You are here

Home

ATCC64974_37210-T1, ATCC64974_37210-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_37210-T1
Unique NameATCC64974_37210-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:1301050..1303101-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_37210-T1 ID=ATCC64974_37210-T1|Name=ATCC64974_37210-T1|organism=Aspergillus niger N402|type=mRNA|length=2052bp|location=Sequence derived from alignment at OGUI01000005.1:1301050..1303101- (Aspergillus niger N402)
ATGACTTCCTACCAGCCATTCCAATGCATGGTTTGTCTACGCCGTTTCAC
TCGACATGAGAACCTCAAACGACACGCAGCACTTCATTCCCGCTCTCGAA
AGGAAATCACCTTGCCGTGTGACTTGTGCCAGGCTACCTTTTCGCGTCCG
GACTTGCGCCATCGCCATATGAAGAGGAAACATGCAGAGCACGAGCAAAG
ACGAGCGACGAAGAGGCCAAAGCAAAGGGATAGCTATGCTACCCTATGCC
AGGATACTGGCCAGCATCGTGGGCAACTGCAGAATGTCGATGACCTGCAG
TTAGATAGGTCTTGTTGGACGTCTGATCTTTCGCAAATACACTACGAGGA
TGGACATGACCCAGATGCAGGAGGAACCAGCACTGCGTCCAGCACATCAC
CCATAGAAAACAGCGATCGTATCCAGTCTGTTCCAGGTAATCCGACGCAA
CATATACCAATGGACGAGTCTCGTTTGCTAGATGCGTTAGAACTGGAGCG
TAGCCTGTTACGCGAAACATCACTTCCCCAACCAACCGATCAACTCAGCA
CCCAGCCGCTCGCGATATCCAATCTACAGTCTCCGTCGGACATTGACCTC
GGCGACCTCAGCTTTCCCAAAGATCTCTCTGTTATCCCTATTGCGCCCGA
GAGCACCCAGCCCCAAAACAGCTGGTTTCCTTCCGCCTCACAAATCCGCG
AGGGCTGCAGCTTATTCTTCACCCATGTCTCGCACTTTCTTCCATTTCTA
CACCACCCAACATTCGACCCCAGTGCCATACCCTCCCACCTCCTCCTCGC
CATGCTCTCCCTCTCATACCAATACGGCGAAGACCCGGAATGCGATGCCC
GCACGGGCACGGGCACAAGCCTCTCCACCCGCTGCTACCTCCGCGCCCGC
TCCAGCCTCTCCTCCAGCAACCACCCTAACTCTACCATCACCGACCACCT
CTCCCTAGTGCAAACCTACCTCCTCCTCCAAATCTGCGCCATGATGTACC
TCTGCGGCTCCGACTCGACCCAAGGCCTCCAAATGCACGCGACCATGATA
TCCCTCGCGCGCTCCACAGGCCTCATGCAGCCCATAACCACCGAATGTGC
ACACACCTTGGACCTCGACTCCCTGTGGAAAGAATTCATCAAAGCCGAAT
CCCACAAACGGACCCTCTTCGCCGTTCACCAAATCGACGCACTCTGGTAC
CAACTCCTCTCCATCCCACGCGCCATCTCCCACCTCGAAATCAAACACGA
TCTGCCCTGTCCAGAAACCCACTGGACCGCCCCCTCCGCCGCCCAATGGG
CCCATCTCCAACTCATCTCCCAACAACAACATCATAAACACCCAACCAGT
ATGCGCTACGACGACGCAGTCCGGCACTTCCTCTCCTCATCTACAGATTC
CACATCTTCGATCCCCCCCTTCGACCCCTACGGCGCCATCAACATCACCC
ACTTCCTGATCTCCAGCGCGCGCGAAATCTCCGGCTGGTCTACCATGACC
GGCATGCTGAGCATGGAACGGTTCTCCGCTCTACGGTCGTCTCTCCTGTC
TTTGGGAGTGTTTCTTTCCCCAACACCAACACCAACACCGACGCCCTCTA
CTACCTATAACGCTAAATCCGCCCACACCACCGCAACCTGGCAAACAGCC
ATGATCGAGCTACAGATGTGGTCTCCCAGCCACACAGGCGGCATCGTCAA
AGCCAGTATCGACACCATGCTCCAGCAGGCGACGGAGTTGGCGCCCTCGG
CGTGTGAGTTCCTGTGTGAGGAGACAGCGAAGGCGTTCCAGCCGCATGTG
GATTGGTTTCTGACCTATTTGGAGGAGGGGGATGTGGAGGGAGAGGCGCC
GTGGGTGACACTGTATGCGTATAAGGCGTTTTTGGTCGCGTGGCAGTTGG
TTAGAGGGGGTGTGCCGGGGGCGATGGGGGTGGTGGGAGTGGGGGATGGG
GATGTGCGCGGTGCGGTGGAGTGGGCTAGGAGGGTGTTTGCTAGGAGGGA
GAGGTGGGTTATTGGGAGGTTGGTTTTGGGGTGTTTGGGGGGTTTAGATT
GA
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:1301050..1303101-

