAGCCATAAA
GGACGACTAGGTTGGAGGCTTGATTAACGAAGCACTCTAGTTCGCGGAAT
CTTCGCCAAATGCCGAGTTGTCAGCCATGCAGCGTCTTCTTTGTGGTGCC
GCTGCCGGCATCACGTCTGTGACAATCACCTACCCTCTTGATATTGTCAG
AACTCGACTCTCCATCCAGTCAGCGTCATTTGAAGCTCTCAGTCACCGAG
GGGTTGGCGAGCAGTTACCGGGCATGTTTACCACCATGGTATTGATATAT
AGAAACGAAGGCGGCATCGTAGGTCTTTACCGTGGCATTATACCTACTGT
TGCTGGTGTCGCCCCTTATGTCAGTAAGGCCGGAACACTCATACGATACC
CACCTGTGGCTAAGTGCATTTAGGTCGGCCTCAACTTCATGACGTATGAA
TCTGTCCGCAAGTATTTGACACCTGAAGGCGATGCGACACCAGGACCCCT
GCGTAAACTACTTGCCGGTGCAGTGTCCGGCGCAGTAGCACAGACATGCA
CATACCCATTGTAAGCCTCACCAGAAAACATCGATTCTTCTCCCTCATCA
TGGTTAGCTAATATGAAGGTCACGGCTCAGCGATGTCCTACGACGCCGCT
TTCAGATTAACACGATGTCTGGGATGGGATATCAATATGCATCAATCATG
GACGCCGTAAAGGCCATTGTGGCACAAGAGGGCTTGCGGGGCCTGTTCAA
AGGAATCGTGCCAAATCTTCTTAAAGTGGCTCCCAGTATGGCTAGTAGTT
GGCTCAGCTTCGAGTTGACCCGGGACTTTCTAGTGAGTTTGGAGGAATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:2015102..2016401+

>ATCC64974_32890-T1 ID=ATCC64974_32890-T1|Name=ATCC64974_32890-T1|organism=Aspergillus niger N402|type=CDS|length=4950bp|location=Sequence derived from alignment at OGUI01000004.1:2015102..2016401+ (Aspergillus niger N402)
ATGCCCCAATCACCAATGTCCAACACTATTCAGGACCATTTCACGGAGAA
AACGCCAAGTTTTATCAATAAAACCAGGTCTAGAATTTCCGAACCCGTTG
TTGCTGCTTTCATAGCCGGAGGAGTAGCGGGTGCAGTGTCGAGGACACTT
GTATCACCACTCGAACGTCTCAAAATCCTTCTCCAGATTCAGAGTGTCGG
CAGAGAGGAGTACAAATTATCAATATGGAGAGCTCTCGTCAAAATCGGAA
AGGAAGAGGGATGGAAAGGCTTCATGCGCGGAAATGGTACAAATTGTATT
CGCATCATTCCTTATTCGGCGGTTCAATTCGGCAGCTATAATTTTTACAA
AAAGTTCGCGGAATCTTCGCCAAATGCCGAGTTGTCAGCCATGCAGCGTC
TTCTTTGTGGTGCCGCTGCCGGCATCACGTCTGTGACAATCACCTACCCT
CTTGATATTGTCAGAACTCGACTCTCCATCCAGTCAGCGTCATTTGAAGC
TCTCAGTCACCGAGGGGTTGGCGAGCAGTTACCGGGCATGTTTACCACCA
TGGTATTGATATATAGAAACGAAGGCGGCATCGTAGGTCTTTACCGTGGC
ATTATACCTACTGTTGCTGGTGTCGCCCCTTATGTCGGCCTCAACTTCAT
GACGTATGAATCTGTCCGCAAGTATTTGACACCTGAAGGCGATGCGACAC
CAGGACCCCTGCGTAAACTACTTGCCGGTGCAGTGTCCGGCGCAGTAGCA
CAGACATGCACATACCCATTCGATGTCCTACGACGCCGCTTTCAGATTAA
CACGATGTCTGGGATGGGATATCAATATGCATCAATCATGGACGCCGTAA
AGGCCATTGTGGCACAAGAGGGCTTGCGGGGCCTGTTCAAAGGAATCGTG
CCAAATCTTCTTAAAGTGGCTCCCAGTATGGCTAGTAGTTGGCTCAGCTT
CGAGTTGACCCGGGACTTTCTAGTGAGTTTGGAGGAATAAATGCCCCAAT
CACCAATGTCCAACACTATTCAGGACCATTTCACGGAGAAAACGCCAAGT
TTTATCAATAAAACCAGGTCTAGAATTTCCGAACCCGTTGTTGCTGCTTT
CATAGCCGGAGGAGTAGCGGGTGCAGTGTCGAGGACACTTGTATCACCAC
