You are here

Home

ATCC64974_38030-T1, ATCC64974_38030-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_38030-T1
Unique NameATCC64974_38030-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000005.1:1551622..1553139+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_38030-T1 ID=ATCC64974_38030-T1|Name=ATCC64974_38030-T1|organism=Aspergillus niger N402|type=mRNA|length=1518bp|location=Sequence derived from alignment at OGUI01000005.1:1551622..1553139+ (Aspergillus niger N402)
ATGGCTGCCAGCAATGACCTCCGGGGCTGGGTCATGAGCGCCGTGTCGGG
CGTGGGTAAGTCTACCTTCTGTATAGTATTTAGTTTCACTAGCTAACATA
GTCCAGCTTGTGTCTTGGGGTCGGCTGTCATTTGTGTGGATCTTGTTTTA
CGGCGATTGTCTCGCCGTAAAAGCTTCCAGATTGTCCATAACAATGGCTT
CTTATCTGCGTCTCTGAGTCTGAGCGCGGGCGTTATGGTATGTCTCTTTG
ACCAGTTGACCCTAATGTTGCTAGCATGCTGACCGCGCTAGCTTTACACT
TCTCTCTATAGCATGCTGCCTACTTCTCATCGGTACCTGACTCGGGCTGG
CTTGTCCCCCTCGCTCGCTGCATACGTGCTTATCGGTCTCTTTCTGGCGG
GCGCGGTCGTCATCCGTTTGGCATCGGCACTATTGCATCGCTACATACCG
TCACATGTCGTCGATTGTGCTCATACCCATGAGCCACACCCCACCTCTGG
TCATGAACACGGGGGCAAGCCAGACGGCCATTCACACTCCCACGGCCCTA
ACCACCTGAATGAGCGAACTCCTCTTTTGACGCACAAGTCTTCCCCGGCC
ACTGTGACCGTCCCTGCTGCTGGAGACGACCCAGGCGCACTTCTGCGAAG
GGAATCCCTGCGTATCCGCTTCACACGACGCCTCAGTCGTTTGGTTGGCG
GAGTCAAGTCACAATGCGACGAGAATGGCCCTTGTTTTGGCTTTTCGCAG
GCGTGCGGGCACGAATGCACCAAGACCCTCGAGGGACCGGAAATCTCTGT
CCTGGATGACGGCACCGTGCGCCCGCCGCTGCCGCACCCCCACAGCATAT
CCGTGCAAGTGGACTCAGCACAATTGGATGATCTTGAGGCAAACCTACCA
TCCTCGCAAATTCGACCTCAAGAGGCGAGTTCCTCTTCGTCCCGTACTGG
GCTTCTTGACGACCAGGATGTGGCATCTGAGGACGGAACTAAGCCGCCAC
CCAATCCCCAACACCATCACCATGTGCCACAGAACGCCTTTCTCTCCATC
GGTCTGCAGACATCGATGGCGATTGCTCTGCACAAGTTGCCGGAGGGGTT
TATCACCTACGCCACGAACCATGCGAGCCCGACTCTAGGCCTCACGGTTT
TCTTGGCGCTTTTCATCCACAACATCAGCGAAGGATTCGCTATGGCCTTA
CCTCTGTATCTCGCGCTGCATTCGCGCGGCTGGGCGATGTTCTGGTCAAG
TTTGCTAGGTGGTATCAGCCAACCCGCAGGCGCTGCGCTGGCAGCTCTCT
GGATCTGGGGTGCTCGGCGTGCTAATGGTGACGACACCGCTGGCCCGTCC
TGGGGTGTCTACGGCGGTATGTTTGCCGCGACGGCGGGAGTTATGATCTC
GGTTGCTCTGCAGCTGTTCAGCGAAGGCCTTACCCTAACTCACAATCGGG
GATTGTGCACTGGGTTCGCTATCGGAGGAATGGTCCTGATGGGGCTCAGT
TTCGCCCTGACCGCATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000005.1:1551622..1553139+

>ATCC64974_38030-T1 ID=ATCC64974_38030-T1|Name=ATCC64974_38030-T1|organism=Aspergillus niger N402|type=CDS|length=4239bp|location=Sequence derived from alignment at OGUI01000005.1:1551622..1553139+ (Aspergillus niger N402)
ATGGCTGCCAGCAATGACCTCCGGGGCTGGGTCATGAGCGCCGTGTCGGG
