You are here

Home

ATCC64974_42990-T1, ATCC64974_42990-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_42990-T1
Unique NameATCC64974_42990-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000006.1:1228416..1230070-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_42990-T1 ID=ATCC64974_42990-T1|Name=ATCC64974_42990-T1|organism=Aspergillus niger N402|type=mRNA|length=1655bp|location=Sequence derived from alignment at OGUI01000006.1:1228416..1230070- (Aspergillus niger N402)
ATGCCCGAGGCTAATACCGCTCTTGTGCAAAATGAGTCGAGCTCTGCCGC
ATTGGCGCATGACGGCACAATCGAGCAAGTGCAACTGCAGTTCCCGCAGG
CTGGCCGCTACAAACAGATTGCGGCCACCATTCAGCTCTCCACAGTCACG
CTGACAGCCAGCGTGCTAAATGGCCTGATCATAGTTGGTCTTCCGACCAT
AACCAAGGATCTGCAGCTTCCAGCTTCCTTGTCCCTCTGGCCGTCATCGG
TCGCGAGTCTTGCTACTGCCACGACACTTCTTTTAGCTGGTTCCATCGCT
GATACTATCGGTCCACGGTGGGTCGAAATTGTCGGATCGTTTGCTAGCGG
CGCATTGATGGTCGGCCAAGGACTGGCGCGGAATGGCGAGGAGTTAGTGA
CTCTTAGAGCTTTGCAAGGAGTTGGACTAGCTATGCATCTAGCCTCCTCG
ATATCTCTTCTGGGACAACTGCTGCCTCCGGGGAAGAGCCGTAATCTAGC
CTTCTCGTGCCTCGGGCTCAGCTTGCCCCTTGGCTTTTCGCTCGGGCTGG
TTGTTGGAGGACTCATGGTTGATAGGATTGGCTGGCGACTAGGCTGGTAC
ATATCCGGAGGCATGACTCTCTTCGTGTCTGTCATAGGCCTCTGGGCGTT
ACCATCAAATACTATCACTAGAGATGTGCACTATTTTCGCGCACTTGCAA
CAAGGGTGGACTGGGTGGGAGCTGCTCTCGGCTCTGCATTCTTGGCGCTA
CTCTGTTATCTCCTCGCGTAAGATACGGGCCAGCCCTAATTCTTCTTTCA
CCACTGACCAGGCTGACTATAGGATACTGAGCGTAACGCCATCGCGCATC
AAGTCCGCCCAATGTATTATAATTGTATGTCTGATTGCTCTTGCCCTACC
GGCATTCATTGCCTGGTCCCATTACCAGGTCAAAGTGGGAAGACCGGCCC
TTATTCCCAATATCGTGTGGAAGAAGAGATCATTTTCCAGTGTATGCGCT
CTAGTGGCGCTATCAAACGGAGTGCTGAATGCCATGGAGCTTTTCACCAG
TCTGTAGTAAGCGATCATCATGCCTATCAACCCGTGTTTGTGCTTGTTTT
TGACCCCGACACAGTTTCCAGGAGATTCAAGGTCTGTCAGCCATACAAGC
TTCCATTCGAATCCTGCCTAGTCTTGTCTCCGGTATCTTCATGAACCTGA
TAGTGGGCCTCTTTGTGCACCGAGTGCCCGCATTCTGGATTGTTACGGCG
GCCACAATTGTTTGTGCTGTGTCGCCTCTGCTTATGGCTCTCGTTCAGCC
TTCTACACCATACTGGGGCAATGCTTTCGTCGCCCAAGTCCTGCAGCCTG
TCAGCTTCGGTGCGCTCTACACGGTCGGACTCATAATAGTCACGGATTGT
TTTGCCGAAGACATGCAAGCCTTGGCTGGCGCCGTGTTTAACACCGCCTC
