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ATCC64974_4340-T1, ATCC64974_4340-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_4340-T1
Unique NameATCC64974_4340-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1322594..1324594-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_4340-T1 ID=ATCC64974_4340-T1|Name=ATCC64974_4340-T1|organism=Aspergillus niger N402|type=mRNA|length=2001bp|location=Sequence derived from alignment at OGUI01000001.1:1322594..1324594- (Aspergillus niger N402)
ATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCG
CCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCA
ACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAG
GCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAA
AATCATGGTCAGCGGCTTGGTGAGTACCCGTTATCTCTGCTCTATTGATA
AATGAACCGTTACTAACGTTTTTAGCCTTCCGATGTGAATGAGGCCAATA
TCAAGGTATGTTGATCGAAAGGCCTTGGCCTTGGGTTTCTATCGCCATGT
TTTCTTCTCGAAACCTTCGAGGCGCAACGGCTTTCGCGCGCGTTTCGATC
CTTGCCACGTTATCTATATATATTTTATATCACCGTCATGGATTCTTGGT
CTTCAGCATAGGCAGCAAACTCCATTGAAATCTTCGCATGCGGTAATTGC
ACGCTGGCACCCTGCGAGTCCGCCGAAGTTGGAGTTCTGCCGTAGTCTTG
CGAAAGGCGTGTTAGCTCGGGCGGATCTTCCAGCCATCCGCCTTTGAAGC
CACGCAGCAGACTGTGCCACAGATGATTGTTGAAACATACCATCTTTGAA
ACCAATCCGATTGGCTACACCCGTACAAAGTCCCACGTTTCGAGGTGTCG
GGCATCAGCGAGCGCATCAGCCTACCAGCAGTGACCGACTAGTTCGGCAG
GTGATCAACTGTCAAGCATCATGCTACCGGCGGTCGGTATGGGAAATGTT
TCAGTGTCGGGCAGGAAAGACGCATCTTCCCATATCACCTCCGTGAGACA
AATCGTGTCTTGTTCTCCCTATCATGGGCTGCTAGAGAGGTTCTAGGGAA
ACAGAACCATGGATTTGCCGCACACGTAGTCTTCGTGTTGTCTGTCCCCG
GGCGAAGGTTGCTGGCACACACAGCCCGTAGCTTTTGAGGCTAGCGCCTT
GTCTGGTTGCGAAAAGGTCGATGACGATTGCTGAGTGGGTTAGTTGGAAG
GGGGACACACGATACTGTGAAGGCTTTTGAGGGAGTTCATCGTTGTGGTT
CTTGGGATAAATGCTAGCAGCTCTGTGCTCTAGATATGACAGTGTCTCGG
TGTTCTGGAATGAACCGCCATGCACTGATTACTACTAACCGCCGCTGTGT
GCTCGCTGGTGCTCTTTGGTATCGCGTTTGAAGCCGGTGTCACGCGTTCT
TCGATGTTTTGGCTCTTCGGAATTCCTTGCGCCTTCTGCATTCTGTTGGC
TCGACATACTAATTTGGTCTCCTGGTATAGGAATACTTCACAAAGTCAGC
AGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAAACGGCACGAGCC
GTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCT
GCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACCCATGAAGGTGAG
CTTTTCACTAACCAATCACTATTCTTACGTATGGACACTAACAAATACTA
GATTGAGGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTA
AGCCTCTGGGCGAGCGCGTTGCGTAAGTGTCCTCTTCCATTGTCTTGTAC
TGGGGAATCATGACTAACCGCGATGAAGACAAACCAAGCCCCAACCGAAG
CCCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCG
TGCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGG
AGGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAAT
GCTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCA
GCCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCGTAA
GTTTTGTCAACGAGTTGTTGTGCGAACCAGAGCTAATAAACTATTTAGTA
A
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Coding sequence (CDS) from alignment at OGUI01000001.1:1322594..1324594-

>ATCC64974_4340-T1 ID=ATCC64974_4340-T1|Name=ATCC64974_4340-T1|organism=Aspergillus niger N402|type=CDS|length=4536bp|location=Sequence derived from alignment at OGUI01000001.1:1322594..1324594- (Aspergillus niger N402)
TAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTG
CTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGT
AACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGA
CTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCC
AAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGAC
CTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTCCCACGC
TCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATACTT
CACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAA
ACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACA
GCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACC
CATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTGCCAAGT
TGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGCGCTCGC
CGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCCTGTCCC
AGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCGGAAAGG
CTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATGGTCAGC
GGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGG
CTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGC
CGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGAT
GGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCA
ATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGC
GAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTC
CCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGA
ATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACA
ACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCC
GATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGG
CAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTG
CCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGC
GCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCC
TGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCG
GAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATG
GTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTA
CCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCT
AACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGC
TGAGATGGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGG
AGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACC
GGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGA
CGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCG
TTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCA
CCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGC
AAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGT
TGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGA
TGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGC
CAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAA
CGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGG
CGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAA
ATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTA
CCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGT
CGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCT
TGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCC
CTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCC
GCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGT
CGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCG
AGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCA
TGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTG
TTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACT
CCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATA
TCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGC
CGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGC
TGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTG
CCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAG
AGCAAAATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGC
CCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGT
GCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGA
GGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAATG
CTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAG
CCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGA
GGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTC
TGGGCGAGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGC
GAGTCATGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCG
ATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAA
TGGACTCCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGG
CCAATATCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTC
GTCAGCCGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAA
CAAGGCTGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCA
AGGCTGCCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCT
ACGGAGAGCAAAATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAAC
CGAAGCCCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAG
GGCCGTGCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGAC
TGTGGAGGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACG
AGAATGCTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCC
CAGCAGCCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTC
CATTGAGGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTA
AGCCTCTGGGCGAGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTG
TCAAGCGAGTCATGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATC
GCCTCGATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGA
CTTGAATGGACTCCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGA
ATGAGGCCAATATCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAG
ATCCTCGTCAGCCGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGC
TCCCAACAAGGCTGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGA
CCACCAAGGCTGCCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCG
GTCTCTACGGAGAGCAAAATCATGGTCAGCGGCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_4340ATCC64974_4340Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4340-T1ATCC64974_4340-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4340-T1.cdsATCC64974_4340-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_4340-T1.exon6ATCC64974_4340-T1.exon6Aspergillus niger N402exon
ATCC64974_4340-T1.exon5ATCC64974_4340-T1.exon5Aspergillus niger N402exon
ATCC64974_4340-T1.exon4ATCC64974_4340-T1.exon4Aspergillus niger N402exon
ATCC64974_4340-T1.exon3ATCC64974_4340-T1.exon3Aspergillus niger N402exon
ATCC64974_4340-T1.exon2ATCC64974_4340-T1.exon2Aspergillus niger N402exon
ATCC64974_4340-T1.exon1ATCC64974_4340-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR025715
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF13865
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1322594..1324594 -
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