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ATCC64974_39270-T1, ATCC64974_39270-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_39270-T1
Unique NameATCC64974_39270-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:96087..97414-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_39270-T1 ID=ATCC64974_39270-T1|Name=ATCC64974_39270-T1|organism=Aspergillus niger N402|type=mRNA|length=1328bp|location=Sequence derived from alignment at OGUI01000006.1:96087..97414- (Aspergillus niger N402)
ATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCA
GCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAG
CCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCAGTATGC
CTTATCCCGTATTATTCGAAAAGTGAGATTTTTGGTCAGGTTCCATTGTT
GACCATGACTATAGGTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATG
GAAATGAATGGTGAGCTGCACCACTGCGGTGACTTGCAACTTAGGCTGAC
ATATAATGGATAATACTAGGTCATTCTGGTGAAGTTTTTGCGGTGCGGTT
TGATCCGACTGCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATCT
GTACGTGTTTCCTTTTATATAATAGTGTCTAGAGGGTGCAGGCTAATCAC
ACCGTCTACAACAGTGCTTTGGAACACATATGGACAGTGCGAGAACTATG
GTGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGC
GACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACTCGCTAGCTG
GGATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGCACGAGGAGA
TTATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGC
GCAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGC
TATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGG
AGGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACTATCCATGCT
TGGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGGACACACGGA
AACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCA
ACTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCG
GCAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAA
GAACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGG
GTAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATC
CTATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTC
ACCGAACAATGAGCCCATCAGTAAGTTACACCGGGTTTTGGAATATTCGT
TGGAAATACTAATATCCGTCTACAGTCGTCTCGGGATCGTCCGATAGAAC
GCTCATGCTCGGTGAACTTGGCAAGTGA
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Coding sequence (CDS) from alignment at OGUI01000006.1:96087..97414-

>ATCC64974_39270-T1 ID=ATCC64974_39270-T1|Name=ATCC64974_39270-T1|organism=Aspergillus niger N402|type=CDS|length=5400bp|location=Sequence derived from alignment at OGUI01000006.1:96087..97414- (Aspergillus niger N402)
TCGTCTCGGGATCGTCCGATAGAACGCTCATGCTCGGTGAACTTGGCAAG
TGATGCTTTGGAACACATATGGACAGTGCGAGAACTATGGTGCGCTATCA
GGTCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGCGACTCCAGAAC
GTTATTTTCCGCATCGGCCGACATGACACTCGCTAGCTGGGATCTCGAAA
CCGGACAAAGAATACGCCGGCACATTGGGCACGAGGAGATTATCAATTGT
CTAGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGCGCAAGTGACGA
CGGCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGCTATCGAATATT
TGGAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGGAGGCAGGTAAC
GAGATCTACAGTGGTGGTATCGATAACACTATCCATGCTTGGGATCTACG
GAAGAAGAGCATCGTCTACTCCATGGCTGGACACACGGAAACCATCACCT
CTCTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCAACTCACACGAC
TCGACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCGGCAAATCGACA
CGTCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAAGAACCTCATCC
GGGCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGGGTAGTGGTGAC
AGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATCCTATACAAGCT
CCCTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTCACCGAACAATG
AGCCCATCAGTCATTCTGGTGAAGTTTTTGCGGTGCGGTTTGATCCGACT
GCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATCTGTTCCCCGCA
CCAGCGGGCTTCAAGCACCGATTATGGAAATGAATGATGTCGGGGGAAAA
GCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCAGCTTGTCGTCAAGC
GAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAGCCATCGTCCAAAGC
TCGTCCCAAAATGGAGCTTTGATCCAATCATCGTCTCGGGATCGTCCGAT
AGAACGCTCATGCTCGGTGAACTTGGCAAGTGATGCTTTGGAACACATAT
GGACAGTGCGAGAACTATGGTGCGCTATCAGGTCACCGAGGAGCAGTTCT
TGACCTTCAATGGTCGCGCGACTCCAGAACGTTATTTTCCGCATCGGCCG
ACATGACACTCGCTAGCTGGGATCTCGAAACCGGACAAAGAATACGCCGG
CACATTGGGCACGAGGAGATTATCAATTGTCTAGACATAAGCAAAAGAGG
CCAGGAATTGCTGGTTAGCGCAAGTGACGACGGCTGCATAGGCATCTGGG
ATCCCCGGCAAAAGGATGCTATCGAATATTTGGAAACCGAGTTGCCCATC
ACGGCAGTGGCGCTTTCGGAGGCAGGTAACGAGATCTACAGTGGTGGTAT
CGATAACACTATCCATGCTTGGGATCTACGGAAGAAGAGCATCGTCTACT
CCATGGCTGGACACACGGAAACCATCACCTCTCTCGAAATTTCGCCGGAC
TCGCAAACTCTTCTTTCCAACTCACACGACTCGACCGTACGCACGTGGGA
TATCCGGCCGTTCGCGCCGGCAAATCGACACGTCAGGACGTTTGACGGTG
CGCCGGTCGGTTTGGAGAAGAACCTCATCCGGGCCAGTTGGGACCCGAGT
GGGGAGAAGATTGCGGCGGGTAGTGGTGACAGGAGTGTTGTGGTCTGGAA
CTCGAAGTCCGGCAAAATCCTATACAAGCTCCCTGGACATAAGGGGACCG
TCAATGACGTCCGGTTTTCACCGAACAATGAGCCCATCAGTCATTCTGGT
GAAGTTTTTGCGGTGCGGTTTGATCCGACTGCTCAGCACATTGCTTCAGG
CTCCATGGATCGATCTATCTGTTCCCCGCACCAGCGGGCTTCAAGCACCG
ATTATGGAAATGAATGATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCT
TTGGCTCATCGAACCAGCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGT
CTCAATGATAGCACAGCCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTT
GATCCAATCATCGTCTCGGGATCGTCCGATAGAACGCTCATGCTCGGTGA
ACTTGGCAAGTGATGCTTTGGAACACATATGGACAGTGCGAGAACTATGG
TGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGCG
ACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACTCGCTAGCTGG
GATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGCACGAGGAGAT
TATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGCG
CAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGCT
ATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGGA
GGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACTATCCATGCTT
GGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGGACACACGGAA
ACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCAA
CTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCGG
CAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAAG
AACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGGG
TAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATCC
TATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTCA
CCGAACAATGAGCCCATCAGTCATTCTGGTGAAGTTTTTGCGGTGCGGTT
TGATCCGACTGCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATCT
GTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATGGAAATGAATGATGT
CGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCAGCTT
GTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAGCCAT
CGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCATCGTCTCGGG
ATCGTCCGATAGAACGCTCATGCTCGGTGAACTTGGCAAGTGATGCTTTG
GAACACATATGGACAGTGCGAGAACTATGGTGCGCTATCAGGTCACCGAG
GAGCAGTTCTTGACCTTCAATGGTCGCGCGACTCCAGAACGTTATTTTCC
GCATCGGCCGACATGACACTCGCTAGCTGGGATCTCGAAACCGGACAAAG
AATACGCCGGCACATTGGGCACGAGGAGATTATCAATTGTCTAGACATAA
GCAAAAGAGGCCAGGAATTGCTGGTTAGCGCAAGTGACGACGGCTGCATA
GGCATCTGGGATCCCCGGCAAAAGGATGCTATCGAATATTTGGAAACCGA
GTTGCCCATCACGGCAGTGGCGCTTTCGGAGGCAGGTAACGAGATCTACA
GTGGTGGTATCGATAACACTATCCATGCTTGGGATCTACGGAAGAAGAGC
ATCGTCTACTCCATGGCTGGACACACGGAAACCATCACCTCTCTCGAAAT
TTCGCCGGACTCGCAAACTCTTCTTTCCAACTCACACGACTCGACCGTAC
GCACGTGGGATATCCGGCCGTTCGCGCCGGCAAATCGACACGTCAGGACG
TTTGACGGTGCGCCGGTCGGTTTGGAGAAGAACCTCATCCGGGCCAGTTG
GGACCCGAGTGGGGAGAAGATTGCGGCGGGTAGTGGTGACAGGAGTGTTG
TGGTCTGGAACTCGAAGTCCGGCAAAATCCTATACAAGCTCCCTGGACAT
AAGGGGACCGTCAATGACGTCCGGTTTTCACCGAACAATGAGCCCATCAG
TCATTCTGGTGAAGTTTTTGCGGTGCGGTTTGATCCGACTGCTCAGCACA
TTGCTTCAGGCTCCATGGATCGATCTATCTGTTCCCCGCACCAGCGGGCT
TCAAGCACCGATTATGGAAATGAATGATGTCGGGGGAAAAGCGACCTGCG
CAAGAAGCCTTTGGCTCATCGAACCAGCTTGTCGTCAAGCGAAAGAAGTC
CGACGCCGGTCTCAATGATAGCACAGCCATCGTCCAAAGCTCGTCCCAAA
ATGGAGCTTTGATCCAATCATCGTCTCGGGATCGTCCGATAGAACGCTCA
TGCTCGGTGAACTTGGCAAGTGATGCTTTGGAACACATATGGACAGTGCG
AGAACTATGGTGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAA
TGGTCGCGCGACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACT
CGCTAGCTGGGATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGC
ACGAGGAGATTATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTG
CTGGTTAGCGCAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCA
AAAGGATGCTATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGG
CGCTTTCGGAGGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACT
ATCCATGCTTGGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGG
ACACACGGAAACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTC
TTCTTTCCAACTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCG
TTCGCGCCGGCAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGG
TTTGGAGAAGAACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGA
TTGCGGCGGGTAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCC
GGCAAAATCCTATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGT
CCGGTTTTCACCGAACAATGAGCCCATCAGTCATTCTGGTGAAGTTTTTG
CGGTGCGGTTTGATCCGACTGCTCAGCACATTGCTTCAGGCTCCATGGAT
CGATCTATCTGTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATGGAAA
TGAATGATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATC
GAACCAGCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATA
GCACAGCCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_39270ATCC64974_39270Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39270-T1ATCC64974_39270-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39270-T1.cdsATCC64974_39270-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_39270-T1.exon5ATCC64974_39270-T1.exon5Aspergillus niger N402exon
ATCC64974_39270-T1.exon4ATCC64974_39270-T1.exon4Aspergillus niger N402exon
ATCC64974_39270-T1.exon3ATCC64974_39270-T1.exon3Aspergillus niger N402exon
ATCC64974_39270-T1.exon2ATCC64974_39270-T1.exon2Aspergillus niger N402exon
ATCC64974_39270-T1.exon1ATCC64974_39270-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:96087..97414 -
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