ACAGTTTGGTAACGCTATTGGATTAGCTGTGCTTCAGGTGATTTCGAATG
TTGTCTCCAAACATTCGGGTGACCAGGAAAATCTAGCCTTGATGGACGGG
TATCGCGCCAGCTTCTGGACAATGTTCGGATCGATGATTCTCTGCACTAT
TCTTGGTTTTTGGGGCCTGTACAAGGCTGGCAAGGTCGGTCTGAAACGGG
ATTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000006.1:1228416..1230070-

>ATCC64974_42990-T1 ID=ATCC64974_42990-T1|Name=ATCC64974_42990-T1|organism=Aspergillus niger N402|type=CDS|length=4626bp|location=Sequence derived from alignment at OGUI01000006.1:1228416..1230070- (Aspergillus niger N402)
TTTCCAGGAGATTCAAGGTCTGTCAGCCATACAAGCTTCCATTCGAATCC
TGCCTAGTCTTGTCTCCGGTATCTTCATGAACCTGATAGTGGGCCTCTTT
GTGCACCGAGTGCCCGCATTCTGGATTGTTACGGCGGCCACAATTGTTTG
TGCTGTGTCGCCTCTGCTTATGGCTCTCGTTCAGCCTTCTACACCATACT
GGGGCAATGCTTTCGTCGCCCAAGTCCTGCAGCCTGTCAGCTTCGGTGCG
CTCTACACGGTCGGACTCATAATAGTCACGGATTGTTTTGCCGAAGACAT
GCAAGCCTTGGCTGGCGCCGTGTTTAACACCGCCTCACAGTTTGGTAACG
CTATTGGATTAGCTGTGCTTCAGGTGATTTCGAATGTTGTCTCCAAACAT
TCGGGTGACCAGGAAAATCTAGCCTTGATGGACGGGTATCGCGCCAGCTT
CTGGACAATGTTCGGATCGATGATTCTCTGCACTATTCTTGGTTTTTGGG
GCCTGTACAAGGCTGGCAAGGTCGGTCTGAAACGGGATTAAGATACTGAG
CGTAACGCCATCGCGCATCAAGTCCGCCCAATGTATTATAATTGTATGTC
TGATTGCTCTTGCCCTACCGGCATTCATTGCCTGGTCCCATTACCAGGTC
AAAGTGGGAAGACCGGCCCTTATTCCCAATATCGTGTGGAAGAAGAGATC
ATTTTCCAGTGTATGCGCTCTAGTGGCGCTATCAAACGGAGTGCTGAATG
CCATGGAGCTTTTCACCAGTCTGTAATGCCCGAGGCTAATACCGCTCTTG
TGCAAAATGAGTCGAGCTCTGCCGCATTGGCGCATGACGGCACAATCGAG
CAAGTGCAACTGCAGTTCCCGCAGGCTGGCCGCTACAAACAGATTGCGGC
CACCATTCAGCTCTCCACAGTCACGCTGACAGCCAGCGTGCTAAATGGCC
TGATCATAGTTGGTCTTCCGACCATAACCAAGGATCTGCAGCTTCCAGCT
TCCTTGTCCCTCTGGCCGTCATCGGTCGCGAGTCTTGCTACTGCCACGAC
ACTTCTTTTAGCTGGTTCCATCGCTGATACTATCGGTCCACGGTGGGTCG
AAATTGTCGGATCGTTTGCTAGCGGCGCATTGATGGTCGGCCAAGGACTG
GCGCGGAATGGCGAGGAGTTAGTGACTCTTAGAGCTTTGCAAGGAGTTGG
ACTAGCTATGCATCTAGCCTCCTCGATATCTCTTCTGGGACAACTGCTGC
CTCCGGGGAAGAGCCGTAATCTAGCCTTCTCGTGCCTCGGGCTCAGCTTG
CCCCTTGGCTTTTCGCTCGGGCTGGTTGTTGGAGGACTCATGGTTGATAG
GATTGGCTGGCGACTAGGCTGGTACATATCCGGAGGCATGACTCTCTTCG
