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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:2045313..2047196- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_32990-T1 ID=ATCC64974_32990-T1|Name=ATCC64974_32990-T1|organism=Aspergillus niger N402|type=mRNA|length=1884bp|location=Sequence derived from alignment at OGUI01000004.1:2045313..2047196- (Aspergillus niger N402)
ATGTTGGATCTCTTCCCCTCTACAACCCTCACCAAGTACCACCCGGTGCC
GTCACATTTCCTATCCCCTGGTACTAGCTCTGCTACGAAAACAAGTAATA
CTAATGTGCGTGCGCTGCTACAGTGCCAGATCTGTCGTCTACGGAAAACG
AGATGTAACGGAGCCCGCCCAAGATGCCAGCTCTGCGTAGACCTGGATGC
AGATTGTGTCTATCGTGAGCCGGGCATCAAACTAGATGCCGGTGACAAAC
TGATTATCGAAAAGCTGAACAGAATAGAAGTCTTACTTCAGTCGAAGTTT
GCAGACCCCATCGGCCAGTCTCCCCTGTCATCGAATTCTTCCACGGCTGC
CAACCTTGTCCAAATTAGTAGCGATGATGCTGTCAGTCTCGCCAACATAC
CTACCAGGACAATCGCGGTGGGTCTTGGATCATGGGCAAATCCACCGACA
AGCATCTCAACTATGCCCAGAGTACATACGACACCGGCTTTGCACCTTCT
ACAATGGCCTCTCATTCGAGAACTGGTCGCTGTTCCTTATGATCCTCATA
CACTTCTACAGCTAGAAATGGCTCGTGAGCCACTTCGGCTCGAACCTCCT
GTGAGCTTAGATTTATCAAACGCACTTACTCACGCTCGACTTTTTTTCGA
GCGCGTAAATGTTTGGTACGCTTGTGTCAACCCATTGACGTGGCCTCGCT
ATTACAAGATGGCTCTTTCTCGGGACTTCGAGAGAGGGCCTGAAAGCTGC
GTTGTACTCTTGGTTTTGGCACTGGGCAGTGCCAGTCAATATGGAAGTAT
ATCTTGCCTTTCCGCAGATGAGGAACTTCCAGGACTATCATATTTCTCCG
CAGCTTGGACCCTTTTGCCGGCTGTTATGACGCGCAATTCGGTGCTTGCA
GCGCAATGTGTCATCTTGGCATCTGCATATTTATTTTACATGGTCAGGCC
CCTTGAGGCCTGGACGCTACTATCAAATGCCAGCATGAAATTACAATTAC
TCTTAGGTAACCCCTCTCGTGTTCCGGGGCAATGGAAGGAGCTGAGTACA
AGAGTGTACTGGAACACCTTACTATTTGAAAGTGATTTGCTTGCCGAATT
AGACCTACCACACTCGGGGATTGTGCATTTTGAAGAGCTCGTCGATCTCC
CTGGGGGCTTTGAACCGGAAGATGAAGAAGATGAAGAAGACGAAGGAAGC
ATACGAATTGAAGAGAAACTAGTAGATGCGATGATAGGTCAGGATGAGCT
CTGGTATTTCTTGGCTGAAATTGCCCTAAGAAGGCTGCTCAACAGAGTCA
GTCATATGATCTACCAAAAAGACAGCATCTTGACACTCGCATCTCTCGGT
CCTATCGCCTCAGAGCTAGATTTCCAGCTGTCTCAATGGTATGAAAGCCT
TCCTCAGCCTGTCCGGTTTCCTCTATCTGGGGGCCCAACTTTAAGCCCCA
TTCAGACAGTTTTAAGGCTTCGCTACTTTGCCTGCCGTACAATAATATAT
CGGCCTTACATCCTGGCGGTCTTCCAGAATGAGTATGCATGCAGTGACCC
GACAGTAAAAGACTGCTGCCTGCGGTGCTTGGACGCGACATTGAATCAAC
TCGAGCATATAGACAGACATCGTGAAGGTCACCTGCCGTACCTCTGGCAA
GGTGCCCTTTCCATGGTCTCTCAGGCGTTGTTAATCATGGGGGCAACCAT
GTCACCGACTCTCTCATCGCTGTTGCCTCCAGCGACTCAGCTAGACGGTA
TCATATCTGGCGTCATAACGGAGGTTGGCAGATATGCGCGGCTTGCACCA
AGTCTAAAGTTATCTGCCGAGATCATTCGTGATGCGGAAAAGAGACGCCA
