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ATCC64974_34340-T1, ATCC64974_34340-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_34340-T1
Unique NameATCC64974_34340-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:361508..362134-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_34340-T1 ID=ATCC64974_34340-T1|Name=ATCC64974_34340-T1|organism=Aspergillus niger N402|type=mRNA|length=627bp|location=Sequence derived from alignment at OGUI01000005.1:361508..362134- (Aspergillus niger N402)
ATGCTACCAACTCCTTTGTCGCCTCGAATAAACCTCGATCCTAATGTGGA
TGATACTATCATTAGTGTTAATATCACGAATGAGTGCATCGCTGCTTATA
AAGAGCTTCTATACAGAAGGGGGGCAGATAAACCTGCATTCGTTATCTAC
AAGATATCCGACGACGAACGCTCTATCGTCGTGGAAGAAAGCTCCCCGGA
GAAGAACTACGAGGCATTCCTCCAAAAGCTTACATCCGCACATGATAGTG
ACAGGAAACCTGCACCTCGATATGCAATATATGACGTGGAGTATGACTTG
CTTGAAGACGGTAGGAGGTAATTGAGAGGATCTCCGGAAGTAGATAGAGC
AATATGGGTATGTCGTGCTAACCTTCGTCAGAGCGACAATTGTCTTTATC
AGCTGGATGCCCGATGTGACGTCTACCCGGGTAGGTCATCGCGCTTCTAA
AGCTTTAACGTTTATCTGAGTCCCCACTGACACGACGGTTAGATCCGTAT
GCTCTATGCTTCTACCAAGGAGCAGCTCCGAAAGGCTCTCGATGTCAAAG
TATCCATCCATGCTGATAATTTGCATGATATTGAATGGAAGACGGTGTTA
AAAGAAGCCAGTGGTGGGCGACTCTAA
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Coding sequence (CDS) from alignment at OGUI01000005.1:361508..362134-

>ATCC64974_34340-T1 ID=ATCC64974_34340-T1|Name=ATCC64974_34340-T1|organism=Aspergillus niger N402|type=CDS|length=1503bp|location=Sequence derived from alignment at OGUI01000005.1:361508..362134- (Aspergillus niger N402)
ATCCGTATGCTCTATGCTTCTACCAAGGAGCAGCTCCGAAAGGCTCTCGA
TGTCAAAGTATCCATCCATGCTGATAATTTGCATGATATTGAATGGAAGA
CGGTGTTAAAAGAAGCCAGTGGTGGGCGACTCTAAAGCGACAATTGTCTT
TATCAGCTGGATGCCCGATGTGACGTCTACCCGGATGCTACCAACTCCTT
TGTCGCCTCGAATAAACCTCGATCCTAATGTGGATGATACTATCATTAGT
GTTAATATCACGAATGAGTGCATCGCTGCTTATAAAGAGCTTCTATACAG
AAGGGGGGCAGATAAACCTGCATTCGTTATCTACAAGATATCCGACGACG
AACGCTCTATCGTCGTGGAAGAAAGCTCCCCGGAGAAGAACTACGAGGCA
TTCCTCCAAAAGCTTACATCCGCACATGATAGTGACAGGAAACCTGCACC
TCGATATGCAATATATGACGTGGAGTATGACTTGCTTGAAGACGGTAGGA
GATCCGTATGCTCTATGCTTCTACCAAGGAGCAGCTCCGAAAGGCTCTCG
ATGTCAAAGTATCCATCCATGCTGATAATTTGCATGATATTGAATGGAAG
ACGGTGTTAAAAGAAGCCAGTGGTGGGCGACTCTAAAGCGACAATTGTCT
TTATCAGCTGGATGCCCGATGTGACGTCTACCCGGATGCTACCAACTCCT
TTGTCGCCTCGAATAAACCTCGATCCTAATGTGGATGATACTATCATTAG
TGTTAATATCACGAATGAGTGCATCGCTGCTTATAAAGAGCTTCTATACA
GAAGGGGGGCAGATAAACCTGCATTCGTTATCTACAAGATATCCGACGAC
GAACGCTCTATCGTCGTGGAAGAAAGCTCCCCGGAGAAGAACTACGAGGC
ATTCCTCCAAAAGCTTACATCCGCACATGATAGTGACAGGAAACCTGCAC
CTCGATATGCAATATATGACGTGGAGTATGACTTGCTTGAAGACGGTAGG
AGATCCGTATGCTCTATGCTTCTACCAAGGAGCAGCTCCGAAAGGCTCTC
GATGTCAAAGTATCCATCCATGCTGATAATTTGCATGATATTGAATGGAA
GACGGTGTTAAAAGAAGCCAGTGGTGGGCGACTCTAAAGCGACAATTGTC
TTTATCAGCTGGATGCCCGATGTGACGTCTACCCGGATGCTACCAACTCC
TTTGTCGCCTCGAATAAACCTCGATCCTAATGTGGATGATACTATCATTA
GTGTTAATATCACGAATGAGTGCATCGCTGCTTATAAAGAGCTTCTATAC
AGAAGGGGGGCAGATAAACCTGCATTCGTTATCTACAAGATATCCGACGA
CGAACGCTCTATCGTCGTGGAAGAAAGCTCCCCGGAGAAGAACTACGAGG
CATTCCTCCAAAAGCTTACATCCGCACATGATAGTGACAGGAAACCTGCA
CCTCGATATGCAATATATGACGTGGAGTATGACTTGCTTGAAGACGGTAG
GAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_34340ATCC64974_34340Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34340-T1ATCC64974_34340-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34340-T1.cdsATCC64974_34340-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_34340-T1.exon3ATCC64974_34340-T1.exon3Aspergillus niger N402exon
ATCC64974_34340-T1.exon2ATCC64974_34340-T1.exon2Aspergillus niger N402exon
ATCC64974_34340-T1.exon1ATCC64974_34340-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR017904
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:361508..362134 -
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