>ATCC64974_37210-T1 ID=ATCC64974_37210-T1|Name=ATCC64974_37210-T1|organism=Aspergillus niger N402|type=CDS|length=2052bp|location=Sequence derived from alignment at OGUI01000005.1:1301050..1303101- (Aspergillus niger N402)
ATGACTTCCTACCAGCCATTCCAATGCATGGTTTGTCTACGCCGTTTCAC
TCGACATGAGAACCTCAAACGACACGCAGCACTTCATTCCCGCTCTCGAA
AGGAAATCACCTTGCCGTGTGACTTGTGCCAGGCTACCTTTTCGCGTCCG
GACTTGCGCCATCGCCATATGAAGAGGAAACATGCAGAGCACGAGCAAAG
ACGAGCGACGAAGAGGCCAAAGCAAAGGGATAGCTATGCTACCCTATGCC
AGGATACTGGCCAGCATCGTGGGCAACTGCAGAATGTCGATGACCTGCAG
TTAGATAGGTCTTGTTGGACGTCTGATCTTTCGCAAATACACTACGAGGA
TGGACATGACCCAGATGCAGGAGGAACCAGCACTGCGTCCAGCACATCAC
CCATAGAAAACAGCGATCGTATCCAGTCTGTTCCAGGTAATCCGACGCAA
CATATACCAATGGACGAGTCTCGTTTGCTAGATGCGTTAGAACTGGAGCG
TAGCCTGTTACGCGAAACATCACTTCCCCAACCAACCGATCAACTCAGCA
CCCAGCCGCTCGCGATATCCAATCTACAGTCTCCGTCGGACATTGACCTC
GGCGACCTCAGCTTTCCCAAAGATCTCTCTGTTATCCCTATTGCGCCCGA
GAGCACCCAGCCCCAAAACAGCTGGTTTCCTTCCGCCTCACAAATCCGCG
AGGGCTGCAGCTTATTCTTCACCCATGTCTCGCACTTTCTTCCATTTCTA
CACCACCCAACATTCGACCCCAGTGCCATACCCTCCCACCTCCTCCTCGC
CATGCTCTCCCTCTCATACCAATACGGCGAAGACCCGGAATGCGATGCCC
GCACGGGCACGGGCACAAGCCTCTCCACCCGCTGCTACCTCCGCGCCCGC
TCCAGCCTCTCCTCCAGCAACCACCCTAACTCTACCATCACCGACCACCT
CTCCCTAGTGCAAACCTACCTCCTCCTCCAAATCTGCGCCATGATGTACC
TCTGCGGCTCCGACTCGACCCAAGGCCTCCAAATGCACGCGACCATGATA
TCCCTCGCGCGCTCCACAGGCCTCATGCAGCCCATAACCACCGAATGTGC
ACACACCTTGGACCTCGACTCCCTGTGGAAAGAATTCATCAAAGCCGAAT
CCCACAAACGGACCCTCTTCGCCGTTCACCAAATCGACGCACTCTGGTAC
CAACTCCTCTCCATCCCACGCGCCATCTCCCACCTCGAAATCAAACACGA
TCTGCCCTGTCCAGAAACCCACTGGACCGCCCCCTCCGCCGCCCAATGGG
CCCATCTCCAACTCATCTCCCAACAACAACATCATAAACACCCAACCAGT
ATGCGCTACGACGACGCAGTCCGGCACTTCCTCTCCTCATCTACAGATTC
CACATCTTCGATCCCCCCCTTCGACCCCTACGGCGCCATCAACATCACCC
ACTTCCTGATCTCCAGCGCGCGCGAAATCTCCGGCTGGTCTACCATGACC
GGCATGCTGAGCATGGAACGGTTCTCCGCTCTACGGTCGTCTCTCCTGTC
TTTGGGAGTGTTTCTTTCCCCAACACCAACACCAACACCGACGCCCTCTA
CTACCTATAACGCTAAATCCGCCCACACCACCGCAACCTGGCAAACAGCC
ATGATCGAGCTACAGATGTGGTCTCCCAGCCACACAGGCGGCATCGTCAA
AGCCAGTATCGACACCATGCTCCAGCAGGCGACGGAGTTGGCGCCCTCGG
CGTGTGAGTTCCTGTGTGAGGAGACAGCGAAGGCGTTCCAGCCGCATGTG
GATTGGTTTCTGACCTATTTGGAGGAGGGGGATGTGGAGGGAGAGGCGCC
GTGGGTGACACTGTATGCGTATAAGGCGTTTTTGGTCGCGTGGCAGTTGG
TTAGAGGGGGTGTGCCGGGGGCGATGGGGGTGGTGGGAGTGGGGGATGGG
GATGTGCGCGGTGCGGTGGAGTGGGCTAGGAGGGTGTTTGCTAGGAGGGA
GAGGTGGGTTATTGGGAGGTTGGTTTTGGGGTGTTTGGGGGGTTTAGATT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_37210ATCC64974_37210Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_37210-T1.cdsATCC64974_37210-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_37210-T1.exon1ATCC64974_37210-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_37210-T1ATCC64974_37210-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR013087
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:1301050..1303101 -
Powered by Drupal