TGTCTGTCATAGGCCTCTGGGCGTTACCATCAAATACTATCACTAGAGAT
GTGCACTATTTTCGCGCACTTGCAACAAGGGTGGACTGGGTGGGAGCTGC
TCTCGGCTCTGCATTCTTGGCGCTACTCTGTTATCTCCTCGCTTTCCAGG
AGATTCAAGGTCTGTCAGCCATACAAGCTTCCATTCGAATCCTGCCTAGT
CTTGTCTCCGGTATCTTCATGAACCTGATAGTGGGCCTCTTTGTGCACCG
AGTGCCCGCATTCTGGATTGTTACGGCGGCCACAATTGTTTGTGCTGTGT
CGCCTCTGCTTATGGCTCTCGTTCAGCCTTCTACACCATACTGGGGCAAT
GCTTTCGTCGCCCAAGTCCTGCAGCCTGTCAGCTTCGGTGCGCTCTACAC
GGTCGGACTCATAATAGTCACGGATTGTTTTGCCGAAGACATGCAAGCCT
TGGCTGGCGCCGTGTTTAACACCGCCTCACAGTTTGGTAACGCTATTGGA
TTAGCTGTGCTTCAGGTGATTTCGAATGTTGTCTCCAAACATTCGGGTGA
CCAGGAAAATCTAGCCTTGATGGACGGGTATCGCGCCAGCTTCTGGACAA
TGTTCGGATCGATGATTCTCTGCACTATTCTTGGTTTTTGGGGCCTGTAC
AAGGCTGGCAAGGTCGGTCTGAAACGGGATTAAGATACTGAGCGTAACGC
CATCGCGCATCAAGTCCGCCCAATGTATTATAATTGTATGTCTGATTGCT
CTTGCCCTACCGGCATTCATTGCCTGGTCCCATTACCAGGTCAAAGTGGG
AAGACCGGCCCTTATTCCCAATATCGTGTGGAAGAAGAGATCATTTTCCA
GTGTATGCGCTCTAGTGGCGCTATCAAACGGAGTGCTGAATGCCATGGAG
CTTTTCACCAGTCTGTAATGCCCGAGGCTAATACCGCTCTTGTGCAAAAT
GAGTCGAGCTCTGCCGCATTGGCGCATGACGGCACAATCGAGCAAGTGCA
ACTGCAGTTCCCGCAGGCTGGCCGCTACAAACAGATTGCGGCCACCATTC
AGCTCTCCACAGTCACGCTGACAGCCAGCGTGCTAAATGGCCTGATCATA
GTTGGTCTTCCGACCATAACCAAGGATCTGCAGCTTCCAGCTTCCTTGTC
CCTCTGGCCGTCATCGGTCGCGAGTCTTGCTACTGCCACGACACTTCTTT
TAGCTGGTTCCATCGCTGATACTATCGGTCCACGGTGGGTCGAAATTGTC
GGATCGTTTGCTAGCGGCGCATTGATGGTCGGCCAAGGACTGGCGCGGAA
TGGCGAGGAGTTAGTGACTCTTAGAGCTTTGCAAGGAGTTGGACTAGCTA
TGCATCTAGCCTCCTCGATATCTCTTCTGGGACAACTGCTGCCTCCGGGG
AAGAGCCGTAATCTAGCCTTCTCGTGCCTCGGGCTCAGCTTGCCCCTTGG
CTTTTCGCTCGGGCTGGTTGTTGGAGGACTCATGGTTGATAGGATTGGCT
GGCGACTAGGCTGGTACATATCCGGAGGCATGACTCTCTTCGTGTCTGTC
ATAGGCCTCTGGGCGTTACCATCAAATACTATCACTAGAGATGTGCACTA
TTTTCGCGCACTTGCAACAAGGGTGGACTGGGTGGGAGCTGCTCTCGGCT
CTGCATTCTTGGCGCTACTCTGTTATCTCCTCGCTTTCCAGGAGATTCAA
GGTCTGTCAGCCATACAAGCTTCCATTCGAATCCTGCCTAGTCTTGTCTC
CGGTATCTTCATGAACCTGATAGTGGGCCTCTTTGTGCACCGAGTGCCCG
CATTCTGGATTGTTACGGCGGCCACAATTGTTTGTGCTGTGTCGCCTCTG
CTTATGGCTCTCGTTCAGCCTTCTACACCATACTGGGGCAATGCTTTCGT