GGTGTCCCTCGCGTCAGCGGCCAGACGAGGTTGA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:2045313..2047196- >ATCC64974_32990-T1 ID=ATCC64974_32990-T1|Name=ATCC64974_32990-T1|organism=Aspergillus niger N402|type=CDS|length=1884bp|location=Sequence derived from alignment at OGUI01000004.1:2045313..2047196- (Aspergillus niger N402)
ATGTTGGATCTCTTCCCCTCTACAACCCTCACCAAGTACCACCCGGTGCC
GTCACATTTCCTATCCCCTGGTACTAGCTCTGCTACGAAAACAAGTAATA
CTAATGTGCGTGCGCTGCTACAGTGCCAGATCTGTCGTCTACGGAAAACG
AGATGTAACGGAGCCCGCCCAAGATGCCAGCTCTGCGTAGACCTGGATGC
AGATTGTGTCTATCGTGAGCCGGGCATCAAACTAGATGCCGGTGACAAAC
TGATTATCGAAAAGCTGAACAGAATAGAAGTCTTACTTCAGTCGAAGTTT
GCAGACCCCATCGGCCAGTCTCCCCTGTCATCGAATTCTTCCACGGCTGC
CAACCTTGTCCAAATTAGTAGCGATGATGCTGTCAGTCTCGCCAACATAC
CTACCAGGACAATCGCGGTGGGTCTTGGATCATGGGCAAATCCACCGACA
AGCATCTCAACTATGCCCAGAGTACATACGACACCGGCTTTGCACCTTCT
ACAATGGCCTCTCATTCGAGAACTGGTCGCTGTTCCTTATGATCCTCATA
CACTTCTACAGCTAGAAATGGCTCGTGAGCCACTTCGGCTCGAACCTCCT
GTGAGCTTAGATTTATCAAACGCACTTACTCACGCTCGACTTTTTTTCGA
GCGCGTAAATGTTTGGTACGCTTGTGTCAACCCATTGACGTGGCCTCGCT
ATTACAAGATGGCTCTTTCTCGGGACTTCGAGAGAGGGCCTGAAAGCTGC
GTTGTACTCTTGGTTTTGGCACTGGGCAGTGCCAGTCAATATGGAAGTAT
ATCTTGCCTTTCCGCAGATGAGGAACTTCCAGGACTATCATATTTCTCCG
CAGCTTGGACCCTTTTGCCGGCTGTTATGACGCGCAATTCGGTGCTTGCA
GCGCAATGTGTCATCTTGGCATCTGCATATTTATTTTACATGGTCAGGCC
CCTTGAGGCCTGGACGCTACTATCAAATGCCAGCATGAAATTACAATTAC
TCTTAGGTAACCCCTCTCGTGTTCCGGGGCAATGGAAGGAGCTGAGTACA
AGAGTGTACTGGAACACCTTACTATTTGAAAGTGATTTGCTTGCCGAATT
AGACCTACCACACTCGGGGATTGTGCATTTTGAAGAGCTCGTCGATCTCC
CTGGGGGCTTTGAACCGGAAGATGAAGAAGATGAAGAAGACGAAGGAAGC
ATACGAATTGAAGAGAAACTAGTAGATGCGATGATAGGTCAGGATGAGCT
CTGGTATTTCTTGGCTGAAATTGCCCTAAGAAGGCTGCTCAACAGAGTCA
GTCATATGATCTACCAAAAAGACAGCATCTTGACACTCGCATCTCTCGGT
CCTATCGCCTCAGAGCTAGATTTCCAGCTGTCTCAATGGTATGAAAGCCT
TCCTCAGCCTGTCCGGTTTCCTCTATCTGGGGGCCCAACTTTAAGCCCCA
TTCAGACAGTTTTAAGGCTTCGCTACTTTGCCTGCCGTACAATAATATAT
CGGCCTTACATCCTGGCGGTCTTCCAGAATGAGTATGCATGCAGTGACCC
GACAGTAAAAGACTGCTGCCTGCGGTGCTTGGACGCGACATTGAATCAAC
TCGAGCATATAGACAGACATCGTGAAGGTCACCTGCCGTACCTCTGGCAA
GGTGCCCTTTCCATGGTCTCTCAGGCGTTGTTAATCATGGGGGCAACCAT
GTCACCGACTCTCTCATCGCTGTTGCCTCCAGCGACTCAGCTAGACGGTA
TCATATCTGGCGTCATAACGGAGGTTGGCAGATATGCGCGGCTTGCACCA
AGTCTAAAGTTATCTGCCGAGATCATTCGTGATGCGGAAAAGAGACGCCA
GGTGTCCCTCGCGTCAGCGGCCAGACGAGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_32990-T1 | ATCC64974_32990-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:2045313..2047196 - |
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