CGTGGCTTGTGTCTTGGGGTCGGCTGTCATTTGTGTGGATCTTGTTTTAC
GGCGATTGTCTCGCCGTAAAAGCTTCCAGATTGTCCATAACAATGGCTTC
TTATCTGCGTCTCTGAGTCTGAGCGCGGGCGTTATGCTTTACACTTCTCT
CTATAGCATGCTGCCTACTTCTCATCGGTACCTGACTCGGGCTGGCTTGT
CCCCCTCGCTCGCTGCATACGTGCTTATCGGTCTCTTTCTGGCGGGCGCG
GTCGTCATCCGTTTGGCATCGGCACTATTGCATCGCTACATACCGTCACA
TGTCGTCGATTGTGCTCATACCCATGAGCCACACCCCACCTCTGGTCATG
AACACGGGGGCAAGCCAGACGGCCATTCACACTCCCACGGCCCTAACCAC
CTGAATGAGCGAACTCCTCTTTTGACGCACAAGTCTTCCCCGGCCACTGT
GACCGTCCCTGCTGCTGGAGACGACCCAGGCGCACTTCTGCGAAGGGAAT
CCCTGCGTATCCGCTTCACACGACGCCTCAGTCGTTTGGTTGGCGGAGTC
AAGTCACAATGCGACGAGAATGGCCCTTGTTTTGGCTTTTCGCAGGCGTG
CGGGCACGAATGCACCAAGACCCTCGAGGGACCGGAAATCTCTGTCCTGG
ATGACGGCACCGTGCGCCCGCCGCTGCCGCACCCCCACAGCATATCCGTG
CAAGTGGACTCAGCACAATTGGATGATCTTGAGGCAAACCTACCATCCTC
GCAAATTCGACCTCAAGAGGCGAGTTCCTCTTCGTCCCGTACTGGGCTTC
TTGACGACCAGGATGTGGCATCTGAGGACGGAACTAAGCCGCCACCCAAT
CCCCAACACCATCACCATGTGCCACAGAACGCCTTTCTCTCCATCGGTCT
GCAGACATCGATGGCGATTGCTCTGCACAAGTTGCCGGAGGGGTTTATCA
CCTACGCCACGAACCATGCGAGCCCGACTCTAGGCCTCACGGTTTTCTTG
GCGCTTTTCATCCACAACATCAGCGAAGGATTCGCTATGGCCTTACCTCT
GTATCTCGCGCTGCATTCGCGCGGCTGGGCGATGTTCTGGTCAAGTTTGC
TAGGTGGTATCAGCCAACCCGCAGGCGCTGCGCTGGCAGCTCTCTGGATC
TGGGGTGCTCGGCGTGCTAATGGTGACGACACCGCTGGCCCGTCCTGGGG
TGTCTACGGCGGTATGTTTGCCGCGACGGCGGGAGTTATGATCTCGGTTG
CTCTGCAGCTGTTCAGCGAAGGCCTTACCCTAACTCACAATCGGGGATTG
TGCACTGGGTTCGCTATCGGAGGAATGGTCCTGATGGGGCTCAGTTTCGC
CCTGACCGCATAGATGGCTGCCAGCAATGACCTCCGGGGCTGGGTCATGA
GCGCCGTGTCGGGCGTGGCTTGTGTCTTGGGGTCGGCTGTCATTTGTGTG
GATCTTGTTTTACGGCGATTGTCTCGCCGTAAAAGCTTCCAGATTGTCCA
TAACAATGGCTTCTTATCTGCGTCTCTGAGTCTGAGCGCGGGCGTTATGC
TTTACACTTCTCTCTATAGCATGCTGCCTACTTCTCATCGGTACCTGACT
CGGGCTGGCTTGTCCCCCTCGCTCGCTGCATACGTGCTTATCGGTCTCTT
TCTGGCGGGCGCGGTCGTCATCCGTTTGGCATCGGCACTATTGCATCGCT
ACATACCGTCACATGTCGTCGATTGTGCTCATACCCATGAGCCACACCCC
ACCTCTGGTCATGAACACGGGGGCAAGCCAGACGGCCATTCACACTCCCA
CGGCCCTAACCACCTGAATGAGCGAACTCCTCTTTTGACGCACAAGTCTT
CCCCGGCCACTGTGACCGTCCCTGCTGCTGGAGACGACCCAGGCGCACTT
CTGCGAAGGGAATCCCTGCGTATCCGCTTCACACGACGCCTCAGTCGTTT
GGTTGGCGGAGTCAAGTCACAATGCGACGAGAATGGCCCTTGTTTTGGCT
TTTCGCAGGCGTGCGGGCACGAATGCACCAAGACCCTCGAGGGACCGGAA
ATCTCTGTCCTGGATGACGGCACCGTGCGCCCGCCGCTGCCGCACCCCCA
CAGCATATCCGTGCAAGTGGACTCAGCACAATTGGATGATCTTGAGGCAA
ACCTACCATCCTCGCAAATTCGACCTCAAGAGGCGAGTTCCTCTTCGTCC
CGTACTGGGCTTCTTGACGACCAGGATGTGGCATCTGAGGACGGAACTAA
GCCGCCACCCAATCCCCAACACCATCACCATGTGCCACAGAACGCCTTTC
TCTCCATCGGTCTGCAGACATCGATGGCGATTGCTCTGCACAAGTTGCCG
GAGGGGTTTATCACCTACGCCACGAACCATGCGAGCCCGACTCTAGGCCT
