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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000005.1:461985..463147+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_34550-T1 ID=ATCC64974_34550-T1|Name=ATCC64974_34550-T1|organism=Aspergillus niger N402|type=mRNA|length=1163bp|location=Sequence derived from alignment at OGUI01000005.1:461985..463147+ (Aspergillus niger N402)
ATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAGGT
ACCCCACCCATCCCATACCCACCACCACCACCGCCAGACCCAACATAACT
AACTTCCACCACCAGAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAA
ACCCGACAATTTCACTGACACGAGCTTCAAATCCAAGAGTAAACACCCCC
CAAGAATCCCCACCACCCACCACACTCCGTGGTTAACATAAGAGACAAAA
ACCAGGTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCAGCA
CCACCCACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGAC
ACCCAGCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGC
CCCCACCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCTCCCCACCC
TCTCCCCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTC
AAGCTCCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAG
CCTAATGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCC
GCGTCACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAG
GCCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCT
CTCCGTGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCGAGTAATC
GGGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTT
TTGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGA
TGAGATGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCC
CGATTGTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTAT
GTGTATTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTA
TGAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTC
CTGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGA
CGGGCGTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGGTGGA
TTGGGAGGGTTAA back to topCoding sequence (CDS) from alignment at OGUI01000005.1:461985..463147+ >ATCC64974_34550-T1 ID=ATCC64974_34550-T1|Name=ATCC64974_34550-T1|organism=Aspergillus niger N402|type=CDS|length=3087bp|location=Sequence derived from alignment at OGUI01000005.1:461985..463147+ (Aspergillus niger N402)
ATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAGAA
ACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAAACCCGACAATTTCACTG
ACACGAGCTTCAAATCCAAGAGTATAACCCTAACCCAACAATCCCTAACC
CTGCACGCCCCCAGCACCACCCACCAATTCACCCACCACGTCTCCCTCCT
CAACTCCAAATCCGACACCCAGCGCCGAGACTCCCTCGCGCATCTAACCA
CCCATCTCACCTCCGCCCCCACCACCCAACCCCTCCCCATCCCCGTAAGC
ACCCTCCTCCCCACCCTCTCCCCCCTAATCCTCGACGCCAGCACAACCGT
GCGCACCCAGCTCCTCAAGCTCCTCCGCACCCTGCCCCCAGCCGACGTGG
AAGACCACGTCGCCAGCCTAATGCCCTACGTGCGCGCCGGCATGACCCAC
CTGGCCGCCGACATCCGCGTCACCGCCGTGGATGTCCTCTCGTGGCTGGT
CGAGATCGCCGGCGAGGCCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGA
CCCTGAATTGCTTTCTCTCCGTGCTGGGTTGGCATACTGAGGAGAGCTCC
AAGTGGTCGAGTAATCGGGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAA
GCCCATGGTGAAGGTTTTGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGA
TTGGGGAGGATGGTGATGAGATGGAGGTGGATGAGGGTGGTGGGAGTGGG
ACTGGTGTTGGGTTCCCGATTGTGCAGACGGAGGTGCATATGGTGCCTAA
GTCGGCGCAGCCCTATGTGTATTTGAATTTGTTTGGGGCGCCGAGGGATG
AGGAAGGGGAGATGTATGAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAG
GGACGGTTTTTGGTTCCTGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGA
TGGCGGGGAGGTTGGACGGGCGTCGTCGGCTGTGAGTAAGGTGTTGAAGG
AGGCTAGGGGGGTGGATTGGGAGGGTTAAATGGGCTCCAGCTCCAAAAAG
AAGAAGGAGAAGCAGAAGGACTTCCAGAAACCCAAGCTCAAAGTCGGCAA
AGCCAAAGCCAAACCCGACAATTTCACTGACACGAGCTTCAAATCCAAGA
GTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCAGCACCACC
CACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGACACCCA
GCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGCCCCCA
CCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCTCCCCACCCTCTCC
CCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTCAAGCT
CCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAGCCTAA
TGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCCGCGTC
ACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAGGCCGT
GGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCTCTCCG
TGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCGAGTAATCGGGCA
GCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTTTTGGG
GGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGATGAGA
TGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCCCGATT
GTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTATGTGTA
TTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTATGAGA
CCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTCCTGTT
GAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGACGGGC
GTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGGTGGATTGGG
AGGGTTAAATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGAC
TTCCAGAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAAACCCGACAA
TTTCACTGACACGAGCTTCAAATCCAAGAGTATAACCCTAACCCAACAAT
CCCTAACCCTGCACGCCCCCAGCACCACCCACCAATTCACCCACCACGTC
TCCCTCCTCAACTCCAAATCCGACACCCAGCGCCGAGACTCCCTCGCGCA
TCTAACCACCCATCTCACCTCCGCCCCCACCACCCAACCCCTCCCCATCC
CCGTAAGCACCCTCCTCCCCACCCTCTCCCCCCTAATCCTCGACGCCAGC
ACAACCGTGCGCACCCAGCTCCTCAAGCTCCTCCGCACCCTGCCCCCAGC
CGACGTGGAAGACCACGTCGCCAGCCTAATGCCCTACGTGCGCGCCGGCA
TGACCCACCTGGCCGCCGACATCCGCGTCACCGCCGTGGATGTCCTCTCG
TGGCTGGTCGAGATCGCCGGCGAGGCCGTGGTCTCGTGCGCCGGCGGCTG
GATCAAGACCCTGAATTGCTTTCTCTCCGTGCTGGGTTGGCATACTGAGG
AGAGCTCCAAGTGGTCGAGTAATCGGGCAGCGTTTGGGAAGGCCGGCGCG
AAGGGGAAGCCCATGGTGAAGGTTTTGGGGGTGCTGGCGGAGTTTTTGGA
GGCTGGGATTGGGGAGGATGGTGATGAGATGGAGGTGGATGAGGGTGGTG
GGAGTGGGACTGGTGTTGGGTTCCCGATTGTGCAGACGGAGGTGCATATG
GTGCCTAAGTCGGCGCAGCCCTATGTGTATTTGAATTTGTTTGGGGCGCC
GAGGGATGAGGAAGGGGAGATGTATGAGACCAGGGAGGAGAGGTTCCGTG
TGTTTAAGGGACGGTTTTTGGTTCCTGTTGAGCGCGGGTTGGAGAGTGCG
AGGCAGGATGGCGGGGAGGTTGGACGGGCGTCGTCGGCTGTGAGTAAGGT
GTTGAAGGAGGCTAGGGGGGTGGATTGGGAGGGTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_34550-T1 | ATCC64974_34550-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR024679 |
| DBxref | PFAM:PF12333 |
| Product | rRNA processing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000005.1 | supercontig | OGUI01000005.1:461985..463147 + |
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