You are here

Home

ATCC64974_41060-T1, ATCC64974_41060-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_41060-T1
Unique NameATCC64974_41060-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:661224..662166+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_41060-T1 ID=ATCC64974_41060-T1|Name=ATCC64974_41060-T1|organism=Aspergillus niger N402|type=mRNA|length=943bp|location=Sequence derived from alignment at OGUI01000006.1:661224..662166+ (Aspergillus niger N402)
ATGCCGGCATCACCGTGAGTTTGGCTTTCAAGCATGAAAAAGTCTTTATC
TGACGATTTGTTAGGATGATGTCGGCCGACGACGGGTCGCTCACCGGAGC
GGCCCAAGCCCCCCTCCTGACAACGGCGCGCACGGTGGCCACCCTCCGTC
AAGCGTCTATTCTTGGTGGGGTCCAGATGAGTCCAGTTGGCTCCTTCTCG
CGGATCCCAACGATATCTCTCTGGACCCCACCGAGCAATTGAAGCGGCAA
GACTTCCTCCTGGAATATGGGCACTACGCGGGCCGGGTTTGGGACTGCCT
GGTGAAGGCGTCCGTTGCGCTACGGCTTCAGATCACGTTGAGCGTCGTCC
AGTTCCGTGACAAGCTTACCCAAGGAGAATCCAATGATTCTTCCAGCGGA
CGGCAATATTGGATCCGCCTTCTCGAAAGATGCGTCGAGTATCTCAGAGA
GCAGGGCCTGGATATCGACCTTGACATGGCGAAGCTGGCAATTCTGGTCT
ATAGCAAGCGGGACCTCCTTTGTCGCGCTAGGATAGGGGATGTACCTGCC
TCGACCTCTGCCGCGCTGAGGAGAGAAATCGAGCAGGCCAACAACCACCT
CCCCGAGGTCCTGTCAAGGGATCAGTCCCGCAGCTATAGTACCCGGCAAC
GGATTCGGGCCTTCTACGGCAGTCCCCAAGACATGAAATACTCCAGACTT
GGCGCTGAGTCTGCCCCTGTCTTGCCGGAGCCCGACTGCAGACACCTGCC
CCGAGACGCACAGCGCCGTGCGTTCCAGAACCGTGTTTTCGCCGATCGCG
TTGACGCGACTTTCCAGACAATCAACGAGCGGATCCCGGTCACCTTTCGT
CCTATTCGTTGTCAAACGCGGACGAAGCGTAGTGTGTCGGATCCGCTCGA
ATACGTTCCTCGGAAAAGGCGTGCCCTTGGATCGCTGGACTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:661224..662166+

>ATCC64974_41060-T1 ID=ATCC64974_41060-T1|Name=ATCC64974_41060-T1|organism=Aspergillus niger N402|type=CDS|length=1698bp|location=Sequence derived from alignment at OGUI01000006.1:661224..662166+ (Aspergillus niger N402)
ATGCCGGCATCACCCCCCCCTCCTGACAACGGCGCGCACGGTGGCCACCC
TCCGTCAAGCGTCTATTCTTGGTGGGGTCCAGATGAGTCCAGTTGGCTCC
TTCTCGCGGATCCCAACGATATCTCTCTGGACCCCACCGAGCAATTGAAG
CGGCAAGACTTCCTCCTGGAATATGGGCACTACGCGGGCCGGGTTTGGGA
CTGCCTGGTGAAGGCGTCCGTTGCGCTACGGCTTCAGATCACGTTGAGCG
TCGTCCAGTTCCGTGACAAGCTTACCCAAGGAGAATCCAATGATTCTTCC
AGCGGACGGCAATATTGGATCCGCCTTCTCGAAAGATGCGTCGAGTATCT
CAGAGAGCAGGGCCTGGATATCGACCTTGACATGGCGAAGCTGGCAATTC
TGGTCTATAGCAAGCGGGACCTCCTTTGTCGCGCTAGGATAGGGGATGTA
CCTGCCTCGACCTCTGCCGCGCTGAGGAGAGAAATCGAGCAGGCCAACAA
CCACCTCCCCGAGGTCCTGTCAAGGGATCAGTCCCGCAGCTATAGTACCC
GGCAACGGATTCGGGCCTTCTACGGCAGTCCCCAAGACATGAAATACTCC
AGACTTGGCGCTGAGTCTGCCCCTGTCTTGCCGGAGCCCGACTGCAGACA
CCTGCCCCGAGACGCACAGCGCCGTGCGTTCCAGAACCGTGTTTTCGCCG
ATCGCGTTGACGCGACTTTCCAGACAATCAACGAGCGGATCCCGGTCACC
TTTCGTCCTATTCGTTGTCAAACGCGGACGAAGCGTAGTGTGTCGGATCC
GCTCGAATACGTTCCTCGGAAAAGGCGTGCCCTTGGATCGCTGGACTGAA
TGCCGGCATCACCCCCCCCTCCTGACAACGGCGCGCACGGTGGCCACCCT
CCGTCAAGCGTCTATTCTTGGTGGGGTCCAGATGAGTCCAGTTGGCTCCT
TCTCGCGGATCCCAACGATATCTCTCTGGACCCCACCGAGCAATTGAAGC
GGCAAGACTTCCTCCTGGAATATGGGCACTACGCGGGCCGGGTTTGGGAC
TGCCTGGTGAAGGCGTCCGTTGCGCTACGGCTTCAGATCACGTTGAGCGT
CGTCCAGTTCCGTGACAAGCTTACCCAAGGAGAATCCAATGATTCTTCCA
GCGGACGGCAATATTGGATCCGCCTTCTCGAAAGATGCGTCGAGTATCTC
AGAGAGCAGGGCCTGGATATCGACCTTGACATGGCGAAGCTGGCAATTCT
GGTCTATAGCAAGCGGGACCTCCTTTGTCGCGCTAGGATAGGGGATGTAC
CTGCCTCGACCTCTGCCGCGCTGAGGAGAGAAATCGAGCAGGCCAACAAC
CACCTCCCCGAGGTCCTGTCAAGGGATCAGTCCCGCAGCTATAGTACCCG
GCAACGGATTCGGGCCTTCTACGGCAGTCCCCAAGACATGAAATACTCCA
GACTTGGCGCTGAGTCTGCCCCTGTCTTGCCGGAGCCCGACTGCAGACAC
CTGCCCCGAGACGCACAGCGCCGTGCGTTCCAGAACCGTGTTTTCGCCGA
TCGCGTTGACGCGACTTTCCAGACAATCAACGAGCGGATCCCGGTCACCT
TTCGTCCTATTCGTTGTCAAACGCGGACGAAGCGTAGTGTGTCGGATCCG
CTCGAATACGTTCCTCGGAAAAGGCGTGCCCTTGGATCGCTGGACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_41060ATCC64974_41060Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41060-T1.exon1ATCC64974_41060-T1.exon1Aspergillus niger N402exon
ATCC64974_41060-T1.exon2ATCC64974_41060-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41060-T1.cdsATCC64974_41060-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_41060-T1ATCC64974_41060-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000061.3
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:661224..662166 +
Powered by Drupal