CACGGTTTTCTTGGCGCTTTTCATCCACAACATCAGCGAAGGATTCGCTA
TGGCCTTACCTCTGTATCTCGCGCTGCATTCGCGCGGCTGGGCGATGTTC
TGGTCAAGTTTGCTAGGTGGTATCAGCCAACCCGCAGGCGCTGCGCTGGC
AGCTCTCTGGATCTGGGGTGCTCGGCGTGCTAATGGTGACGACACCGCTG
GCCCGTCCTGGGGTGTCTACGGCGGTATGTTTGCCGCGACGGCGGGAGTT
ATGATCTCGGTTGCTCTGCAGCTGTTCAGCGAAGGCCTTACCCTAACTCA
CAATCGGGGATTGTGCACTGGGTTCGCTATCGGAGGAATGGTCCTGATGG
GGCTCAGTTTCGCCCTGACCGCATAGATGGCTGCCAGCAATGACCTCCGG
GGCTGGGTCATGAGCGCCGTGTCGGGCGTGGCTTGTGTCTTGGGGTCGGC
TGTCATTTGTGTGGATCTTGTTTTACGGCGATTGTCTCGCCGTAAAAGCT
TCCAGATTGTCCATAACAATGGCTTCTTATCTGCGTCTCTGAGTCTGAGC
GCGGGCGTTATGCTTTACACTTCTCTCTATAGCATGCTGCCTACTTCTCA
TCGGTACCTGACTCGGGCTGGCTTGTCCCCCTCGCTCGCTGCATACGTGC
TTATCGGTCTCTTTCTGGCGGGCGCGGTCGTCATCCGTTTGGCATCGGCA
CTATTGCATCGCTACATACCGTCACATGTCGTCGATTGTGCTCATACCCA
TGAGCCACACCCCACCTCTGGTCATGAACACGGGGGCAAGCCAGACGGCC
ATTCACACTCCCACGGCCCTAACCACCTGAATGAGCGAACTCCTCTTTTG
ACGCACAAGTCTTCCCCGGCCACTGTGACCGTCCCTGCTGCTGGAGACGA
CCCAGGCGCACTTCTGCGAAGGGAATCCCTGCGTATCCGCTTCACACGAC
GCCTCAGTCGTTTGGTTGGCGGAGTCAAGTCACAATGCGACGAGAATGGC
CCTTGTTTTGGCTTTTCGCAGGCGTGCGGGCACGAATGCACCAAGACCCT
CGAGGGACCGGAAATCTCTGTCCTGGATGACGGCACCGTGCGCCCGCCGC
TGCCGCACCCCCACAGCATATCCGTGCAAGTGGACTCAGCACAATTGGAT
GATCTTGAGGCAAACCTACCATCCTCGCAAATTCGACCTCAAGAGGCGAG
TTCCTCTTCGTCCCGTACTGGGCTTCTTGACGACCAGGATGTGGCATCTG
AGGACGGAACTAAGCCGCCACCCAATCCCCAACACCATCACCATGTGCCA
CAGAACGCCTTTCTCTCCATCGGTCTGCAGACATCGATGGCGATTGCTCT
GCACAAGTTGCCGGAGGGGTTTATCACCTACGCCACGAACCATGCGAGCC
CGACTCTAGGCCTCACGGTTTTCTTGGCGCTTTTCATCCACAACATCAGC
GAAGGATTCGCTATGGCCTTACCTCTGTATCTCGCGCTGCATTCGCGCGG
CTGGGCGATGTTCTGGTCAAGTTTGCTAGGTGGTATCAGCCAACCCGCAG
GCGCTGCGCTGGCAGCTCTCTGGATCTGGGGTGCTCGGCGTGCTAATGGT
GACGACACCGCTGGCCCGTCCTGGGGTGTCTACGGCGGTATGTTTGCCGC
GACGGCGGGAGTTATGATCTCGGTTGCTCTGCAGCTGTTCAGCGAAGGCC
TTACCCTAACTCACAATCGGGGATTGTGCACTGGGTTCGCTATCGGAGGA
ATGGTCCTGATGGGGCTCAGTTTCGCCCTGACCGCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_38030ATCC64974_38030Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38030-T1.exon1ATCC64974_38030-T1.exon1Aspergillus niger N402exon
ATCC64974_38030-T1.exon2ATCC64974_38030-T1.exon2Aspergillus niger N402exon
ATCC64974_38030-T1.exon3ATCC64974_38030-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38030-T1.cdsATCC64974_38030-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_38030-T1ATCC64974_38030-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000005.1supercontigOGUI01000005.1:1551622..1553139 +
Powered by Drupal