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ATCC64974_43800-T1, ATCC64974_43800-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_43800-T1
Unique NameATCC64974_43800-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:203159..203887-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_43800-T1 ID=ATCC64974_43800-T1|Name=ATCC64974_43800-T1|organism=Aspergillus niger N402|type=mRNA|length=729bp|location=Sequence derived from alignment at OGUI01000007.1:203159..203887- (Aspergillus niger N402)
ATGAACCAGGAAGCTCGCAATATCAGCATTATCCAGGGCAACAACATCGC
CTTTATCAAAACGTATCCTGGAGGGTCTGGTTACGTCAAAGACGTCACCT
TCGAAAATTTCCGCTCTTTGAACAGCCTGTACGGATTGGACATCAACCAA
TACTGGCAAAACACATGGGAGCCTGATACCGGTTCCGTGACATTGAGCAA
CCTTGTCTTCAAGAACTTCTCAGGTAATCTCGGCTCGTGTATCCAGTGAA
TGCAGCCCTCGTACTGATGCACAAACATAGGATCGGTTGCCGATGGAGCA
CTCCGCCCGCCATTGTATCTGTTTGCAAGTGACTTGACATTTGCAACGAA
CGTCACCGTGGAGGAATTCTCTGTCTGGACTGAGACTGGTACAACAGTCG
TCAACAAGATCAGCAATATCTTCGGCACTGGGGATGATAGCTATGAAGAG
AATGATGGCATTGAGAGCCTCCAATCTGGAGAGTCGCCGTATACGTATAC
TAGCACCTATACTATTACGGCTTCTCCCACCAATTGGCAAGCTCCATCAA
CCCCAACCTGGGCTTTACCGAGCACTGGATATGGAAGTAAGTTCAACGAG
AATTGTTCTGGTTATTTTTACATAGCTAACTTATCTACAGCTGCGTCACC
TATTCCAGTCTATACTCCCGCACCTCTTTGGCGCCCTGGTGGAATTGACT
ATAACCTCCATTATTGGGGAAGCTTTTAG
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Coding sequence (CDS) from alignment at OGUI01000007.1:203159..203887-

>ATCC64974_43800-T1 ID=ATCC64974_43800-T1|Name=ATCC64974_43800-T1|organism=Aspergillus niger N402|type=CDS|length=1854bp|location=Sequence derived from alignment at OGUI01000007.1:203159..203887- (Aspergillus niger N402)
CTGCGTCACCTATTCCAGTCTATACTCCCGCACCTCTTTGGCGCCCTGGT
GGAATTGACTATAACCTCCATTATTGGGGAAGCTTTTAGGATCGGTTGCC
GATGGAGCACTCCGCCCGCCATTGTATCTGTTTGCAAGTGACTTGACATT
TGCAACGAACGTCACCGTGGAGGAATTCTCTGTCTGGACTGAGACTGGTA
CAACAGTCGTCAACAAGATCAGCAATATCTTCGGCACTGGGGATGATAGC
TATGAAGAGAATGATGGCATTGAGAGCCTCCAATCTGGAGAGTCGCCGTA
TACGTATACTAGCACCTATACTATTACGGCTTCTCCCACCAATTGGCAAG
CTCCATCAACCCCAACCTGGGCTTTACCGAGCACTGGATATGGAAATGAA
CCAGGAAGCTCGCAATATCAGCATTATCCAGGGCAACAACATCGCCTTTA
TCAAAACGTATCCTGGAGGGTCTGGTTACGTCAAAGACGTCACCTTCGAA
AATTTCCGCTCTTTGAACAGCCTGTACGGATTGGACATCAACCAATACTG
GCAAAACACATGGGAGCCTGATACCGGTTCCGTGACATTGAGCAACCTTG
TCTTCAAGAACTTCTCAGCTGCGTCACCTATTCCAGTCTATACTCCCGCA
CCTCTTTGGCGCCCTGGTGGAATTGACTATAACCTCCATTATTGGGGAAG
CTTTTAGGATCGGTTGCCGATGGAGCACTCCGCCCGCCATTGTATCTGTT
TGCAAGTGACTTGACATTTGCAACGAACGTCACCGTGGAGGAATTCTCTG
TCTGGACTGAGACTGGTACAACAGTCGTCAACAAGATCAGCAATATCTTC
GGCACTGGGGATGATAGCTATGAAGAGAATGATGGCATTGAGAGCCTCCA
ATCTGGAGAGTCGCCGTATACGTATACTAGCACCTATACTATTACGGCTT
CTCCCACCAATTGGCAAGCTCCATCAACCCCAACCTGGGCTTTACCGAGC
ACTGGATATGGAAATGAACCAGGAAGCTCGCAATATCAGCATTATCCAGG
GCAACAACATCGCCTTTATCAAAACGTATCCTGGAGGGTCTGGTTACGTC
AAAGACGTCACCTTCGAAAATTTCCGCTCTTTGAACAGCCTGTACGGATT
GGACATCAACCAATACTGGCAAAACACATGGGAGCCTGATACCGGTTCCG
TGACATTGAGCAACCTTGTCTTCAAGAACTTCTCAGCTGCGTCACCTATT
CCAGTCTATACTCCCGCACCTCTTTGGCGCCCTGGTGGAATTGACTATAA
CCTCCATTATTGGGGAAGCTTTTAGGATCGGTTGCCGATGGAGCACTCCG
CCCGCCATTGTATCTGTTTGCAAGTGACTTGACATTTGCAACGAACGTCA
CCGTGGAGGAATTCTCTGTCTGGACTGAGACTGGTACAACAGTCGTCAAC
AAGATCAGCAATATCTTCGGCACTGGGGATGATAGCTATGAAGAGAATGA
TGGCATTGAGAGCCTCCAATCTGGAGAGTCGCCGTATACGTATACTAGCA
CCTATACTATTACGGCTTCTCCCACCAATTGGCAAGCTCCATCAACCCCA
ACCTGGGCTTTACCGAGCACTGGATATGGAAATGAACCAGGAAGCTCGCA
ATATCAGCATTATCCAGGGCAACAACATCGCCTTTATCAAAACGTATCCT
GGAGGGTCTGGTTACGTCAAAGACGTCACCTTCGAAAATTTCCGCTCTTT
GAACAGCCTGTACGGATTGGACATCAACCAATACTGGCAAAACACATGGG
AGCCTGATACCGGTTCCGTGACATTGAGCAACCTTGTCTTCAAGAACTTC
TCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_43800ATCC64974_43800Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_43800-T1ATCC64974_43800-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_43800-T1.cdsATCC64974_43800-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_43800-T1.exon3ATCC64974_43800-T1.exon3Aspergillus niger N402exon
ATCC64974_43800-T1.exon2ATCC64974_43800-T1.exon2Aspergillus niger N402exon
ATCC64974_43800-T1.exon1ATCC64974_43800-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000071.3
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:203159..203887 -
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