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ATCC64974_4100-T1, ATCC64974_4100-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_4100-T1
Unique NameATCC64974_4100-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1252373..1253204+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_4100-T1 ID=ATCC64974_4100-T1|Name=ATCC64974_4100-T1|organism=Aspergillus niger N402|type=mRNA|length=832bp|location=Sequence derived from alignment at OGUI01000001.1:1252373..1253204+ (Aspergillus niger N402)
ATGCCTCGTTCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAA
AAAGTCCCACAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAAT
GCATTGAGAAGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGC
AACACCTATCTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGGTTAGT
CTTCTCTCTCCCCAGCAACCCCCGCCTATCCCCAAGATGCCCCTCCACTC
CAACAACCATGCATGCAAACTAACCACCTGAGCAGTCTCTTCTTCGGCAA
AACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAAACGAAGCCG
CGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCCGTCGGTCTC
CTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTTCGAGTCCTT
CCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCCGGGCGTTCT
CGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATCCCCGTCTCC
GAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCGTAAACTCGG
TGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGTTGACGGAGG
GTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTGGATTCGAGG
CAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGAGTTCCATGT
TGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGGAGATTCTGG
AGAAGGATGAGGCTGGTATGGAGGTTGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1252373..1253204+

>ATCC64974_4100-T1 ID=ATCC64974_4100-T1|Name=ATCC64974_4100-T1|organism=Aspergillus niger N402|type=CDS|length=1482bp|location=Sequence derived from alignment at OGUI01000001.1:1252373..1253204+ (Aspergillus niger N402)
ATGCCTCGTTCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAA
AAAGTCCCACAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAAT
GCATTGAGAAGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGC
AACACCTATCTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGTCTCTT
CTTCGGCAAAACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAA
ACGAAGCCGCGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCC
GTCGGTCTCCTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTT
CGAGTCCTTCCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCC
GGGCGTTCTCGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATC
CCCGTCTCCGAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCG
TAAACTCGGTGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGT
TGACGGAGGGTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTG
GATTCGAGGCAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGA
GTTCCATGTTGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGG
AGATTCTGGAGAAGGATGAGGCTGGTATGGAGGTTGAGTAAATGCCTCGT
TCCAAGCGTGCCCGCGTCGTGCACGAGTCCAAGACCACCAAAAAGTCCCA
CAAGGAACAGACCCGTCGCCTGTACGCTAACATCCGGGAATGCATTGAGA
AGTACGACCACCTGTTCGTCTTCGGCGTGGACAACATGCGCAACACCTAT
CTGAAGGATGTCCGTACCGAGTTCGCCGATAGCCGTCTCTTCTTCGGCAA
AACCAAGGTCATGGCCGTCGCTCTGGGCCACAACCCCGAAAACGAAGCCG
CGCCCAACCTCCACAAACTCAACCCCTACCTCACCGGCGCCGTCGGTCTC
CTCTTCACCTCCCGCGACCCTCAATCCGTGACCGACTACTTCGAGTCCTT
CCGGCCGCTTGACTTCGCCCGCTCCGGGACAGTTAGTACCCGGGCGTTCT
CGATCCCCAACGGCCAGGTGTATTCGCGGGCCGGAGAGATCCCCGTCTCC
GAGGACGAGCCGCTCAGCCATACCATTGAGCCGGAGTTGCGTAAACTCGG
TGTCCCGACTCGGTTGGTTAAGGGCAAGGTCATGCTGGAGTTGACGGAGG
GTCAGGAGGGATTCCCCGTTTGCAGGGAGGGAGAGGTGCTGGATTCGAGG
CAGACGACGTTGTTGAAGATGTTTGGGGTTGTTATGGCTGAGTTCCATGT
TGCGTTGAAGGCTCATTGGACGAGGGAGTCTGGGGAGGTGGAGATTCTGG
AGAAGGATGAGGCTGGTATGGAGGTTGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000027ribosomal large subunit assembly
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_4100ATCC64974_4100Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4100-T1.exon1ATCC64974_4100-T1.exon1Aspergillus niger N402exon
ATCC64974_4100-T1.exon2ATCC64974_4100-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4100-T1.cdsATCC64974_4100-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4100-T1ATCC64974_4100-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000011.5
NoteantiSMASH:Cluster_10000011.4
NoteBUSCO:EOG09264W46
DBxrefInterPro:IPR033867
DBxrefInterPro:IPR040637
DBxrefInterPro:IPR001790
DBxrefPFAM:PF17777
DBxrefPFAM:PF00466
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1252373..1253204 +
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