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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000006.1:1106707..1107766- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_42520-T1 ID=ATCC64974_42520-T1|Name=ATCC64974_42520-T1|organism=Aspergillus niger N402|type=mRNA|length=1060bp|location=Sequence derived from alignment at OGUI01000006.1:1106707..1107766- (Aspergillus niger N402)
ATGACCGACAGCGAAATAACGGGATTTCAATCCCACCACAAAGACTTCAC
AACAATCACCGGTCAAACCCCCTCCCTCGAACTACTCGCAGAACACCGCG
ACTACCCCTTTGCACACGAAGCCGGAATCTACATCCCGGAGACAAACAAC
CTCTGGATCACCAGCAACCGATGCGTCGACCCAAATGGCAGCAAAACCCA
GCAAAGAGTCTACATCACCCGCGTTGACCTGAATACCAGCCCCATCACCT
ACGAGGAGATCCCCACCGACATCCCCATGGGCAATGGCGGCATCAACTAC
GACAAAGATAGCATCCTCATCTGCGGGCAGGGGTCCATGACCCAGCCTAG
TGGGCTGTATCGCATGTCCATCACTGCCCCGTACACAACGGAACTGCTCA
AGGGCGACTTCTACGGCCGGCCCTTCAACTCGGTCAATGACGTGGTCGTG
CATACTGATGGCTCCATCTGGTTCACCGATCCCATTTACGGCTACAGGCA
TGAGTATCGTCCGGAACCGTGTCTACCGTGTCAGGTGTACCAGTGGTGTC
CGCGCGAAGGGACTATTCGCGCTATGGCTGATGGCTTTGGAATGCCGAAT
GGGATCTGTTTCTCCCCGGATGAGAAGACGGTTTATATCACGGATACGGA
CCGGTTGCATGGGGATGGTACGGTGTTTGATCATCGGGCATCTTCTATGT
ATGTCTTGTTTCATCCTATAGTGTTGTCGGGGTGTCTGCTAATTAGGGTG
TAGCTATGCCTTCGACGTGTCCACGATACATGGACAGCCATTCCTCACCA
ACCGTCGGCTCTTCGCCATGGCCGATCACGGTATCCCCGACGGTATTAAG
TGCGACCTCAATGGAAACGTATACAGTGGTTGCGGGGATGGAATCCATGT
GTGGTCCCCCGGGGGTGTTCTCCTCGGTCGCATCCTCATCGATGGCGGGG
TGGCCAACTTCTGTTTTGGCAGAAACGGGGAGATCTTTGCGCTCAATGAG
CACCGCCTATGGAGGGTCCAGCTCGGGGCTGGTGTCAAGGGGGCATTACT
TGGTCTGTAG back to topCoding sequence (CDS) from alignment at OGUI01000006.1:1106707..1107766- >ATCC64974_42520-T1 ID=ATCC64974_42520-T1|Name=ATCC64974_42520-T1|organism=Aspergillus niger N402|type=CDS|length=2010bp|location=Sequence derived from alignment at OGUI01000006.1:1106707..1107766- (Aspergillus niger N402)
CTATGCCTTCGACGTGTCCACGATACATGGACAGCCATTCCTCACCAACC
GTCGGCTCTTCGCCATGGCCGATCACGGTATCCCCGACGGTATTAAGTGC
GACCTCAATGGAAACGTATACAGTGGTTGCGGGGATGGAATCCATGTGTG
GTCCCCCGGGGGTGTTCTCCTCGGTCGCATCCTCATCGATGGCGGGGTGG
CCAACTTCTGTTTTGGCAGAAACGGGGAGATCTTTGCGCTCAATGAGCAC
CGCCTATGGAGGGTCCAGCTCGGGGCTGGTGTCAAGGGGGCATTACTTGG