CGCCCAAGTCCTGCAGCCTGTCAGCTTCGGTGCGCTCTACACGGTCGGAC
TCATAATAGTCACGGATTGTTTTGCCGAAGACATGCAAGCCTTGGCTGGC
GCCGTGTTTAACACCGCCTCACAGTTTGGTAACGCTATTGGATTAGCTGT
GCTTCAGGTGATTTCGAATGTTGTCTCCAAACATTCGGGTGACCAGGAAA
ATCTAGCCTTGATGGACGGGTATCGCGCCAGCTTCTGGACAATGTTCGGA
TCGATGATTCTCTGCACTATTCTTGGTTTTTGGGGCCTGTACAAGGCTGG
CAAGGTCGGTCTGAAACGGGATTAAGATACTGAGCGTAACGCCATCGCGC
ATCAAGTCCGCCCAATGTATTATAATTGTATGTCTGATTGCTCTTGCCCT
ACCGGCATTCATTGCCTGGTCCCATTACCAGGTCAAAGTGGGAAGACCGG
CCCTTATTCCCAATATCGTGTGGAAGAAGAGATCATTTTCCAGTGTATGC
GCTCTAGTGGCGCTATCAAACGGAGTGCTGAATGCCATGGAGCTTTTCAC
CAGTCTGTAATGCCCGAGGCTAATACCGCTCTTGTGCAAAATGAGTCGAG
CTCTGCCGCATTGGCGCATGACGGCACAATCGAGCAAGTGCAACTGCAGT
TCCCGCAGGCTGGCCGCTACAAACAGATTGCGGCCACCATTCAGCTCTCC
ACAGTCACGCTGACAGCCAGCGTGCTAAATGGCCTGATCATAGTTGGTCT
TCCGACCATAACCAAGGATCTGCAGCTTCCAGCTTCCTTGTCCCTCTGGC
CGTCATCGGTCGCGAGTCTTGCTACTGCCACGACACTTCTTTTAGCTGGT
TCCATCGCTGATACTATCGGTCCACGGTGGGTCGAAATTGTCGGATCGTT
TGCTAGCGGCGCATTGATGGTCGGCCAAGGACTGGCGCGGAATGGCGAGG
AGTTAGTGACTCTTAGAGCTTTGCAAGGAGTTGGACTAGCTATGCATCTA
GCCTCCTCGATATCTCTTCTGGGACAACTGCTGCCTCCGGGGAAGAGCCG
TAATCTAGCCTTCTCGTGCCTCGGGCTCAGCTTGCCCCTTGGCTTTTCGC
TCGGGCTGGTTGTTGGAGGACTCATGGTTGATAGGATTGGCTGGCGACTA
GGCTGGTACATATCCGGAGGCATGACTCTCTTCGTGTCTGTCATAGGCCT
CTGGGCGTTACCATCAAATACTATCACTAGAGATGTGCACTATTTTCGCG
CACTTGCAACAAGGGTGGACTGGGTGGGAGCTGCTCTCGGCTCTGCATTC
TTGGCGCTACTCTGTTATCTCCTCGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_42990ATCC64974_42990Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42990-T1ATCC64974_42990-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42990-T1.cdsATCC64974_42990-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_42990-T1.exon3ATCC64974_42990-T1.exon3Aspergillus niger N402exon
ATCC64974_42990-T1.exon2ATCC64974_42990-T1.exon2Aspergillus niger N402exon
ATCC64974_42990-T1.exon1ATCC64974_42990-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000006.1supercontigOGUI01000006.1:1228416..1230070 -
Powered by Drupal