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ATCC64974_44320-T1, ATCC64974_44320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_44320-T1
Unique NameATCC64974_44320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:339424..340383+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_44320-T1 ID=ATCC64974_44320-T1|Name=ATCC64974_44320-T1|organism=Aspergillus niger N402|type=mRNA|length=960bp|location=Sequence derived from alignment at OGUI01000007.1:339424..340383+ (Aspergillus niger N402)
ATGGTACGTGGCCGTCTCGCAATGTCAATTAAAAGCATCATTATCCCTCG
CTGGCGGGAGAGGAATTGTCCGGATGGCATCAGGAACGAGCAGCACTCTG
TATCCCTTGTTTGTTGACTGTCGTGGTCAACCTCGCGGATAACTGGTGTG
GTTGGATCCATTGAATTCCGGCCCCTCGTCGGCCCATCCAATCCCTTTGC
TCGTTTCCATGGTTCACTAGTAGTCGTGGCTGCTTGTTCGTCATCGGCAC
ACTTCATCTCCCTGTCTTCTTTCCATCCTCCATTTCATCTCTGATCTTTA
CTCTTCATCCCGGATTTTTGCACGTGTGATTTCACTTTCAAGATGTCTCG
CTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAAGGAAGCCT
TCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCGAGTCGCTA
GGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCGGAGATCGC
AGATTTGGAGAAGTCCATCGGTGGAGACTGTACGTTTTGACTTGCTCTGA
AATGGCTCATGTGTATCTAACACACTTGTGCGCAGTTGACTTCGAGTCGT
TCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGCCC
GAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGGTT
TATCGGTGTGGGACAGCTCCGATACAGTATGTGAAGCAGGATGGAGTTTA
CTGGATTGATACTGATCATGGCTACAGTCCTGACGAATCTCGGTGAGAAG
ATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGTTC
CGGCGAGATCAACTACACCGGTATGTTACACCATCTGATTGTTCACCATG
CCTTTGTGTTGGGTCAAGCTAACAGCAGCAGACCTCGTCCGCACCATCCT
GGCCAACTAA
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Coding sequence (CDS) from alignment at OGUI01000007.1:339424..340383+

>ATCC64974_44320-T1 ID=ATCC64974_44320-T1|Name=ATCC64974_44320-T1|organism=Aspergillus niger N402|type=CDS|length=2100bp|location=Sequence derived from alignment at OGUI01000007.1:339424..340383+ (Aspergillus niger N402)
ATGGCCTCGACCAACTACAAGGAAGCCTTCTCTCTCTTCGATAAGCGTGG
TACCGGCAAGGTCGCGCTCGAGTCGCTAGGCGACCTCCTGCGCGCATGCG
GTCAGAATCCTACTTTGGCGGAGATCGCAGATTTGGAGAAGTCCATCGGT
GGAGACTTTGACTTCGAGTCGTTCTTGAAGGTCCTCAACCGCCCTGGAGG
CTTCCGTGACCCTGGCGAGCCCGAAGAATACTGCCGCGGATTCCAGGTGT
TCGACAAGGACCTGACTGGGTTTATCGGTGTGGGACAGCTCCGATACATC
CTGACGAATCTCGGTGAGAAGATGTCGGATGAGGAGGTTGACGAGCTACT
CAAGGCCGTCGACACCAGTTCCGGCGAGATCAACTACACCGACCTCGTCC
GCACCATCCTGGCCAACTAAATGGCCTCGACCAACTACAAGGAAGCCTTC
TCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCGAGTCGCTAGG
CGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCGGAGATCGCAG
ATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTCGTTCTTGAAG
GTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGCCCGAAGAATA
CTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGGTTTATCGGTG
TGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAAGATGTCGGAT
GAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGTTCCGGCGAGAT
CAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAAATGGCCTCGA
CCAACTACAAGGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAG
GTCGCGCTCGAGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCC
TACTTTGGCGGAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTG
ACTTCGAGTCGTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGAC
CCTGGCGAGCCCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGA
CCTGACTGGGTTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATC
TCGGTGAGAAGATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTC
GACACCAGTTCCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCT
GGCCAACTAAATGGCCTCGACCAACTACAAGGAAGCCTTCTCTCTCTTCG
ATAAGCGTGGTACCGGCAAGGTCGCGCTCGAGTCGCTAGGCGACCTCCTG
CGCGCATGCGGTCAGAATCCTACTTTGGCGGAGATCGCAGATTTGGAGAA
GTCCATCGGTGGAGACTTTGACTTCGAGTCGTTCTTGAAGGTCCTCAACC
GCCCTGGAGGCTTCCGTGACCCTGGCGAGCCCGAAGAATACTGCCGCGGA
TTCCAGGTGTTCGACAAGGACCTGACTGGGTTTATCGGTGTGGGACAGCT
CCGATACATCCTGACGAATCTCGGTGAGAAGATGTCGGATGAGGAGGTTG
ACGAGCTACTCAAGGCCGTCGACACCAGTTCCGGCGAGATCAACTACACC
GACCTCGTCCGCACCATCCTGGCCAACTAAATGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGTT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CDC4ATCC64974_44320Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44320-T1ATCC64974_44320-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44320-T1.exon1ATCC64974_44320-T1.exon1Aspergillus niger N402exon
ATCC64974_44320-T1.exon2ATCC64974_44320-T1.exon2Aspergillus niger N402exon
ATCC64974_44320-T1.exon3ATCC64974_44320-T1.exon3Aspergillus niger N402exon
ATCC64974_44320-T1.exon4ATCC64974_44320-T1.exon4Aspergillus niger N402exon
ATCC64974_44320-T1.exon5ATCC64974_44320-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_44320-T1.cdsATCC64974_44320-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265591
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR002048
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
ProductSCF ubiquitin ligase complex subunit cdc4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:339424..340383 +
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