TCGAACGTCTCAAAATCCTTCTCCAGATTCAGAGTGTCGGCAGAGAGGAG
TACAAATTATCAATATGGAGAGCTCTCGTCAAAATCGGAAAGGAAGAGGG
ATGGAAAGGCTTCATGCGCGGAAATGGTACAAATTGTATTCGCATCATTC
CTTATTCGGCGGTTCAATTCGGCAGCTATAATTTTTACAAAAAGTTCGCG
GAATCTTCGCCAAATGCCGAGTTGTCAGCCATGCAGCGTCTTCTTTGTGG
TGCCGCTGCCGGCATCACGTCTGTGACAATCACCTACCCTCTTGATATTG
TCAGAACTCGACTCTCCATCCAGTCAGCGTCATTTGAAGCTCTCAGTCAC
CGAGGGGTTGGCGAGCAGTTACCGGGCATGTTTACCACCATGGTATTGAT
ATATAGAAACGAAGGCGGCATCGTAGGTCTTTACCGTGGCATTATACCTA
CTGTTGCTGGTGTCGCCCCTTATGTCGGCCTCAACTTCATGACGTATGAA
TCTGTCCGCAAGTATTTGACACCTGAAGGCGATGCGACACCAGGACCCCT
GCGTAAACTACTTGCCGGTGCAGTGTCCGGCGCAGTAGCACAGACATGCA
CATACCCATTCGATGTCCTACGACGCCGCTTTCAGATTAACACGATGTCT
GGGATGGGATATCAATATGCATCAATCATGGACGCCGTAAAGGCCATTGT
GGCACAAGAGGGCTTGCGGGGCCTGTTCAAAGGAATCGTGCCAAATCTTC
TTAAAGTGGCTCCCAGTATGGCTAGTAGTTGGCTCAGCTTCGAGTTGACC
CGGGACTTTCTAGTGAGTTTGGAGGAATAAATGCCCCAATCACCAATGTC
CAACACTATTCAGGACCATTTCACGGAGAAAACGCCAAGTTTTATCAATA
AAACCAGGTCTAGAATTTCCGAACCCGTTGTTGCTGCTTTCATAGCCGGA
GGAGTAGCGGGTGCAGTGTCGAGGACACTTGTATCACCACTCGAACGTCT
CAAAATCCTTCTCCAGATTCAGAGTGTCGGCAGAGAGGAGTACAAATTAT
CAATATGGAGAGCTCTCGTCAAAATCGGAAAGGAAGAGGGATGGAAAGGC
TTCATGCGCGGAAATGGTACAAATTGTATTCGCATCATTCCTTATTCGGC
GGTTCAATTCGGCAGCTATAATTTTTACAAAAAGTTCGCGGAATCTTCGC
CAAATGCCGAGTTGTCAGCCATGCAGCGTCTTCTTTGTGGTGCCGCTGCC
GGCATCACGTCTGTGACAATCACCTACCCTCTTGATATTGTCAGAACTCG
ACTCTCCATCCAGTCAGCGTCATTTGAAGCTCTCAGTCACCGAGGGGTTG
GCGAGCAGTTACCGGGCATGTTTACCACCATGGTATTGATATATAGAAAC
GAAGGCGGCATCGTAGGTCTTTACCGTGGCATTATACCTACTGTTGCTGG
TGTCGCCCCTTATGTCGGCCTCAACTTCATGACGTATGAATCTGTCCGCA
AGTATTTGACACCTGAAGGCGATGCGACACCAGGACCCCTGCGTAAACTA
CTTGCCGGTGCAGTGTCCGGCGCAGTAGCACAGACATGCACATACCCATT
CGATGTCCTACGACGCCGCTTTCAGATTAACACGATGTCTGGGATGGGAT
ATCAATATGCATCAATCATGGACGCCGTAAAGGCCATTGTGGCACAAGAG
GGCTTGCGGGGCCTGTTCAAAGGAATCGTGCCAAATCTTCTTAAAGTGGC
TCCCAGTATGGCTAGTAGTTGGCTCAGCTTCGAGTTGACCCGGGACTTTC
TAGTGAGTTTGGAGGAATAAATGCCCCAATCACCAATGTCCAACACTATT
CAGGACCATTTCACGGAGAAAACGCCAAGTTTTATCAATAAAACCAGGTC
TAGAATTTCCGAACCCGTTGTTGCTGCTTTCATAGCCGGAGGAGTAGCGG
GTGCAGTGTCGAGGACACTTGTATCACCACTCGAACGTCTCAAAATCCTT
CTCCAGATTCAGAGTGTCGGCAGAGAGGAGTACAAATTATCAATATGGAG
AGCTCTCGTCAAAATCGGAAAGGAAGAGGGATGGAAAGGCTTCATGCGCG
GAAATGGTACAAATTGTATTCGCATCATTCCTTATTCGGCGGTTCAATTC
GGCAGCTATAATTTTTACAAAAAGTTCGCGGAATCTTCGCCAAATGCCGA
GTTGTCAGCCATGCAGCGTCTTCTTTGTGGTGCCGCTGCCGGCATCACGT