TCTGTAGATGACCGACAGCGAAATAACGGGATTTCAATCCCACCACAAAG
ACTTCACAACAATCACCGGTCAAACCCCCTCCCTCGAACTACTCGCAGAA
CACCGCGACTACCCCTTTGCACACGAAGCCGGAATCTACATCCCGGAGAC
AAACAACCTCTGGATCACCAGCAACCGATGCGTCGACCCAAATGGCAGCA
AAACCCAGCAAAGAGTCTACATCACCCGCGTTGACCTGAATACCAGCCCC
ATCACCTACGAGGAGATCCCCACCGACATCCCCATGGGCAATGGCGGCAT
CAACTACGACAAAGATAGCATCCTCATCTGCGGGCAGGGGTCCATGACCC
AGCCTAGTGGGCTGTATCGCATGTCCATCACTGCCCCGTACACAACGGAA
CTGCTCAAGGGCGACTTCTACGGCCGGCCCTTCAACTCGGTCAATGACGT
GGTCGTGCATACTGATGGCTCCATCTGGTTCACCGATCCCATTTACGGCT
ACAGGCATGAGTATCGTCCGGAACCGTGTCTACCGTGTCAGGTGTACCAG
TGGTGTCCGCGCGAAGGGACTATTCGCGCTATGGCTGATGGCTTTGGAAT
GCCGAATGGGATCTGTTTCTCCCCGGATGAGAAGACGGTTTATATCACGG
ATACGGACCGGTTGCATGGGGATGGTACGGTGTTTGATCATCGGGCATCT
TCTATCTATGCCTTCGACGTGTCCACGATACATGGACAGCCATTCCTCAC
CAACCGTCGGCTCTTCGCCATGGCCGATCACGGTATCCCCGACGGTATTA
AGTGCGACCTCAATGGAAACGTATACAGTGGTTGCGGGGATGGAATCCAT
GTGTGGTCCCCCGGGGGTGTTCTCCTCGGTCGCATCCTCATCGATGGCGG
GGTGGCCAACTTCTGTTTTGGCAGAAACGGGGAGATCTTTGCGCTCAATG
AGCACCGCCTATGGAGGGTCCAGCTCGGGGCTGGTGTCAAGGGGGCATTA
CTTGGTCTGTAGATGACCGACAGCGAAATAACGGGATTTCAATCCCACCA
CAAAGACTTCACAACAATCACCGGTCAAACCCCCTCCCTCGAACTACTCG
CAGAACACCGCGACTACCCCTTTGCACACGAAGCCGGAATCTACATCCCG
GAGACAAACAACCTCTGGATCACCAGCAACCGATGCGTCGACCCAAATGG
CAGCAAAACCCAGCAAAGAGTCTACATCACCCGCGTTGACCTGAATACCA
GCCCCATCACCTACGAGGAGATCCCCACCGACATCCCCATGGGCAATGGC
GGCATCAACTACGACAAAGATAGCATCCTCATCTGCGGGCAGGGGTCCAT
GACCCAGCCTAGTGGGCTGTATCGCATGTCCATCACTGCCCCGTACACAA
CGGAACTGCTCAAGGGCGACTTCTACGGCCGGCCCTTCAACTCGGTCAAT
GACGTGGTCGTGCATACTGATGGCTCCATCTGGTTCACCGATCCCATTTA
CGGCTACAGGCATGAGTATCGTCCGGAACCGTGTCTACCGTGTCAGGTGT
ACCAGTGGTGTCCGCGCGAAGGGACTATTCGCGCTATGGCTGATGGCTTT
GGAATGCCGAATGGGATCTGTTTCTCCCCGGATGAGAAGACGGTTTATAT
CACGGATACGGACCGGTTGCATGGGGATGGTACGGTGTTTGATCATCGGG
CATCTTCTAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_42520-T1 | ATCC64974_42520-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013658 |
| DBxref | InterPro:IPR011042 |
| DBxref | PFAM:PF08450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000006.1 | supercontig | OGUI01000006.1:1106707..1107766 - |
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