CTGTGACAATCACCTACCCTCTTGATATTGTCAGAACTCGACTCTCCATC
CAGTCAGCGTCATTTGAAGCTCTCAGTCACCGAGGGGTTGGCGAGCAGTT
ACCGGGCATGTTTACCACCATGGTATTGATATATAGAAACGAAGGCGGCA
TCGTAGGTCTTTACCGTGGCATTATACCTACTGTTGCTGGTGTCGCCCCT
TATGTCGGCCTCAACTTCATGACGTATGAATCTGTCCGCAAGTATTTGAC
ACCTGAAGGCGATGCGACACCAGGACCCCTGCGTAAACTACTTGCCGGTG
CAGTGTCCGGCGCAGTAGCACAGACATGCACATACCCATTCGATGTCCTA
CGACGCCGCTTTCAGATTAACACGATGTCTGGGATGGGATATCAATATGC
ATCAATCATGGACGCCGTAAAGGCCATTGTGGCACAAGAGGGCTTGCGGG
GCCTGTTCAAAGGAATCGTGCCAAATCTTCTTAAAGTGGCTCCCAGTATG
GCTAGTAGTTGGCTCAGCTTCGAGTTGACCCGGGACTTTCTAGTGAGTTT
GGAGGAATAAATGCCCCAATCACCAATGTCCAACACTATTCAGGACCATT
TCACGGAGAAAACGCCAAGTTTTATCAATAAAACCAGGTCTAGAATTTCC
GAACCCGTTGTTGCTGCTTTCATAGCCGGAGGAGTAGCGGGTGCAGTGTC
GAGGACACTTGTATCACCACTCGAACGTCTCAAAATCCTTCTCCAGATTC
AGAGTGTCGGCAGAGAGGAGTACAAATTATCAATATGGAGAGCTCTCGTC
AAAATCGGAAAGGAAGAGGGATGGAAAGGCTTCATGCGCGGAAATGGTAC
AAATTGTATTCGCATCATTCCTTATTCGGCGGTTCAATTCGGCAGCTATA
ATTTTTACAAAAAGTTCGCGGAATCTTCGCCAAATGCCGAGTTGTCAGCC
ATGCAGCGTCTTCTTTGTGGTGCCGCTGCCGGCATCACGTCTGTGACAAT
CACCTACCCTCTTGATATTGTCAGAACTCGACTCTCCATCCAGTCAGCGT
CATTTGAAGCTCTCAGTCACCGAGGGGTTGGCGAGCAGTTACCGGGCATG
TTTACCACCATGGTATTGATATATAGAAACGAAGGCGGCATCGTAGGTCT
TTACCGTGGCATTATACCTACTGTTGCTGGTGTCGCCCCTTATGTCGGCC
TCAACTTCATGACGTATGAATCTGTCCGCAAGTATTTGACACCTGAAGGC
GATGCGACACCAGGACCCCTGCGTAAACTACTTGCCGGTGCAGTGTCCGG
CGCAGTAGCACAGACATGCACATACCCATTCGATGTCCTACGACGCCGCT
TTCAGATTAACACGATGTCTGGGATGGGATATCAATATGCATCAATCATG
GACGCCGTAAAGGCCATTGTGGCACAAGAGGGCTTGCGGGGCCTGTTCAA
AGGAATCGTGCCAAATCTTCTTAAAGTGGCTCCCAGTATGGCTAGTAGTT
GGCTCAGCTTCGAGTTGACCCGGGACTTTCTAGTGAGTTTGGAGGAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_32890ATCC64974_32890Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32890-T1ATCC64974_32890-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32890-T1.exon1ATCC64974_32890-T1.exon1Aspergillus niger N402exon
ATCC64974_32890-T1.exon2ATCC64974_32890-T1.exon2Aspergillus niger N402exon
ATCC64974_32890-T1.exon3ATCC64974_32890-T1.exon3Aspergillus niger N402exon
ATCC64974_32890-T1.exon4ATCC64974_32890-T1.exon4Aspergillus niger N402exon
ATCC64974_32890-T1.exon5ATCC64974_32890-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_32890-T1.cdsATCC64974_32890-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:2015102..2016401 +
Powered by Drupal